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Properties
| Property Name | Value |
|---|
| Product | serine carboxypeptidase ii-2 |
| Orig transcript id | gnl|cribi|Naga_100002g126.4824.mrna |
| Orig protein id | gnl|cribi|Naga_100002g126.4824 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002458.1 | supercontig | CM002458.1:415722..418375 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna1895 ID=rna1895|Name=rna1895|organism=Nannochloropsis gaditana|type=mRNA|length=2532bp
TTGTCAACACTTCGGGCTTGCCAAGTGCCAAGACAAGTCGCCGAGGGGAA
CACGCCTTTTAAGTGTTGCCGTCACGAGTCAGAGGCTCGAGAAGAGGGCG
TGACCCGCCGTAAGTGCAAAACCGATTATATGTCCTTAGACACCCAAACA
CCACCACGCCCTATGAAAAATCATGCACACACATCACACTCACCCCGACC
TGCACCAAATTGCCGCCGGTGGAAGCACGCCGAGTGAACGAGTCAGCAGG
CGAGACGTGCCTTGTGTGCGCCACTTTTGGGCCTTTTTTTGTTCTGGAGT
GGAGCCGAGTGGAGGGCGTGAAGCACGGCAAGGGAGGGAGCATGCCGGGC
CGCCACGGACTGCTTTACGATCGAGAAGCAGAGGTCAAGCAGGGTCTCGG
CACCTGCGCGTGTTACAGGCGTGTGATATGTACGTGTTTGGTCGGTTGTT
GGCCTCGTCCTAAGAAATTTGTCAGTGAGGGGCGTCTTGGTTACCGCTCC
GACAGTCTAGAAGCCGAATTATGTTCCTTGACCTGGCTTCACCGCGCCTG
TCAGGGGCAAATTACGCGGGGCATGAGGTACCTCTTAGCGTAAAAAGAGG
CGGACATGTTTGAAATTGCGAAATTAAGGCCTCCCAGGGTAGACTCAGTC
AAAGTGGATTCTGTACCATCTTCTCACCTTACTGCTTGTCGTCTTCCATC
GCTGTATCTCCCCTACGTTTCTACTGTTTTTTACGCTTCTCACAGGACCA
ATGAGTGCCAAGGGGACCACAGCATCTGCCTTAGGACCGGATGCTTGGAA
AGATTTGCTTAACTGGTATGTTTATGTGATTGGTGGTTCAATCCAGAATG
CTAAACTGGCCATTTAGGGGGGGGCATTCAAGAGCTTACCCCCCATTCAC
GGGCTTGTACCGTGAGGTAGCTCTTTCCAGCTGAATTGGCACCGATGTGG
TAACCTTTATCATGAGATATATTCGTCTGTCTTGAGAATCCAAGCTGGGT
GGAACGCTTGGGTCCTTGTACCCTGCGGCGCGGCATACTCCTTGAGCTCA
AGAGACTAGAACGTTGAGAAGCGCCAGTCCACGGGCACGATTTGGCGCCT
TTGAAGCATGCAGGACGGCCAAGGGGCTTGGCTGGAAATAATAGACTGTT
GTACTGGCCGTTTTTGATGGTCATCGGCCAGCGCCTCGAGGTCTTCTCAC
GTCGTGTCGCGCCCCCCCTCACAGGACACTGAAGCAGCAAGGCCCCACTG
CTGAGAGCGCCGGCGGGGCGGCTCCAGGGCCCATATCGCATGACAAGAAA
GAATGGCTAGAGCGGGTCATGGAAGGGACGTTCGTGGACATGAGCAAGCG
GCTGCGAGAGCGTTTGGGCTTGCTGGAGGAGCTTCTGCAGGGGGAGAGGA
GTGAGCCGCGCCCTAGACCAGAGGCAAACGTGCCGGCCGCCTCGGACCAA
GAGCCGAGCGCGGTGGAGCGAGGACAAGCGCTCTGGGAGGAAATGGAGGA
AGACGTGGAAAATCTGGATTACGCGCTCATGTTTTGCCAGGTGGGGGGCC
TTCAAGTGCTCTTCCAGTACCTGCTGCGGGCGGCGGCGGGGGAGCAGGAC
GCCGAGGCCCGGACATGGGCCGTGCGCGTGCTGACGGTCTTGGCGACGCT
GACCCAGAACAATCCCCCCGTGCAGGCGGAGGTGCTGGCCTTCGCGATGC
AGGACGCCCGGGGGGGGGGCAAGACGTGCTGGCGCTCCTGTCTCGTCTCT
TTCTCCGCGAGGTCGGCCTGGAACAGGCGAGCTCTGTGTCCGAGGGGTCT
GGGGAGAGGCATGGGCGTCTCCAGGCGAAGCTTCTGCACGCCTTATCCTG
CACTGTCCGGGGCCACGCCGATGCCGAAGCCCGTTTTGTGCAGTCCTACG
CCCCGGAGGTCTTCCGAGCCGGCCTCCAGCCCTCCCGACAGGAGCGCGTT
CAGGTCAAGGCGCTCTTCTTCCTGCAAGCCCTTCTCGGCGCCGACGACGC
CACGCCTGCACGAGGAGAGGCCTTGCTGCCCCTGCTCCCCTTGGTGGTTC
CGTGCTTGGAAAACAACGAGAACGTGGACCTGAGACACACGGCCGCCTGT
GTGGTGACGGGGTTGGCGAACCTGACAGGGGGGCCCGCGGTGATTTTCGG
CAAAGATGGGGGGGAAGCATTGCGGAGGGCGATGGAGAGACGTCAAGGAT
TGCTTGGATCGGGGTCGGACGAGGCGATGGGAGAGGAGTTGCTGTTTTGG
AGCGCTTTGGCGAGAGGGGGCACTGGAAGAATGTCGTGGAGGGACGGGGA
GGGAATAGGTGAGGAAGGTGAGGGAGTGGAGGGGGCGGGAGGAGGAGGAG
GGCGTGTTCTGCAATCTCTGCAATCAGGAGCATCGGAAAGCGCGACGGCC
GACCAGACAAATGAGGCGCCGGCGCCTGTTTTGCTCCTGGGCCAACCGCA
ATACCTGAGCGGAGCGAGCAGTGCGCCGTAGGCAGGAAGCAAATAAAAAA
TACGTGCTGCTTTAAAATTTGAACCTGTGCAA back to topprotein sequence of rna1895 >rna1895-protein ID=rna1895-protein|Name=rna1895|organism=Nannochloropsis gaditana|type=polypeptide|length=700bp
MHIADSREMGWRLPGRRRCCWGTQRKDSSMILLGLRFLLFCSAWGNTHLR
TAGPLDKDLQAALPPATDLLSMPTGLTKGEKCAKAIEKVLLPIGMNATSV
PPRPDEDESLPRASPLPIETIYTKEALQDEIISPLPGYKDDTDFRQFSGY
LPITSSKNIFYWYVEAVDTPESAPLVFWTNGGPGCSGLFGFLAEHGPFRP
LEDGQTLVRNPYSWNRVANMLYVEQPVTVGFSYSSEQVDKAAFGDDQSAL
DNFRVIQSFLSRYPHLRSHELYLSGESYGGHYLPSLARFILDKNAAPDPT
SPPLNLQGFLVGNPSTDPVFQLLGQVETLEARGLLPPALSRRWADECAAT
PTVVHLGSMSCMQLQREILEAVEALDLYSISTAPCRLVLDAEGLALGERV
RNATAAVASAGASQAVKEFVRGPQARREGKGTVGSCLGDPKLWTELVRAK
GALSAAAGAGEREPAGGGPVDEAAPAGPADEKVSLRAAPSPARERGSGAP
QDRRLRPLSPSLSAKNAEEPAVGPGLPTAAPLAYDSCQAVYGARYLNRAD
VKAALHASEDVAWEDCSFLVLANFRRSDWSTLLEPTFKSLVGGEKGEGER
TGLRVLLYSGDDDTVCSSRGTELWLESLAWGAERAWAPWFVRGAAAGGRE
GGREALPAGMMTKYKNGLVFATLEGAGHAVPSFKPREAFFLFSEYLYDRL back to topmRNA from alignment at CM002458.1:415722..418375- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna1895 ID=rna1895|Name=rna1895|organism=Nannochloropsis gaditana|type=mRNA|length=2654bp|location=Sequence derived from alignment at CM002458.1:415722..418375- (Nannochloropsis gaditana)
TGTGATGGAAAATGCCCTCAACTTTGAAAACCTCGGATGGCTTCTTGTTC
CTACATCCAATTTAAAAGAAGCATCTACGACGACCTAACATGCCATGCAC
ATTGCAGATAGCCGGGAGATGGGATGGCGACTCCCTGGGCGCAGGAGGTG
CTGCTGGGGAACGCAAAGAAAAGACTCCAGCATGATTCTGTTGGGATTGC
GCTTTCTACTATTTTGTTCCGCCTGGGGAAACACCCATTTGCGCACAGGT
AGGTTCCTGCGGTATGAGATGGATGGTTTTGATGCAGCAATGAAGGCACA
ATTTTGTTTGGCTGGTCGATCACAACATATTCTTGAGTTTCGCATACTTT
CATTACTACGTGTACCTTATCACAGCTGGACCCCTCGACAAAGATCTTCA
AGCGGCGCTTCCCCCTGCAACTGATTTGCTTTCGATGCCGACGGGTTTGA
CGAAAGGCGAAAAATGTGCCAAGGCGATTGAGAAAGTTTTGCTCCCAATA
GGCATGAATGCTACTTCAGTCCCCCCTCGCCCTGATGAGGACGAGTCCCT
TCCACGAGCATCTCCTCTTCCGATTGAAACAATTTATACCAAAGAAGCCC
TGCAGGACGAAATTATTTCACCATTGCCGGGATATAAAGATGACACAGAC
TTTCGACAGTTTTCCGGCTACCTCCCGATCACAAGCAGCAAGAACATTTT
TTATTGGTACGTGGAGGCCGTCGACACCCCCGAGAGCGCCCCGCTGGTAT
TCTGGACGAACGGAGGGCCCGGATGCAGCGGTCTGTTCGGCTTCCTGGCC
GAGCACGGTCCGTTTAGGCCGTTAGAGGACGGGCAGACGCTGGTGCGTAA
CCCTTACAGCTGGAACCGTGTGGCCAACATGCTGTACGTGGAGCAACCCG
TGACGGTGGGCTTCAGCTACTCGAGCGAGCAGGTGGACAAGGCGGCCTTT
GGGGACGACCAGTCGGCCCTGGACAACTTCCGCGTCATACAAAGCTTCCT
GAGCCGTTACCCGCACCTTCGCTCGCATGAGTTGTACCTGTCAGGGGAGT
CGTACGGGGGCCACTACCTTCCCTCGCTCGCCCGCTTTATCCTCGACAAG
AACGCCGCGCCAGATCCAACCTCCCCCCCCCTCAACCTCCAGGGCTTCTT
GGTCGGGAACCCCTCCACGGACCCCGTCTTCCAGCTGCTCGGCCAGGTGG
AGACCCTGGAGGCGCGCGGCCTCCTCCCCCCGGCCCTGTCCCGCCGATGG
GCCGACGAATGCGCCGCCACTCCCACGGTCGTGCACCTGGGGTCCATGTC
CTGCATGCAGCTCCAGCGAGAGATCCTAGAGGCAGTGGAGGCCTTGGATT
TGTACAGCATCTCTACCGCACCCTGCCGCCTGGTCTTGGACGCGGAGGGC
CTGGCGCTCGGGGAGAGGGTCAGGAATGCGACGGCCGCAGTGGCCTCCGC
TGGGGCAAGTCAAGCCGTCAAGGAATTTGTGCGAGGGCCCCAGGCTCGGA
GAGAGGGTAAAGGTACTGTGGGCTCCTGCCTGGGTGATCCAAAGCTGTGG
ACGGAGCTCGTCAGGGCCAAGGGAGCCCTTTCTGCCGCCGCGGGGGCGGG
GGAGCGAGAGCCTGCCGGTGGGGGCCCGGTCGACGAGGCAGCCCCAGCGG
GTCCTGCGGACGAGAAGGTCTCCCTGCGGGCCGCGCCGAGCCCCGCCCGT
GAGCGAGGCTCGGGCGCGCCCCAGGATCGCCGTCTCCGGCCCCTCTCCCC
CTCACTTTCCGCGAAGAATGCCGAAGAGCCGGCCGTGGGCCCCGGTCTCC
CCACCGCCGCCCCCCTGGCTTACGACAGCTGTCAAGCCGTGTATGGCGCC
CGGTATTTGAACAGAGCGGATGTGAAGGCAGCGCTCCATGCCTCAGAGGA
CGTGGCCTGGGAGGACTGCTCTTTCCTGGTACTCGCCAATTTTCGGCGAA
GCGACTGGTCCACATTGCTTGAGCCGACGTTCAAGAGCCTTGTTGGGGGC
GAGAAGGGCGAAGGGGAGAGGACGGGGCTGCGGGTGTTGCTGTACTCAGG
AGACGACGACACGGTGTGCAGCAGTAGGGGCACGGAGCTCTGGCTAGAGT
CCTTGGCGTGGGGAGCGGAGAGAGCGTGGGCTCCTTGGTTTGTAAGAGGG
GCGGCAGCGGGCGGGAGAGAAGGGGGCAGGGAAGCCCTCCCTGCGGGCAT
GATGACCAAGTACAAGAACGGCCTGGTCTTCGCCACACTGGAGGGGGCGG
GCCACGCCGTGCCCAGCTTTAAGCCCCGCGAGGCCTTTTTCCTCTTTTCG
GAGTACTTGTACGACCGCCTTTAAGAAAGGAGAGCGTTGTTGTTGAGGCC
TTGAAAGGACGGGATGTGGCTTCGAAGGAGAGGGGAGGGCCAGGGAATGG
GAGCAAAGGTCCTGAGAATTCTGCATTGGTGGTGCTTTGTGAAGGGAAAA
GCATGCGAGAAGGGTCGATGACGCTGGGAAAGTGGTGAATGGAGGGAATG
ACGTCACGTTAAATTGGATCATGGGGGTATGAGTGGAAGGGGGGTGTACA
CATGCAGGCAGAGATATGTGCAAAGTATGCAGATTAAGTACAGGGCCCGT
GGTCGCGTCTCGTCGAGTAATAAGGAAAATACTAAGGCCGACGCGAGCGT
TGCA back to topCoding sequence (CDS) from alignment at CM002458.1:415722..418375- >rna1895 ID=rna1895|Name=rna1895|organism=Nannochloropsis gaditana|type=CDS|length=4206bp|location=Sequence derived from alignment at CM002458.1:415722..418375- (Nannochloropsis gaditana)
CTGGACCCCTCGACAAAGATCTTCAAGCGGCGCTTCCCCCTGCAACTGAT
TTGCTTTCGATGCCGACGGGTTTGACGAAAGGCGAAAAATGTGCCAAGGC
GATTGAGAAAGTTTTGCTCCCAATAGGCATGAATGCTACTTCAGTCCCCC
CTCGCCCTGATGAGGACGAGTCCCTTCCACGAGCATCTCCTCTTCCGATT
GAAACAATTTATACCAAAGAAGCCCTGCAGGACGAAATTATTTCACCATT
GCCGGGATATAAAGATGACACAGACTTTCGACAGTTTTCCGGCTACCTCC
CGATCACAAGCAGCAAGAACATTTTTTATTGGTACGTGGAGGCCGTCGAC
ACCCCCGAGAGCGCCCCGCTGGTATTCTGGACGAACGGAGGGCCCGGATG
CAGCGGTCTGTTCGGCTTCCTGGCCGAGCACGGTCCGTTTAGGCCGTTAG
AGGACGGGCAGACGCTGGTGCGTAACCCTTACAGCTGGAACCGTGTGGCC
AACATGCTGTACGTGGAGCAACCCGTGACGGTGGGCTTCAGCTACTCGAG
CGAGCAGGTGGACAAGGCGGCCTTTGGGGACGACCAGTCGGCCCTGGACA
ACTTCCGCGTCATACAAAGCTTCCTGAGCCGTTACCCGCACCTTCGCTCG
CATGAGTTGTACCTGTCAGGGGAGTCGTACGGGGGCCACTACCTTCCCTC
GCTCGCCCGCTTTATCCTCGACAAGAACGCCGCGCCAGATCCAACCTCCC
CCCCCCTCAACCTCCAGGGCTTCTTGGTCGGGAACCCCTCCACGGACCCC
GTCTTCCAGCTGCTCGGCCAGGTGGAGACCCTGGAGGCGCGCGGCCTCCT
CCCCCCGGCCCTGTCCCGCCGATGGGCCGACGAATGCGCCGCCACTCCCA
CGGTCGTGCACCTGGGGTCCATGTCCTGCATGCAGCTCCAGCGAGAGATC
CTAGAGGCAGTGGAGGCCTTGGATTTGTACAGCATCTCTACCGCACCCTG
CCGCCTGGTCTTGGACGCGGAGGGCCTGGCGCTCGGGGAGAGGGTCAGGA
ATGCGACGGCCGCAGTGGCCTCCGCTGGGGCAAGTCAAGCCGTCAAGGAA
TTTGTGCGAGGGCCCCAGGCTCGGAGAGAGGGTAAAGGTACTGTGGGCTC
CTGCCTGGGTGATCCAAAGCTGTGGACGGAGCTCGTCAGGGCCAAGGGAG
CCCTTTCTGCCGCCGCGGGGGCGGGGGAGCGAGAGCCTGCCGGTGGGGGC
CCGGTCGACGAGGCAGCCCCAGCGGGTCCTGCGGACGAGAAGGTCTCCCT
GCGGGCCGCGCCGAGCCCCGCCCGTGAGCGAGGCTCGGGCGCGCCCCAGG
ATCGCCGTCTCCGGCCCCTCTCCCCCTCACTTTCCGCGAAGAATGCCGAA
GAGCCGGCCGTGGGCCCCGGTCTCCCCACCGCCGCCCCCCTGGCTTACGA
CAGCTGTCAAGCCGTGTATGGCGCCCGGTATTTGAACAGAGCGGATGTGA
AGGCAGCGCTCCATGCCTCAGAGGACGTGGCCTGGGAGGACTGCTCTTTC
CTGGTACTCGCCAATTTTCGGCGAAGCGACTGGTCCACATTGCTTGAGCC
GACGTTCAAGAGCCTTGTTGGGGGCGAGAAGGGCGAAGGGGAGAGGACGG
GGCTGCGGGTGTTGCTGTACTCAGGAGACGACGACACGGTGTGCAGCAGT
AGGGGCACGGAGCTCTGGCTAGAGTCCTTGGCGTGGGGAGCGGAGAGAGC
GTGGGCTCCTTGGTTTGTAAGAGGGGCGGCAGCGGGCGGGAGAGAAGGGG
GCAGGGAAGCCCTCCCTGCGGGCATGATGACCAAGTACAAGAACGGCCTG
GTCTTCGCCACACTGGAGGGGGCGGGCCACGCCGTGCCCAGCTTTAAGCC
CCGCGAGGCCTTTTTCCTCTTTTCGGAGTACTTGTACGACCGCCTTTAAA
TGCACATTGCAGATAGCCGGGAGATGGGATGGCGACTCCCTGGGCGCAGG
AGGTGCTGCTGGGGAACGCAAAGAAAAGACTCCAGCATGATTCTGTTGGG
ATTGCGCTTTCTACTATTTTGTTCCGCCTGGGGAAACACCCATTTGCGCA
CAGCTGGACCCCTCGACAAAGATCTTCAAGCGGCGCTTCCCCCTGCAACT
GATTTGCTTTCGATGCCGACGGGTTTGACGAAAGGCGAAAAATGTGCCAA
GGCGATTGAGAAAGTTTTGCTCCCAATAGGCATGAATGCTACTTCAGTCC
CCCCTCGCCCTGATGAGGACGAGTCCCTTCCACGAGCATCTCCTCTTCCG
ATTGAAACAATTTATACCAAAGAAGCCCTGCAGGACGAAATTATTTCACC
ATTGCCGGGATATAAAGATGACACAGACTTTCGACAGTTTTCCGGCTACC
TCCCGATCACAAGCAGCAAGAACATTTTTTATTGGTACGTGGAGGCCGTC
GACACCCCCGAGAGCGCCCCGCTGGTATTCTGGACGAACGGAGGGCCCGG
ATGCAGCGGTCTGTTCGGCTTCCTGGCCGAGCACGGTCCGTTTAGGCCGT
TAGAGGACGGGCAGACGCTGGTGCGTAACCCTTACAGCTGGAACCGTGTG
GCCAACATGCTGTACGTGGAGCAACCCGTGACGGTGGGCTTCAGCTACTC
GAGCGAGCAGGTGGACAAGGCGGCCTTTGGGGACGACCAGTCGGCCCTGG
ACAACTTCCGCGTCATACAAAGCTTCCTGAGCCGTTACCCGCACCTTCGC
TCGCATGAGTTGTACCTGTCAGGGGAGTCGTACGGGGGCCACTACCTTCC
CTCGCTCGCCCGCTTTATCCTCGACAAGAACGCCGCGCCAGATCCAACCT
CCCCCCCCCTCAACCTCCAGGGCTTCTTGGTCGGGAACCCCTCCACGGAC
CCCGTCTTCCAGCTGCTCGGCCAGGTGGAGACCCTGGAGGCGCGCGGCCT
CCTCCCCCCGGCCCTGTCCCGCCGATGGGCCGACGAATGCGCCGCCACTC
CCACGGTCGTGCACCTGGGGTCCATGTCCTGCATGCAGCTCCAGCGAGAG
ATCCTAGAGGCAGTGGAGGCCTTGGATTTGTACAGCATCTCTACCGCACC
CTGCCGCCTGGTCTTGGACGCGGAGGGCCTGGCGCTCGGGGAGAGGGTCA
GGAATGCGACGGCCGCAGTGGCCTCCGCTGGGGCAAGTCAAGCCGTCAAG
GAATTTGTGCGAGGGCCCCAGGCTCGGAGAGAGGGTAAAGGTACTGTGGG
CTCCTGCCTGGGTGATCCAAAGCTGTGGACGGAGCTCGTCAGGGCCAAGG
GAGCCCTTTCTGCCGCCGCGGGGGCGGGGGAGCGAGAGCCTGCCGGTGGG
GGCCCGGTCGACGAGGCAGCCCCAGCGGGTCCTGCGGACGAGAAGGTCTC
CCTGCGGGCCGCGCCGAGCCCCGCCCGTGAGCGAGGCTCGGGCGCGCCCC
AGGATCGCCGTCTCCGGCCCCTCTCCCCCTCACTTTCCGCGAAGAATGCC
GAAGAGCCGGCCGTGGGCCCCGGTCTCCCCACCGCCGCCCCCCTGGCTTA
CGACAGCTGTCAAGCCGTGTATGGCGCCCGGTATTTGAACAGAGCGGATG
TGAAGGCAGCGCTCCATGCCTCAGAGGACGTGGCCTGGGAGGACTGCTCT
TTCCTGGTACTCGCCAATTTTCGGCGAAGCGACTGGTCCACATTGCTTGA
GCCGACGTTCAAGAGCCTTGTTGGGGGCGAGAAGGGCGAAGGGGAGAGGA
CGGGGCTGCGGGTGTTGCTGTACTCAGGAGACGACGACACGGTGTGCAGC
AGTAGGGGCACGGAGCTCTGGCTAGAGTCCTTGGCGTGGGGAGCGGAGAG
AGCGTGGGCTCCTTGGTTTGTAAGAGGGGCGGCAGCGGGCGGGAGAGAAG
GGGGCAGGGAAGCCCTCCCTGCGGGCATGATGACCAAGTACAAGAACGGC
CTGGTCTTCGCCACACTGGAGGGGGCGGGCCACGCCGTGCCCAGCTTTAA
GCCCCGCGAGGCCTTTTTCCTCTTTTCGGAGTACTTGTACGACCGCCTTT
AAATGCACATTGCAGATAGCCGGGAGATGGGATGGCGACTCCCTGGGCGC
AGGAGGTGCTGCTGGGGAACGCAAAGAAAAGACTCCAGCATGATTCTGTT
GGGATTGCGCTTTCTACTATTTTGTTCCGCCTGGGGAAACACCCATTTGC
GCACAG back to top
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