EWM28729.1, cds1849 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM28729.1 vs. NCBI_GenBank
Match: gi|585111152|gb|EWM28729.1| (uncharacterized protein Naga_100002g170 [Nannochloropsis gaditana]) HSP 1 Score: 469.544 bits (1207), Expect = 2.188e-167 Identity = 230/230 (100.00%), Postives = 230/230 (100.00%), Query Frame = 0 Query: 1 MRLSFTFMETAIRIEGASRSSKFQDGLALYSRLEPCLYPSLNPALVLGHDISHHCPSLMYGELSGETLVKALGLIDELEALPREGEGSLIDIGSGIGKQIFTAACVYAWKRCIGVEIYEKRAKLAEQALQRWKSKQSSIPMLRTRVVDFACDDIVEIEMEGFQVILLVSAAFTDTLMRSIAKVLDSQAVGTLAICITKALPGPKWEVVHKSEREEPWGRAWLIIQKKILA 230 MRLSFTFMETAIRIEGASRSSKFQDGLALYSRLEPCLYPSLNPALVLGHDISHHCPSLMYGELSGETLVKALGLIDELEALPREGEGSLIDIGSGIGKQIFTAACVYAWKRCIGVEIYEKRAKLAEQALQRWKSKQSSIPMLRTRVVDFACDDIVEIEMEGFQVILLVSAAFTDTLMRSIAKVLDSQAVGTLAICITKALPGPKWEVVHKSEREEPWGRAWLIIQKKILA Sbjct: 1 MRLSFTFMETAIRIEGASRSSKFQDGLALYSRLEPCLYPSLNPALVLGHDISHHCPSLMYGELSGETLVKALGLIDELEALPREGEGSLIDIGSGIGKQIFTAACVYAWKRCIGVEIYEKRAKLAEQALQRWKSKQSSIPMLRTRVVDFACDDIVEIEMEGFQVILLVSAAFTDTLMRSIAKVLDSQAVGTLAICITKALPGPKWEVVHKSEREEPWGRAWLIIQKKILA 230
BLAST of EWM28729.1 vs. NCBI_GenBank
Match: gi|585111153|gb|EWM28730.1| (uncharacterized protein Naga_100002g170 [Nannochloropsis gaditana] >gi|585111154|gb|EWM28731.1| uncharacterized protein Naga_100002g170 [Nannochloropsis gaditana] >gi|585111155|gb|EWM28732.1| uncharacterized protein Naga_100002g170 [Nannochloropsis gaditana]) HSP 1 Score: 468.003 bits (1203), Expect = 5.789e-166 Identity = 229/229 (100.00%), Postives = 229/229 (100.00%), Query Frame = 0 Query: 2 RLSFTFMETAIRIEGASRSSKFQDGLALYSRLEPCLYPSLNPALVLGHDISHHCPSLMYGELSGETLVKALGLIDELEALPREGEGSLIDIGSGIGKQIFTAACVYAWKRCIGVEIYEKRAKLAEQALQRWKSKQSSIPMLRTRVVDFACDDIVEIEMEGFQVILLVSAAFTDTLMRSIAKVLDSQAVGTLAICITKALPGPKWEVVHKSEREEPWGRAWLIIQKKILA 230 RLSFTFMETAIRIEGASRSSKFQDGLALYSRLEPCLYPSLNPALVLGHDISHHCPSLMYGELSGETLVKALGLIDELEALPREGEGSLIDIGSGIGKQIFTAACVYAWKRCIGVEIYEKRAKLAEQALQRWKSKQSSIPMLRTRVVDFACDDIVEIEMEGFQVILLVSAAFTDTLMRSIAKVLDSQAVGTLAICITKALPGPKWEVVHKSEREEPWGRAWLIIQKKILA Sbjct: 58 RLSFTFMETAIRIEGASRSSKFQDGLALYSRLEPCLYPSLNPALVLGHDISHHCPSLMYGELSGETLVKALGLIDELEALPREGEGSLIDIGSGIGKQIFTAACVYAWKRCIGVEIYEKRAKLAEQALQRWKSKQSSIPMLRTRVVDFACDDIVEIEMEGFQVILLVSAAFTDTLMRSIAKVLDSQAVGTLAICITKALPGPKWEVVHKSEREEPWGRAWLIIQKKILA 286
BLAST of EWM28729.1 vs. NCBI_GenBank
Match: gi|553188488|ref|XP_005854807.1| (hypothetical protein NGA_2076020 [Nannochloropsis gaditana CCMP526] >gi|553192876|ref|XP_005855662.1| hypothetical protein NGA_2076010 [Nannochloropsis gaditana CCMP526] >gi|422293399|gb|EKU20699.1| hypothetical protein NGA_2076010 [Nannochloropsis gaditana CCMP526] >gi|422294253|gb|EKU21553.1| hypothetical protein NGA_2076020 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 466.463 bits (1199), Expect = 2.182e-165 Identity = 228/229 (99.56%), Postives = 228/229 (99.56%), Query Frame = 0 Query: 2 RLSFTFMETAIRIEGASRSSKFQDGLALYSRLEPCLYPSLNPALVLGHDISHHCPSLMYGELSGETLVKALGLIDELEALPREGEGSLIDIGSGIGKQIFTAACVYAWKRCIGVEIYEKRAKLAEQALQRWKSKQSSIPMLRTRVVDFACDDIVEIEMEGFQVILLVSAAFTDTLMRSIAKVLDSQAVGTLAICITKALPGPKWEVVHKSEREEPWGRAWLIIQKKILA 230 RLSFTFMETAIRIEGASRSSKFQDGLALYSRLEPCLYPSLNPALVLGHDISHHCPSLMYGELSGETLVKALGLIDELEALPREGEGSLIDIGSGIGKQIFTAACVY WKRCIGVEIYEKRAKLAEQALQRWKSKQSSIPMLRTRVVDFACDDIVEIEMEGFQVILLVSAAFTDTLMRSIAKVLDSQAVGTLAICITKALPGPKWEVVHKSEREEPWGRAWLIIQKKILA Sbjct: 58 RLSFTFMETAIRIEGASRSSKFQDGLALYSRLEPCLYPSLNPALVLGHDISHHCPSLMYGELSGETLVKALGLIDELEALPREGEGSLIDIGSGIGKQIFTAACVYVWKRCIGVEIYEKRAKLAEQALQRWKSKQSSIPMLRTRVVDFACDDIVEIEMEGFQVILLVSAAFTDTLMRSIAKVLDSQAVGTLAICITKALPGPKWEVVHKSEREEPWGRAWLIIQKKILA 286
BLAST of EWM28729.1 vs. NCBI_GenBank
Match: gi|585111156|gb|EWM28733.1| (uncharacterized protein Naga_100002g170 [Nannochloropsis gaditana]) HSP 1 Score: 454.521 bits (1168), Expect = 1.586e-161 Identity = 223/223 (100.00%), Postives = 223/223 (100.00%), Query Frame = 0 Query: 8 METAIRIEGASRSSKFQDGLALYSRLEPCLYPSLNPALVLGHDISHHCPSLMYGELSGETLVKALGLIDELEALPREGEGSLIDIGSGIGKQIFTAACVYAWKRCIGVEIYEKRAKLAEQALQRWKSKQSSIPMLRTRVVDFACDDIVEIEMEGFQVILLVSAAFTDTLMRSIAKVLDSQAVGTLAICITKALPGPKWEVVHKSEREEPWGRAWLIIQKKILA 230 METAIRIEGASRSSKFQDGLALYSRLEPCLYPSLNPALVLGHDISHHCPSLMYGELSGETLVKALGLIDELEALPREGEGSLIDIGSGIGKQIFTAACVYAWKRCIGVEIYEKRAKLAEQALQRWKSKQSSIPMLRTRVVDFACDDIVEIEMEGFQVILLVSAAFTDTLMRSIAKVLDSQAVGTLAICITKALPGPKWEVVHKSEREEPWGRAWLIIQKKILA Sbjct: 1 METAIRIEGASRSSKFQDGLALYSRLEPCLYPSLNPALVLGHDISHHCPSLMYGELSGETLVKALGLIDELEALPREGEGSLIDIGSGIGKQIFTAACVYAWKRCIGVEIYEKRAKLAEQALQRWKSKQSSIPMLRTRVVDFACDDIVEIEMEGFQVILLVSAAFTDTLMRSIAKVLDSQAVGTLAICITKALPGPKWEVVHKSEREEPWGRAWLIIQKKILA 223
BLAST of EWM28729.1 vs. NCBI_GenBank
Match: gi|675171489|ref|XP_008894629.1| (hypothetical protein PPTG_03698 [Phytophthora parasitica INRA-310] >gi|566018021|gb|ETI40932.1| hypothetical protein F443_13770 [Phytophthora parasitica P1569] >gi|567955400|gb|ETK81033.1| hypothetical protein L915_13423 [Phytophthora parasitica] >gi|567984082|gb|ETL34459.1| hypothetical protein L916_13311 [Phytophthora parasitica] >gi|568013552|gb|ETL87729.1| hypothetical protein L917_13130 [Phytophthora parasitica] >gi|568043683|gb|ETM40957.1| hypothetical protein L914_13218 [Phytophthora parasitica] >gi|568106136|gb|ETN20772.1| hypothetical protein PPTG_03698 [Phytophthora parasitica INRA-310] >gi|570321686|gb|ETO69634.1| hypothetical protein F444_13825 [Phytophthora parasitica P1976] >gi|570945465|gb|ETP10722.1| hypothetical protein F441_13696 [Phytophthora parasitica CJ01A1] >gi|570977228|gb|ETP38880.1| hypothetical protein F442_13620 [Phytophthora parasitica P10297]) HSP 1 Score: 93.2041 bits (230), Expect = 1.539e-19 Identity = 56/178 (31.46%), Postives = 98/178 (55.06%), Query Frame = 0 Query: 57 SLMYGELSGETLVKALGLIDELEALPREGEGSLIDIGSGIGKQIFTAACVYAWKRCIGVEIYEKRAKLAEQALQRWKSK-QSSIPMLRTRV-VDFACDDIV---EIEMEGFQVILLVSAAFTDTLMRSIAKVLDSQAVGTLAICITKALPGPKWEVVHKSEREEPWGRAWLIIQKKIL 229 SL+YGE+ ET+ L+ + + G+ DIGSG GK + AA ++ + +C G+E+ + +A + L RW+ + S+P + V V F D V +I + ++ S F+D+L+++I+ D AVG+ + +TK LP +W+ +H+ + WGRA +I+QKK+ Sbjct: 54 SLVYGEIPFETVDAIFQLMRMQFGVLLDKGGNFYDIGSGCGKVVMAAALLHDFSKCCGIEVLDGLHAVALKVLDRWRFEILDSLPATKADVDVGFVKGDAVKRPDIWRDA-TLVFCNSTCFSDSLIQAISTEADQLAVGSYFVTVTKPLPSTRWQAMHEEKFHMSWGRATVIVQKKMF 230
BLAST of EWM28729.1 vs. NCBI_GenBank
Match: gi|695452341|ref|XP_009535944.1| (hypothetical protein PHYSODRAFT_525142 [Phytophthora sojae] >gi|348669488|gb|EGZ09311.1| hypothetical protein PHYSODRAFT_525142 [Phytophthora sojae]) HSP 1 Score: 85.8853 bits (211), Expect = 8.612e-17 Identity = 56/189 (29.63%), Postives = 97/189 (51.32%), Query Frame = 0 Query: 57 SLMYGELSGETLVKALGLIDELEALPREGEGSLIDIGSGIGK------------QIFTAACVYAWKRCIGVEIYEKRAKLAEQALQRWKSKQ-SSIPMLRTRV-VDFACDDIVEIE--MEGFQVILLVSAAFTDTLMRSIAKVLDSQAVGTLAICITKALPGPKWEVVHKSEREEPWGRAWLIIQKKIL 229 SL+YGE+ ET+ L+ + + G+ DIGSG GK Q+ AA ++ + +C G+E+ + +A + L RW+ + S+P + + + FA D V+ ++ S F+D+L+++I+ D AVG+ + +TK L +W+ VH+ + WGRA +IIQKK+ Sbjct: 54 SLVYGEIPFETVDAIFQLMRTQFGVLLDKGGNFYDIGSGCGKVVRAGNVLTVEWQVMAAALLHDFSKCCGIEVLDGLHAVALKVLDRWRYQMLDSLPATKADLDLGFAKADAVKRPDIWRDATLVFCNSTCFSDSLIQAISTEADQLAVGSYFVTVTKPLQSTRWQAVHEEKFHMSWGRATVIIQKKMF 242
BLAST of EWM28729.1 vs. NCBI_GenBank
Match: gi|301109122|ref|XP_002903642.1| (conserved hypothetical protein [Phytophthora infestans T30-4] >gi|262097366|gb|EEY55418.1| conserved hypothetical protein [Phytophthora infestans T30-4]) HSP 1 Score: 84.3445 bits (207), Expect = 3.218e-16 Identity = 57/188 (30.32%), Postives = 97/188 (51.60%), Query Frame = 0 Query: 57 SLMYGELSGETLVKALGLIDELEALPREGEGSLIDIGSGIGK----------QIFTAACVYAWKRCIGVEIYEKRAKLAEQALQRWKSKQ-SSIPMLRTRV-VDFACDDIV---EIEMEGFQVILLVSAAFTDTLMRSIAKVLDSQAVGTLAICITKALPGPKWEVVHKSEREEPWGRAWLIIQKKIL 229 SL+YGE+ ET+ L+ + + GS DIGSG GK ++ AA ++ + +C GVE+ + +A + L RW+ + S+P + V V F D V +I + ++ S F+D+L+++I+ D AVG+ + +TK L +W+ +H+ + WGRA +I QKK+ Sbjct: 54 SLVYGEIPFETVDAIFQLMRTQFGVLLDKGGSFYDIGSGCGKVVRVGYWFAGEVMAAALLHDFSKCCGVEVLDGLHAVALKVLDRWRFEMLDSLPATKVDVDVGFVKGDAVKRPDIWRDA-TLVFCNSTCFSDSLIQAISTEADQLAVGSYFVTVTKPLLSTRWQAMHEEKFHMSWGRATVIFQKKMF 240
BLAST of EWM28729.1 vs. NCBI_GenBank
Match: gi|1214673630|gb|OWY96345.1| (hypothetical protein PHMEG_00033409 [Phytophthora megakarya]) HSP 1 Score: 83.1889 bits (204), Expect = 1.094e-15 Identity = 55/190 (28.95%), Postives = 97/190 (51.05%), Query Frame = 0 Query: 57 SLMYGELSGETLVKALGLIDELEALPREGEGSLIDIGSGIGK------------QIFTAACVYAWKRCIGVEIYEKRAKLAEQALQRWKSKQ-SSIPMLRTRV-VDFACDDIV---EIEMEGFQVILLVSAAFTDTLMRSIAKVLDSQAVGTLAICITKALPGPKWEVVHKSEREEPWGRAWLIIQKKIL 229 SL+YGE+ ET+ L+ + + G DIGSG GK ++ AA ++ + +C G+E+ + A + L RW+ + +P + V V FA +D V +I + ++ S F+D+L+++I+ D AVG+ + +TK L +W+ +H+ + WGRA +I+QKK+ Sbjct: 53 SLVYGEIPFETVDAIFQLMRTQFGVLLDKGGRFYDIGSGCGKVVGAGALAVTRYEVMAAALLHDFSKCCGIEVLDGLHAAAMKVLDRWRYEMLDELPATKVDVEVGFAKEDAVKRPDIWRDA-TLVFCNSTCFSDSLIQAISTEADQLAVGSYFVTVTKPLQSTRWQAMHEEKFHMSWGRATVIVQKKMF 241
BLAST of EWM28729.1 vs. NCBI_GenBank
Match: gi|299117037|emb|CBN73808.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 80.4925 bits (197), Expect = 1.866e-14 Identity = 47/161 (29.19%), Postives = 81/161 (50.31%), Query Frame = 0 Query: 57 SLMYGELSGETLVKALGLI-DELEALPREGEGSLIDIGSGIGKQIFTAACVYAWKRCIGVEIYEKRAKLAEQALQRWKSK-QSSIPMLRTR----VVDFACDDIVEIEMEGFQVILLVSAAFTDTLMRSIAKVLDSQAVGTLAICITKALPGPKWEVVHKS 211 +L YGE+S L + D LP E +G D+G G GK +F AA ++ W RCIG+EI + +AL+RW+ + + + T+ ++F C D ++ V+ S F D LM+ +A+ + G + + +T +P P +EV+ ++ Sbjct: 98 ALTYGEVSATGFSDILAKVQDSYGGLP-EKDGVFYDLGCGTGKPVFAAATMHPWHRCIGMEILGDLHGICLKALERWEGGLRHKVTVGETKGGAAEIEFVCGDFTVLDWSDGDVVFANSTCFGDDLMKKLAQGAAALKEGAIVVTMTDPVPSPAFEVLEET 257
BLAST of EWM28729.1 vs. NCBI_GenBank
Match: gi|1208984437|ref|WP_088245087.1| (hypothetical protein [Chlamydiales bacterium SCGC AG-110-M15] >gi|1206876409|emb|SCC90909.1| Uncharacterized protein SCG7109_BF_00050 [Chlamydiales bacterium SCGC AG-110-M15]) HSP 1 Score: 75.0998 bits (183), Expect = 5.852e-13 Identity = 45/173 (26.01%), Postives = 88/173 (50.87%), Query Frame = 0 Query: 57 SLMYGELSGETLVKALGLIDELEALPREGEGSLIDIGSGIGKQIFTAACVYAWKRCIGVEIYEKRAKLAEQALQRWKSKQ-SSIPMLRTRV-VDFACDDIVEIEMEGFQVILLVSAAFTDTLMRSIAKVLDSQAVGTLAICITKALPGPKWEVVHKSEREEPWGRAWLIIQKK 227 + +YGE ++ K ++D P+ E +D+G+G+GKQ+ TAA +Y +K+ G+EI K ++ L++++ K S +P + +DF + + + V + S +++ +M IA+ + G+ + +TK LP ++E +H WG + + I KK Sbjct: 39 TYVYGEAELHSIEKIFQIVD-----PQPDE-VFVDLGAGVGKQVLTAALLYDFKKVRGIEILSDLHKTSKDILEQFRKKYGSKLPDGKEMPDIDFLKGNFLRADFSEADVAYMCSTCYSEEMMEGIARGAEHMKPGSRVVTLTKPLPSDQYEEIHHEFYPMSWGTSQVFIYKK 205 The following BLAST results are available for this feature:
BLAST of EWM28729.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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