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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100002g82.4817.mrna |
| Orig protein id | gnl|cribi|Naga_100002g82.4817 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002458.1 | supercontig | CM002458.1:518182..519124 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna1937 ID=rna1937|Name=rna1937|organism=Nannochloropsis gaditana|type=mRNA|length=852bp
ATGTCGGCAGATGTGCCTGACGTGAGTTGCAGCAAGAGCTGTCCTTCCCG
TAGGACCTTGCACGAATACCCAATGTTGATGGCAGTCTCCATCTTATCGC
CAGTTAGGACACAGAACTTGACGCCCCCTGTGGCTAGGTCCGCAATGGTG
TCAGGTACTCCGTCCTGCAGCTTGTCTTCTATAGCCGTGAGACCAACAAT
TGTCAGGTCTTTCTCTAGATTGTCTGCGACTTTGCTCATCAGCCTAGGAC
TAATGTTCGAAGACCTTCCTGTGCAAAGATTTTCAGGTGATCGACCATCG
TTGTCGCCGCCTCTACACTCCCGCAGGCGTCCAACTTTGAATCTTGCCAT
TAATTTTAAGCGTTATTTGCTGAGTAGTACGACCAATCAGCTCATAGGCA
GCCTCTTGTGCGAACTCCACCAACGCTTTCTCATCCGGACTTTCGGCCTG
GTAGGTCAAGGCATCCTTGTCATAAGAATTAGCGCGAGGATTTTGAGAAA
ATCATCAGCTGGTGAGCCTGGCGCCGCATCTCTATTAAGGCCCTCAACGC
GCCCCATAAACTTTGCCTTGGACAGATGCACGCTTAAAGCGCATCACATT
TTGTGTAAGTGTTCCAGTTTTGTCGCTGAAGACGTACTGGATTTGACCCA
AGTCTGTTACAATATTGCTGCGTGCCTTTGCAGGAGTATCGCTCTCTTCA
TGGTGCATGCTCAGATCCTCGTTGATGAAGTACAGATGGGCATATCGAAT
TTTTACAAAAACGGCTTCTATACAGACGCTATCAACAAATCTAGTTCCTC
ACGAAGGTCCAACAATGGTATTTGTGTCTTGACTACGTACCGAAATTGTT
GA back to topprotein sequence of rna1937 >rna1937-protein ID=rna1937-protein|Name=rna1937|organism=Nannochloropsis gaditana|type=polypeptide|length=225bp
MGRPKKKLYADRTKSSKMEVPLKPDLNRKKNKHMTRTIFFFKIGHSIKRC
KIIRAFPGLTLLAFITADAYAHICFLDHVDIVCPVTDGKSDGRGGDFLFD
QTDQLCLLLWRDTTSDNSRRCFHNLKEDDLEAWVTEDIHQGGTLHNKSEI
GDVRVCPRQPSVGVSRRLLKYIIWLWPLHSLGFAHHCLSRRLGEANMNRV
GLDSVGKCLSITSHADATSWARRVA back to topmRNA from alignment at CM002458.1:518182..519124- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna1937 ID=rna1937|Name=rna1937|organism=Nannochloropsis gaditana|type=mRNA|length=943bp|location=Sequence derived from alignment at CM002458.1:518182..519124- (Nannochloropsis gaditana)
ATGGGCAGGCCCAAGAAGAAGTTGTATGCCGATAGGACGAAATCTTCAAA
GATGGAAGTCCCACTAAAGCCAGACTTGAATAGGAAAAAAAACAAGCACA
TGACGAGGACTATATTTTTGTAGAAGGAGTAAAGGACGACCTTGGAGAGC
CGCCGGTAGGACCAGCGGCCATGAACTAAGAGGAGTCGCTTAAGGAAGCG
AAATTGAGCGATACTGAAATCCGAGGCGTTGACGGCTATATTAGGATTTA
CATGAAAGATTTTATGAGACAAAGTATTTTCAACACTCTCAAGCAGCTTT
AAAATTGGTCACAGTATAAAACGATGTAAGATTATTCGAGCCTTTCCGGG
ACTTACCCTGCTGGCCTTCATTACCGCTGATGCCTATGCCCACATCTGCT
TCCTGGATCATGTTGACATCGTTTGCCCCGTCACCGATGGCAAGAGTGAC
GGGCGTGGGGGAGACTTCCTCTTTGACCAGACGGACCAATTGTGCCTTCT
GCTTTGGAGAGACACGACAAGCGATAACAGCAGAAGATGCTTTCATAATC
TCAAAGAGGATGACCTTGAGGCCTGGGTGACTGAAGACATACACCAAGGC
GGGACCCTCCATAACAAAAGCGAAATCGGTGACGTACGAGTATGCCCGCG
ACAGCCGTCGGTGGGTGTGTCGCGTCGCCTGTTGAAGTATATCATCTGGC
TGTGGCCCTTGCACAGCTTGGGTTTTGCTCACCATTGCCTTTCTCGCCGC
CTTGGTGAAGCGAACATGAATAGGGTGATGTACAGGCGGAAGCGGCGCGT
CTGGCGATGAAATGTGCGGTGAGTGTGAGGGAATTTTCTGACACTGGGAT
TTCATTCCTAAGGTAGGACTTGACAGCGTGGGAAAGTGTTTAAGCATCAC
ATCCCATGCCGATGCCACATCTTGGGCTCGACGTGTGGCCTGA back to topCoding sequence (CDS) from alignment at CM002458.1:518182..519124- >rna1937 ID=rna1937|Name=rna1937|organism=Nannochloropsis gaditana|type=CDS|length=2034bp|location=Sequence derived from alignment at CM002458.1:518182..519124- (Nannochloropsis gaditana)
GTAGGACTTGACAGCGTGGGAAAGTGTTTAAGCATCACATCCCATGCCGA
TGCCACATCTTGGGCTCGACGTGTGGCCTGACTTTAAAATTGGTCACAGT
ATAAAACGATGTAAGATTATTCGAGCCTTTCCGGGACTTACCCTGCTGGC
CTTCATTACCGCTGATGCCTATGCCCACATCTGCTTCCTGGATCATGTTG
ACATCGTTTGCCCCGTCACCGATGGCAAGAGTGACGGGCGTGGGGGAGAC
TTCCTCTTTGACCAGACGGACCAATTGTGCCTTCTGCTTTGGAGAGACAC
GACAAGCGATAACAGCAGAAGATGCTTTCATAATCTCAAAGAGGATGACC
TTGAGGCCTGGGTGACTGAAGACATACACCAAGGCGGGACCCTCCATAAC
AAAAGCGAAATCGGTGACGTACGAGTATGCCCGCGACAGCCGTCGGTGGG
TGTGTCGCGTCGCCTGTTGAAGTATATCATCTGGCTGTGGCCCTTGCACA
GCTTGGGTTTTGCTCACCATTGCCTTTCTCGCCGCCTTGGTGAAGCGAAC
ATGAATAGGATGGGCAGGCCCAAGAAGAAGTTGTATGCCGATAGGACGAA
ATCTTCAAAGATGGAAGTCCCACTAAAGCCAGACTTGAATAGGAAAAAAA
ACAAGCACATGACGAGGACTATATTTTTGTAGGACTTGACAGCGTGGGAA
AGTGTTTAAGCATCACATCCCATGCCGATGCCACATCTTGGGCTCGACGT
GTGGCCTGACTTTAAAATTGGTCACAGTATAAAACGATGTAAGATTATTC
GAGCCTTTCCGGGACTTACCCTGCTGGCCTTCATTACCGCTGATGCCTAT
GCCCACATCTGCTTCCTGGATCATGTTGACATCGTTTGCCCCGTCACCGA
TGGCAAGAGTGACGGGCGTGGGGGAGACTTCCTCTTTGACCAGACGGACC
AATTGTGCCTTCTGCTTTGGAGAGACACGACAAGCGATAACAGCAGAAGA
TGCTTTCATAATCTCAAAGAGGATGACCTTGAGGCCTGGGTGACTGAAGA
CATACACCAAGGCGGGACCCTCCATAACAAAAGCGAAATCGGTGACGTAC
GAGTATGCCCGCGACAGCCGTCGGTGGGTGTGTCGCGTCGCCTGTTGAAG
TATATCATCTGGCTGTGGCCCTTGCACAGCTTGGGTTTTGCTCACCATTG
CCTTTCTCGCCGCCTTGGTGAAGCGAACATGAATAGGATGGGCAGGCCCA
AGAAGAAGTTGTATGCCGATAGGACGAAATCTTCAAAGATGGAAGTCCCA
CTAAAGCCAGACTTGAATAGGAAAAAAAACAAGCACATGACGAGGACTAT
ATTTTTGTAGGACTTGACAGCGTGGGAAAGTGTTTAAGCATCACATCCCA
TGCCGATGCCACATCTTGGGCTCGACGTGTGGCCTGACTTTAAAATTGGT
CACAGTATAAAACGATGTAAGATTATTCGAGCCTTTCCGGGACTTACCCT
GCTGGCCTTCATTACCGCTGATGCCTATGCCCACATCTGCTTCCTGGATC
ATGTTGACATCGTTTGCCCCGTCACCGATGGCAAGAGTGACGGGCGTGGG
GGAGACTTCCTCTTTGACCAGACGGACCAATTGTGCCTTCTGCTTTGGAG
AGACACGACAAGCGATAACAGCAGAAGATGCTTTCATAATCTCAAAGAGG
ATGACCTTGAGGCCTGGGTGACTGAAGACATACACCAAGGCGGGACCCTC
CATAACAAAAGCGAAATCGGTGACGTACGAGTATGCCCGCGACAGCCGTC
GGTGGGTGTGTCGCGTCGCCTGTTGAAGTATATCATCTGGCTGTGGCCCT
TGCACAGCTTGGGTTTTGCTCACCATTGCCTTTCTCGCCGCCTTGGTGAA
GCGAACATGAATAGGATGGGCAGGCCCAAGAAGAAGTTGTATGCCGATAG
GACGAAATCTTCAAAGATGGAAGTCCCACTAAAGCCAGACTTGAATAGGA
AAAAAAACAAGCACATGACGAGGACTATATTTTT back to top
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