EWM28706.1, cds1962 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM28706.1 vs. NCBI_GenBank
Match: gi|585111129|gb|EWM28706.1| (mitochondrial carrier domain-containing protein [Nannochloropsis gaditana]) HSP 1 Score: 593.964 bits (1530), Expect = 0.000e+0 Identity = 289/289 (100.00%), Postives = 289/289 (100.00%), Query Frame = 0 Query: 1 MPLARRLMEFLFMLLLVEGDGLVAKIFFHNKLPTQLPCSTMACCRRNPAKNQGRKGGGNETEHAHKQSQQLCIRNQHHKSAEGGADFASSLDPSSKSTSPLDSITAFKPDILSPSSFILFALMAFYIVDACLCDLWLPPANAVDASLITEIDVAGILQKAGKKALGGGLSGAVASLVQLITLMWLRTTMQYQYRYGLPFAATVQQLYKEGGITRFYQGLPVALFQLPLSRFADVAANAFMIAALDSFESTRGLPLPLKSAFGSIAAGTWRLVLTPLDVVKTTLQVLFVM 289 MPLARRLMEFLFMLLLVEGDGLVAKIFFHNKLPTQLPCSTMACCRRNPAKNQGRKGGGNETEHAHKQSQQLCIRNQHHKSAEGGADFASSLDPSSKSTSPLDSITAFKPDILSPSSFILFALMAFYIVDACLCDLWLPPANAVDASLITEIDVAGILQKAGKKALGGGLSGAVASLVQLITLMWLRTTMQYQYRYGLPFAATVQQLYKEGGITRFYQGLPVALFQLPLSRFADVAANAFMIAALDSFESTRGLPLPLKSAFGSIAAGTWRLVLTPLDVVKTTLQVLFVM Sbjct: 1 MPLARRLMEFLFMLLLVEGDGLVAKIFFHNKLPTQLPCSTMACCRRNPAKNQGRKGGGNETEHAHKQSQQLCIRNQHHKSAEGGADFASSLDPSSKSTSPLDSITAFKPDILSPSSFILFALMAFYIVDACLCDLWLPPANAVDASLITEIDVAGILQKAGKKALGGGLSGAVASLVQLITLMWLRTTMQYQYRYGLPFAATVQQLYKEGGITRFYQGLPVALFQLPLSRFADVAANAFMIAALDSFESTRGLPLPLKSAFGSIAAGTWRLVLTPLDVVKTTLQVLFVM 289
BLAST of EWM28706.1 vs. NCBI_GenBank
Match: gi|873220207|emb|CEM36155.1| (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 172.17 bits (435), Expect = 5.277e-48 Identity = 81/136 (59.56%), Postives = 106/136 (77.94%), Query Frame = 0 Query: 150 EIDVAGILQKAGKKALGGGLSGAVASLVQLITLMWLRTTMQYQYRYGLPFAATVQQLYKEGGITRFYQGLPVALFQLPLSRFADVAANAFMIAALDSFESTRGLPLPLKSAFGSIAAGTWRLVLTPLDVVKTTLQV 285 ++DV ILQK+ K+A+GGGLSG+ AS++Q+ +LMWLRT+M YQY GLP T+ L+ EGG+ RFY+GLP AL Q PLS+F D AANA ++A LDSFEST GLPL +K+A S+AAG WR+V+ P+D KTT+QV Sbjct: 57 KVDVKTILQKSAKRAVGGGLSGSAASVLQVFSLMWLRTSMNYQYTTGLPLNTTLATLWSEGGVPRFYRGLPFALVQAPLSKFGDTAANAGVLALLDSFESTMGLPLFVKTASASVAAGLWRIVIFPVDTFKTTMQV 192
BLAST of EWM28706.1 vs. NCBI_GenBank
Match: gi|1210519656|dbj|GAX21425.1| (hypothetical protein FisN_10Hu003 [Fistulifera solaris]) HSP 1 Score: 167.548 bits (423), Expect = 3.872e-46 Identity = 82/135 (60.74%), Postives = 100/135 (74.07%), Query Frame = 0 Query: 151 IDVAGILQKAGKKALGGGLSGAVASLVQLITLMWLRTTMQYQYRYGLPFAATVQQLYKEGGITRFYQGLPVALFQLPLSRFADVAANAFMIAALDSFESTRGLPLPLKSAFGSIAAGTWRLVLTPLDVVKTTLQV 285 +D + IL KAGKKALGGG +GA AS+VQ+++LMWLRTTM YQYRYG + L+ EGGI RFYQGLP AL Q PL+RF D AAN +IA L+S T+ LPLP+K+A GSI AG WR+ L P+D KT+LQV Sbjct: 45 VDWSAILAKAGKKALGGGTAGASASVVQVLSLMWLRTTMNYQYRYGGSLPNALSTLWSEGGIPRFYQGLPFALVQGPLTRFGDTAANVGIIALLESLPQTKELPLPVKTACGSITAGLWRIFLMPVDASKTSLQV 179
BLAST of EWM28706.1 vs. NCBI_GenBank
Match: gi|929754464|ref|XP_014152214.1| (hypothetical protein SARC_09248 [Sphaeroforma arctica JP610] >gi|906946802|gb|KNC78312.1| hypothetical protein SARC_09248 [Sphaeroforma arctica JP610]) HSP 1 Score: 157.147 bits (396), Expect = 1.530e-42 Identity = 75/130 (57.69%), Postives = 95/130 (73.08%), Query Frame = 0 Query: 156 ILQKAGKKALGGGLSGAVASLVQLITLMWLRTTMQYQYRYGLPFAATVQQLYKEGGITRFYQGLPVALFQLPLSRFADVAANAFMIAALDSFESTRGLPLPLKSAFGSIAAGTWRLVLTPLDVVKTTLQV 285 IL AGK+A+GGG+ GAVA + + +LMWLRTTM YQYRYG + LYKEGGI RFY+G ALFQ PLSRF D AANA ++A LDS+++T LP+ +K+ F S AA TWR+ L P+D +KTT+QV Sbjct: 21 ILTAAGKRAIGGGVPGAVAMGINVTSLMWLRTTMNYQYRYGTSTTEAFKHLYKEGGIRRFYRGYGPALFQGPLSRFGDTAANAGVLALLDSYDTTSNLPVGVKTIFASAAAATWRVFLMPVDTLKTTMQV 150
BLAST of EWM28706.1 vs. NCBI_GenBank
Match: gi|585111150|gb|EWM28727.1| (Mitochondrial carrier domain protein [Nannochloropsis gaditana]) HSP 1 Score: 152.525 bits (384), Expect = 2.075e-39 Identity = 73/130 (56.15%), Postives = 93/130 (71.54%), Query Frame = 0 Query: 156 ILQKAGKKALGGGLSGAVASLVQLITLMWLRTTMQYQYRYGLPFAATVQQLYKEGGITRFYQGLPVALFQLPLSRFADVAANAFMIAALDSFESTRGLPLPLKSAFGSIAAGTWRLVLTPLDVVKTTLQV 285 I + AGK+ALGGG+ GA+A ++Q++TLMWLRT YQYRYG F V LYK+GG+ RFY+GL AL Q PLSRF AAN A L +FE+TRGLPL + +A ++AAG+WR+ L P+D KT LQV Sbjct: 78 IFRIAGKRALGGGIPGALAGMMQVVTLMWLRTVGNYQYRYGTSFTEAVATLYKQGGVGRFYEGLGFALIQGPLSRFGSTAANDGCRALLKNFEATRGLPLFVPTAMAALAAGSWRIFLMPIDTAKTVLQV 207
BLAST of EWM28706.1 vs. NCBI_GenBank
Match: gi|145512157|ref|XP_001441995.1| (hypothetical protein [Paramecium tetraurelia strain d4-2] >gi|124409267|emb|CAK74598.1| unnamed protein product (macronuclear) [Paramecium tetraurelia]) HSP 1 Score: 148.288 bits (373), Expect = 3.195e-39 Identity = 70/129 (54.26%), Postives = 90/129 (69.77%), Query Frame = 0 Query: 157 LQKAGKKALGGGLSGAVASLVQLITLMWLRTTMQYQYRYGLPFAATVQQLYKEGGITRFYQGLPVALFQLPLSRFADVAANAFMIAALDSFESTRGLPLPLKSAFGSIAAGTWRLVLTPLDVVKTTLQV 285 ++ KA GLSG++A +Q+ +LMWLRTTM YQYRYG T++ LY EGGI RFY+GL AL Q PLSRF D AN + +DSFESTR LP+ +++A GS+ AG +R+ LTP+D VKT LQV Sbjct: 19 FKEVASKAFRSGLSGSMAMAIQVCSLMWLRTTMNYQYRYGGTIVGTLKHLYSEGGILRFYKGLAPALLQGPLSRFGDTFANTLFLTLMDSFESTRNLPVMIRAAGGSVMAGVFRIALTPIDTVKTILQV 147
BLAST of EWM28706.1 vs. NCBI_GenBank
Match: gi|551537360|ref|XP_005757308.1| (hypothetical protein EMIHUDRAFT_360139 [Emiliania huxleyi CCMP1516] >gi|485604547|gb|EOD04879.1| hypothetical protein EMIHUDRAFT_360139 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 148.288 bits (373), Expect = 9.381e-39 Identity = 70/130 (53.85%), Postives = 91/130 (70.00%), Query Frame = 0 Query: 156 ILQKAGKKALGGGLSGAVASLVQLITLMWLRTTMQYQYRYGLPFAATVQQLYKEGGITRFYQGLPVALFQLPLSRFADVAANAFMIAALDSFESTRGLPLPLKSAFGSIAAGTWRLVLTPLDVVKTTLQV 285 I+QKA KKA+GGGLSGA+A +VQ++ LMW+RTTM YQYRYG ++ LY EGGI RFYQG+ A+FQ PLSRF D AAN M+ + +P+ +K+ S A WR+++TPLD +KTTLQV Sbjct: 74 IMQKAAKKAIGGGLSGAIAGVVQVLALMWMRTTMNYQYRYGSGTLTAMKALYAEGGIARFYQGVQFAIFQTPLSRFGDTAANTGMMELFAAMAWGANVPIAVKTGCASAAGSLWRILITPLDTLKTTLQV 203
BLAST of EWM28706.1 vs. NCBI_GenBank
Match: gi|219121279|ref|XP_002185866.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|209582715|gb|ACI65336.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 145.976 bits (367), Expect = 2.066e-37 Identity = 81/147 (55.10%), Postives = 105/147 (71.43%), Query Frame = 0 Query: 139 PANAVDASLITEIDVAGILQKAGKKALGGGLSGAVASLVQLITLMWLRTTMQYQYRYGLPFAATVQQLYKEGGITRFYQGLPVALFQLPLSRFADVAANAFMIAALDSFESTRGLPLPLKSAFGSIAAGTWRLVLTPLDVVKTTLQV 285 PAN + A +D GI QKA KKALGGG +GA A++VQ+ +LMWLRT+M YQYRYG +++ L+ EGGI R YQGLP AL Q PL+RF D AAN ++ L++ +T+ LPLPLK+A GS+AAG WR+VL P+D KT +QV Sbjct: 89 PANLISAGATETVDWQGIFQKASKKALGGGKAGAAAAVVQVCSLMWLRTSMNYQYRYGGNLQSSLNTLWAEGGIGRLYQGLPFALVQGPLTRFGDTAANVGILVLLETLPATQDLPLPLKTACGSVAAGLWRIVLMPVDASKTVMQV 235
BLAST of EWM28706.1 vs. NCBI_GenBank
Match: gi|760439217|ref|XP_011396677.1| (hypothetical protein F751_6767 [Auxenochlorella protothecoides] >gi|675351359|gb|KFM23799.1| hypothetical protein F751_6767 [Auxenochlorella protothecoides]) HSP 1 Score: 144.05 bits (362), Expect = 3.015e-37 Identity = 77/149 (51.68%), Postives = 106/149 (71.14%), Query Frame = 0 Query: 137 LPPANAVDASLITEIDVAGILQKAGKKALGGGLSGAVASLVQLITLMWLRTTMQYQYRYGLPFAATVQQLYKEGGITRFYQGLPVALFQLPLSRFADVAANAFMIAALDSFESTRGLPLPLKSAFGSIAAGTWRLVLTPLDVVKTTLQV 285 L PA A S T + + +L+ AGKKALGGG+ GA A +Q+++LMWLRTT+ YQYRYG+ A ++ LYKEGG+ RFY+G+ AL Q P+SRF D AANA ++ L+ ST+ LP+P+K+A S AAG +R+ L P+D +KTT+QV Sbjct: 39 LVPAVAYQPSEATPL--SQVLRNAGKKALGGGIPGAAAMGIQVVSLMWLRTTVNYQYRYGMTTTAAMKTLYKEGGVLRFYRGVGPALIQGPMSRFGDTAANAGVLTLLNESASTKDLPIPIKTAAASAAAGGFRIFLMPVDALKTTMQV 185
BLAST of EWM28706.1 vs. NCBI_GenBank
Match: gi|302846029|ref|XP_002954552.1| (hypothetical protein VOLCADRAFT_82831 [Volvox carteri f. nagariensis] >gi|300260224|gb|EFJ44445.1| hypothetical protein VOLCADRAFT_82831 [Volvox carteri f. nagariensis]) HSP 1 Score: 145.976 bits (367), Expect = 3.255e-37 Identity = 70/129 (54.26%), Postives = 93/129 (72.09%), Query Frame = 0 Query: 156 ILQKAGKKALGGGLSGAVASLVQLITLMWLRTTMQYQYRYGLPFAATVQQLYKEGGITRFYQGLPVALFQLPLSRFADVAANAFMIAALDSFESTRGLPLPLKSAFGSIAAGTWRLVLTPLDVVKTTLQ 284 +L AG+K+LGGG+ G VA Q+++LMW+RTT+ YQYRYG + LYKEGGI RFY+GL AL Q PLSRF D AANA +A LDS+ES++GLP+ +K+ S AAG +R++L P+D KT +Q Sbjct: 79 VLSDAGRKSLGGGIPGMVAMATQVLSLMWMRTTINYQYRYGTDTMTAFRTLYKEGGIPRFYRGLGPALIQGPLSRFGDTAANAGTLALLDSYESSKGLPVGVKTLVASSAAGAFRILLMPVDTCKTIMQ 207 The following BLAST results are available for this feature:
BLAST of EWM28706.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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