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Properties
Property Name | Value |
Product | hypothetical protein |
Orig transcript id | gnl|cribi|Naga_100002g95.4806.mrna |
Orig protein id | gnl|cribi|Naga_100002g95.4806 |
Gbkey | mRNA |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
CM002458.1 | supercontig | CM002458.1:478568..479268 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna1924 ID=rna1924|Name=rna1924|organism=Nannochloropsis gaditana|type=mRNA|length=1482bp ATGTTTGACGTAGTATTTCTGTACTTTACTTACCAAGCAAACCTTAATCT TCACGAACAACTCACACAGATAGTTTTATTCGGGCTTCTTGCTTGCGCGG CATCTTGTACACGAAGCCAGATTCCTGCTTGCTTTCCAACCAGACACAAC TACAAGCTACCCCGTTGCACAGGACTAGCAGGGGGCTTTATAATGTTCTG CTCTACATCCGTCAGCCAGCTGGTGGTAGTTTCGGTCACGCTACTTTTTG GTTCAACAAATGCGTTCGTCAGCCCGGCAATCTGGTCCCGTATTCAAAGC AGCCTTCGCCTGCACGGTCAACGTGTCGAAGCAGAACAGCCACCTGTTCT CGGAAGTGTTGCGAGCACTAGCCCCTTCCGGCGCGCTTTAACGTTCGGAG AACGTATGACAGCACTGCGAGCCACAGCACCAATGAGCTTTGGTGACTTT GGTGGACAACAAAATGGAGATGAGCTGAGTTTCGCTGAGGTGCGTGAGCA GCTTGGGGCCCTCGAGTCGCGTTTGGCGGGCGCCATGGAATTCGGGAGAT ACGATGAGGCGAAGCAGCTCGTCAACGAGATCACTACTATGAAAGATTTT TTGGAAAAACAATTAAATGGACGCCAGGTTGGGAGTGATGGTGTACCAAA CGGGAAAGGCAGCTCTCGAGCCTCTCGCAACCCGTTCTTCGACGCCTTCG GCTTGGGCGGGGCCTCTCCGATGGCGGCGACCATGATGGCTCCCGTACAG CCTTCCTCAAGCGCCCCACAACCTCGGCGCAGCAGTCGACCGGGCCTTGG CGCCTTCGGAAGCGTCGTGGGCTCCCGCCGACGGCCCTCGGGCTCGGCCT CAAAGAGCTCAGGCGGGCTGGTGAATGGTCCCCGGGAGGGCTGGGTGGGG AAAGGCAAGTCAGGCGATCTTCCCATGGAAGCCGTCAGAAAGCGTCACTC CGACATCACGGCCTATGGCATTCGCGTGGAGGTATTTTGCTTCTTCCAGC CAGGTGCCTCGCGTCCTCAGGACAACCTCTACCAGTTCCAGTGCAACGTC CGCCTCACCAACACGAACCCGGGGGACGTCCAGCTCCTCTCCCGCGAGCT CAAGATCTTCAAGGCAGACGGCTCCCCCCCTGAGTACGGCCCAGCCTCGC AGCAGCTGGAGTCTCAGCCGGTAGTGGGGCCGGGCTCTGTGTACATGTAC ATGTCCGAGTTCGGAATCACCTGCGTGCCGGAAGACAGGAAGTACCTGGG CCGAATCGAGGGTCACTTCAACGTGGCCGTGAAGGATGAAAATGCCGTGG TGAAGGTTCCCATCGCACCATTTTGGCTGGAGCTGCCGGGCGACACCTTG GCGGGAGAGCTGGAAAAGCGCGGTTTCAGGATTTGGTATACACACCTTGA GTTGGGATCGAGTGCACACGCAGGGATAAAAAAGGGGATACGAGCGTTGG AAAAAGGGATCATGAAGGGCTCAACTACGTAA back to topprotein sequence of rna1924 >rna1924-protein ID=rna1924-protein|Name=rna1924|organism=Nannochloropsis gaditana|type=polypeptide|length=159bp MRRTDHGVKGRHACRSQAMKGVSQIRGGAWTTVSLGIEPSEWVRERPSRS LFLIIGSPDNPPSAEALFVCKLERGRRKSKVWQSCRLSSSQESARMCCCI FSLYYSVRANTFTRLFVVREGYGVRAYILSSHKDRGKRTNDSRRCCGLLR SAHVQLSLQ back to topmRNA from alignment at CM002458.1:478568..479268+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna1924 ID=rna1924|Name=rna1924|organism=Nannochloropsis gaditana|type=mRNA|length=701bp|location=Sequence derived from alignment at CM002458.1:478568..479268+ (Nannochloropsis gaditana) atgaggaggacggaccACGGGGTAAAGGGAAGACACGCTTGTAGATCGCA
AGCGATGAAAGGAGTGAGCCAAATCAGGGGGGGCGCGTGGACGACGGTCC
TCAGTGACGCGCTTGGACGGTAGTCTTGGTCGAGGATCGTTTCAGGTCAG
TTTAGGAATCGAGCCATCAGAATGGGTACGTGAAAGGCCTTCTCGAAGTC
TCTTCTTAATAATTGGATCGCCTGATAACCCGCCTTCCGCGGAGGCGCTG
TTTGTATGTAAGCTAGAGAGAGGCCGACGGAAGTCGAAGGTGTGGCAATC
GTGTCGTTTGTCCTCCAGCCAGGAAAGCGCGAGGATGTAGTTTTAGTGGG
ATGGTTGGCTATTTGTTGAGTGGAAACTCAGGTGCTGTTGCATTTTTTCC
TTATACTATTCTGTGCGGGCCAATACTTTCACGAGGCTCTTCGTCGTGAG
AGAAGGTTATGGTGTAAGGGCCTATATACTCAGTTCACATAAAGATCGCG
GTAAAAGAACAAACGACTCTAGAAGATGCTGTCGATTTTGCAGATTTTTC
ATGGATAAGCTCGTGTGGCTCAGGATTTTCCAAGGCTTCTTGGCAATCTT
TACTTCAGGCAAGTCTCGTCCTGCGAAGCACATCTTTCGGTGCCCAACTC
AAAGCAGGTGGCTTGCTTCGATCGGCTCATGTTCAGCTCTCCTTGCAATG
A back to topCoding sequence (CDS) from alignment at CM002458.1:478568..479268+ >rna1924 ID=rna1924|Name=rna1924|organism=Nannochloropsis gaditana|type=CDS|length=1920bp|location=Sequence derived from alignment at CM002458.1:478568..479268+ (Nannochloropsis gaditana) atgaggaggacggaccACGGGGTAAAGGGAAGACACGCTTGTAGATCGCA AGCGATGAAAGGAGTGAGCCAAATCAGGGGGGGCGCGTGGACGACGGTCA GTTTAGGAATCGAGCCATCAGAATGGGTACGTGAAAGGCCTTCTCGAAGT CTCTTCTTAATAATTGGATCGCCTGATAACCCGCCTTCCGCGGAGGCGCT GTTTGTATGTAAGCTAGAGAGAGGCCGACGGAAGTCGAAGGTGTGGCAAT CGTGTCGTTTGTCCTCCAGCCAGGAAAGCGCGAGGATGTGCTGTTGCATT TTTTCCTTATACTATTCTGTGCGGGCCAATACTTTCACGAGGCTCTTCGT CGTGAGAGAAGGTTATGGTGTAAGGGCCTATATACTCAGTTCACATAAAG ATCGCGGTAAAAGAACAAACGACTCTAGAAGATGCTGTGGCTTGCTTCGA TCGGCTCATGTTCAGCTCTCCTTGCAATGAatgaggaggacggaccACGG GGTAAAGGGAAGACACGCTTGTAGATCGCAAGCGATGAAAGGAGTGAGCC AAATCAGGGGGGGCGCGTGGACGACGGTCAGTTTAGGAATCGAGCCATCA GAATGGGTACGTGAAAGGCCTTCTCGAAGTCTCTTCTTAATAATTGGATC GCCTGATAACCCGCCTTCCGCGGAGGCGCTGTTTGTATGTAAGCTAGAGA GAGGCCGACGGAAGTCGAAGGTGTGGCAATCGTGTCGTTTGTCCTCCAGC CAGGAAAGCGCGAGGATGTGCTGTTGCATTTTTTCCTTATACTATTCTGT GCGGGCCAATACTTTCACGAGGCTCTTCGTCGTGAGAGAAGGTTATGGTG TAAGGGCCTATATACTCAGTTCACATAAAGATCGCGGTAAAAGAACAAAC GACTCTAGAAGATGCTGTGGCTTGCTTCGATCGGCTCATGTTCAGCTCTC CTTGCAATGAatgaggaggacggaccACGGGGTAAAGGGAAGACACGCTT GTAGATCGCAAGCGATGAAAGGAGTGAGCCAAATCAGGGGGGGCGCGTGG ACGACGGTCAGTTTAGGAATCGAGCCATCAGAATGGGTACGTGAAAGGCC TTCTCGAAGTCTCTTCTTAATAATTGGATCGCCTGATAACCCGCCTTCCG CGGAGGCGCTGTTTGTATGTAAGCTAGAGAGAGGCCGACGGAAGTCGAAG GTGTGGCAATCGTGTCGTTTGTCCTCCAGCCAGGAAAGCGCGAGGATGTG CTGTTGCATTTTTTCCTTATACTATTCTGTGCGGGCCAATACTTTCACGA GGCTCTTCGTCGTGAGAGAAGGTTATGGTGTAAGGGCCTATATACTCAGT TCACATAAAGATCGCGGTAAAAGAACAAACGACTCTAGAAGATGCTGTGG CTTGCTTCGATCGGCTCATGTTCAGCTCTCCTTGCAATGAatgaggagga cggaccACGGGGTAAAGGGAAGACACGCTTGTAGATCGCAAGCGATGAAA GGAGTGAGCCAAATCAGGGGGGGCGCGTGGACGACGGTCAGTTTAGGAAT CGAGCCATCAGAATGGGTACGTGAAAGGCCTTCTCGAAGTCTCTTCTTAA TAATTGGATCGCCTGATAACCCGCCTTCCGCGGAGGCGCTGTTTGTATGT AAGCTAGAGAGAGGCCGACGGAAGTCGAAGGTGTGGCAATCGTGTCGTTT GTCCTCCAGCCAGGAAAGCGCGAGGATGTGCTGTTGCATTTTTTCCTTAT ACTATTCTGTGCGGGCCAATACTTTCACGAGGCTCTTCGTCGTGAGAGAA GGTTATGGTGTAAGGGCCTATATACTCAGTTCACATAAAGATCGCGGTAA AAGAACAAACGACTCTAGAAGATGCTGTGGCTTGCTTCGATCGGCTCATG TTCAGCTCTCCTTGCAATGA back to top
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