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Properties
| Property Name | Value |
|---|
| Product | glutathione transferase |
| Orig transcript id | gnl|cribi|Naga_100199g10.9711.mrna |
| Orig protein id | gnl|cribi|Naga_100199g10.9711 |
| Gbkey | mRNA |
| Note | encoded by transcript variant 2; alternatively spliced |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002458.1 | supercontig | CM002458.1:262566..265827 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna1836 ID=rna1836|Name=rna1836|organism=Nannochloropsis gaditana|type=mRNA|length=1043bp
TGTTTCTGCGTGTAGCTCATCCGCCAGTTTTTTTCCAAAGCTCTTTTATG
TCCACGGCAGGAGCTTGAACGACCCTTCCGAACAGCAACATGATGCCTTC
ACGCCTCAAGGTGATGATCACCGTGCTCCTGTTCGTCACCATAACCGTGA
CCTCCTCCGTTGCTGAAAGCGACCCGGCCCCTGCTCATGATCAAGTACGA
AAGCATAAGCGGCATCGCCGTGGGTGGGTGCTGCTGGGACATGAGACGGC
TGCGGAGGAATGGAGCCGGTTTAAGCGATATTTCCGTAAAGTGTACCATT
CGCCATCGGAAGAAGAGCACCGCTTCCATGTATTCGCCTCCTCTTTAGCC
GAGGCCCGGGTCCGCAACGCGCAAAACGTGGCGGCCGGCGGGGAGCATGT
CTTCGGTGTGACGCGTTTTTCGGATGAGACCCCCGAAGAGTTCAACAGAC
GGTACAAAGGGCGCAAAGGGCATGGCCGGGGAGTGGTGTCGGGGGCGGAG
GTGCGGCGACCGCTCGCCTACACGTCGGCACTGATGGGAAGGGAAGGACA
GGAGGGGGGGAGCGTGGAGGTATCGCGTCCCCCACAGGTGGATTGGGTGG
CAGCGGGGGCAACGACCAGTATTGGAAACCAGGGTCAATGTGGGTCCTGC
TGGGCCTTCTCCGCCACTTCCCAGATCGAATCCGCCTTCATCTTGGCCGG
GCACGCCCCCTGGCGCCTGTCGGTGCAGCAAGTCACCTCGTGCACCTCGG
GAGGCTTCGGCTGCGGGGGCGGCGACACCATTCAAGCCTATGAACAGCTG
TTGGGGATGGAGACCAAGACAGGCATGCCCATCCCCGGTTTGGTCGCGGC
GGCCATGGCCCCCTACCAGCAGAGCATGTACCAGGAGTGCCTTTCCCCCC
TCTGCACGGAACGGTGCCGGCTTCGGCAGATTGGTAATTTGAGCGTGGCC
GCGGAGATGGAGGCATTGACTGGTGAGGGAGCAGGCGCTTTGGGCACGCA
GGGCAGCGCAAGGACGCGGGGGAGAGAGTTTTTCTTTTTTTAA back to topprotein sequence of rna1836 >rna1836-protein ID=rna1836-protein|Name=rna1836|organism=Nannochloropsis gaditana|type=polypeptide|length=507bp
MRSFFRLLPSSLLLLLLLPSPRPTTPFTLPSSPFPRRRLLSLSPAIPPSP
PPPPPSYKGLRLLEWTNGLISQKALVKTARTSWNMLWKVHFVPSLRSTSL
YLYINSCPTLSLLSPASLPPVPCPSRLMRGSVHRFSVVSLFPLSLPLPLP
LSLPRQILMTELAPQGKDGEYVRPTYSFTDSLGSPAFPLEEGRYHLYVGN
ACPWCHRLTLAHALRGLSQSQLSYSYAIDDPERASRGGWAFDTMGEGGGG
EAGAPFADPVFGCRDLREVYDLCAPGYTGRCTAPVLVDVKRRRIVNNESS
DLLRFLNLFPPPPGQTHPDVDLFPPSLRPRILEINAWVYPLINNGVYRCG
FATSQAAYDRSVRDVFRGLESVEAILTDQRFLAGDVLTEADVRLFPTVIR
FDAVYASLFKCAGKRIADYPNLTQWMREVYQIPGVRTTVDIPALIRSYFV
QLFPLNPSGICPQGPTEEDLKVLERHDREERFVKAGGGGSIFATKGEEDR
EGGTEGT back to topmRNA from alignment at CM002458.1:262566..265827+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna1836 ID=rna1836|Name=rna1836|organism=Nannochloropsis gaditana|type=mRNA|length=3262bp|location=Sequence derived from alignment at CM002458.1:262566..265827+ (Nannochloropsis gaditana)
GGGTGTGCTCATGACAGAGGCGTGTGGCAGCTTTGCTTACGACGCCCTCG
ACCATTGTGTGAACATCGTGGGCTACAACGACGAGGCACCCGAACCCTAC
TTTGTGGTGAGCActccctgcccccgtcctcgccatccAATGTCCTACCG
CTCCGGCCaaggctccctcccttccctccccctttcctttaaccctaacc
cttaccctaaccctttctccctcctcaggtcCGGAACTCCTGGTCGACGT
TgtggggcgaggacgggcacatcctcctctcttcgaAGAACAACACATGC
GGCCTTGCCAACGAGGCCACTTTCGTCACGATTGCCCCGGAGGattaggg
agggaagaagggagggaggggaggaaggaagtctGCCACTTTCGTCACGA
TTGCCCCGGAGGattagggagggaagaagggagggaggggaggaaggaag
tctGCCACTTTCGTCACGATTGCCCCGGAGGattagggagggaagaaggg
agggaggggaggaaggaagtctggtggagggggttAGGGTTTAGGagcga
ggacgtgatgggatAGGAGGGACgtgagagggtgggaggtgtGAAAAGGC
GACAAgtggagggcgtgctgcCTATGGCCCTCCCGAATCATCACACGCAA
ACGGGatgacgagggaaggagaagggccgCCAGGGAGAGAAATATAAGGA
ATCGTAATGGAGTAGGaggtctgggagggaggtttctccctcccttacgg
TCATTGTTTGTCATGCGTCCGCCCCGATGGCCGGAGGGAGTAAGCCATTG
TGGAGGGCAAGTAGGGTCCCGCCCGGCTATACGATACGAtattccctcct
tgtcttggggatggggagagcTTATGACGCTTAGCCCCCGGGCTGGGCAG
CTTACGGAGTGGATCGATGTATTTAAAGTTGAACTTAGGAgctcggcgga
ggggggagaggggggaggaagggagggtaagacaggaggaggaatgccaG
AAGGTGGCCCGCGGCGAAGCGAGGAAATAAGGACCGTCAAGCGTGTGCCT
GGCGTTGGAGACGAAGCGAAGCGAAGTTTGGCTGGTGCGGCGCATGTTCT
CACGAGAGCACTCGTTGCTTTCCTCTGCGCGCCAGCTCTCGTCTATAGAT
TACCTCtgtcctgtcctcccctcacctACTTGCCACGttcatttctccct
ctctttttccatcccGCACAGAGATGCGCTCCTTCTTtcggctcctccct
tcctccctcctcctcctcctcctcctcccttcccctcgtcctaCCACCCC
CTTCACCCTGCCGTCCAGCCCTTTCCCACGTCGTcgcctgctctccctct
cccccgccattcccccctcgcctcctcctcctcctccctcctacaaaggc
cttcgccttctggAATGGACGAACGGCCTCATTTCCCAGAAGGCTCTGGT
CAAGACGGCGCGGACCTCTTGGAACATGCTCTGGAAGGTGCACTTTGTCC
CCTCGCTCCGCTCCACCTCGTTATATTTGTACATAAATTCAtgtcccacc
ctctccctcctttcaccagcttccctcccacctgtaCCTTGTCCTTCTCG
TTTGATGAGAGGCTCTGTCCACCGCTTTTCCGTggtctctcttttccctc
tttccctccctcttcccctccctctttccctcccgcgccagATCCTGATG
ACCGAGCTCGCCCCTCAAGGCAAAGACGGTGAATATGTCCGCCCGACGTA
CTCCTTCACGGACTCGCTGGGCTCCCCCGCTTTTCCCCTGGAAGAAGGCC
GCTACCATCTTTATGTGGGTAACGCCTGCCCCTGGTGCCACCGACTCAcc
ctcgcccacgccctgCGCGGCCTCTCCCAATCCCAACTTTCCTACTCCTA
CGCGATCGACGACCCCGAGAGAGCCTcccgggggggctgggccTTCGACA
CgatgggagaaggcggcggaggggaggcgggagctcCATTCGCCGACCCC
GTCTTTGGGTGCCGCGACTTGAGGGAGGTGTACGACCTCTGCGCCCCGGG
CTACACCGGCCGGTGCACGGCGCCCGTCCTGGTGGACGTTAAACGCCGCC
GGATCGTCAACAACGAAAGCagcgacctcctccgcttcctcaacctcttc
cctccccccccgggacaGACTCACCCTGACGTGGatctcttcccgccctc
cctgcggccTCGCATCCTGGAGATCAACGCCTGGGTGTACCCGCTCATCA
ACAACGGTGTCTACCGCTGTGGCTTTGCCACCTCCCAAGCTGCCTACGAC
CGGAGCGTCCGAGACGTCTTCCGGGGCCTGGAGAGCGTGGAAGCGATCTT
GACGGACCAGCGATTTTTGGCGGGAGATGTCCTCACGGAAGCCGatgtga
ggaggggggaagagggcaagggggggggcgacgcgcgaagaggaggattt
tCAGGTTGTCTGTCGCTCCAGCATCTCCGCACGTTTAATTCCAGCACTTC
TATGAAATGCATTACGGACGTGTCTTTCATCCATTCatttgccccttcct
ccccctgctttccccttcccggaCCTCCGGCTGTGCAGGTCCGCTTGTTC
CCCACCGTTATCAGGTTTGACGCGGTGTATGCATCCCTATTCAAATGTGC
CGGGAAGCGAATTGCGGACTACCCGAATTTGACGCAGTGGATGAGGGAGG
TATATCAAATCCCAGGGGTGCGGACCACGGTAGATATACCAGCGCTGATA
CGAAGCTATTTCGTCCAGGTAGGAGGCAAATTGAtccggaggggaggctg
aggGAGTATCcacaagaaaaaaatgagaggcctgagaggtggagggagga
agggacaggggtGTCTCCACCTGATTCTCacgtcgtcatcctctcccctc
ccccttcactcggaagctcttccccctgAATCCCTCAGGAATTTGCCCCC
AAGGCCCCACAGAAGAAGACCTTAAAGTTTTGGAAAGACACGATAGGGAG
GAGCGCTTTGTgaaagcagggggaggaggtagcaTATTTGCTAccaaggg
agaagaagacagggagggaggaaccgaAGGTACTTAAAAGAAGCATCCCA
TATAAAACCAAAAATGCATCGAAAAGATACCGACAACACAGTCGAGTCCT
GCAGATATTTTAACACGTGATTTTCAGTTTAATTGAACTGTTCTGTATTG
AAAAAATCCGGCGGATGAAAGCGCCTGTGTGTAGAAAATATCCTTCGTAA
CGGTCACTCAGT back to topCoding sequence (CDS) from alignment at CM002458.1:262566..265827+ >rna1836 ID=rna1836|Name=rna1836|organism=Nannochloropsis gaditana|type=CDS|length=4572bp|location=Sequence derived from alignment at CM002458.1:262566..265827+ (Nannochloropsis gaditana)
ATGCGCTCCTTCTTtcggctcctcccttcctccctcctcctcctcctcct
cctcccttcccctcgtcctaCCACCCCCTTCACCCTGCCGTCCAGCCCTT
TCCCACGTCGTcgcctgctctccctctcccccgccattcccccctcgcct
cctcctcctcctccctcctacaaaggccttcgccttctggAATGGACGAA
CGGCCTCATTTCCCAGAAGGCTCTGGTCAAGACGGCGCGGACCTCTTGGA
ACATGCTCTGGAAGGTGCACTTTGTCCCCTCGCTCCGCTCCACCTCGTTA
TATTTGTACATAAATTCAtgtcccaccctctccctcctttcaccagcttc
cctcccacctgtaCCTTGTCCTTCTCGTTTGATGAGAGGCTCTGTCCACC
GCTTTTCCGTggtctctcttttccctctttccctccctcttcccctccct
ctttccctcccgcgccagATCCTGATGACCGAGCTCGCCCCTCAAGGCAA
AGACGGTGAATATGTCCGCCCGACGTACTCCTTCACGGACTCGCTGGGCT
CCCCCGCTTTTCCCCTGGAAGAAGGCCGCTACCATCTTTATGTGGGTAAC
GCCTGCCCCTGGTGCCACCGACTCAccctcgcccacgccctgCGCGGCCT
CTCCCAATCCCAACTTTCCTACTCCTACGCGATCGACGACCCCGAGAGAG
CCTcccgggggggctgggccTTCGACACgatgggagaaggcggcggaggg
gaggcgggagctcCATTCGCCGACCCCGTCTTTGGGTGCCGCGACTTGAG
GGAGGTGTACGACCTCTGCGCCCCGGGCTACACCGGCCGGTGCACGGCGC
CCGTCCTGGTGGACGTTAAACGCCGCCGGATCGTCAACAACGAAAGCagc
gacctcctccgcttcctcaacctcttccctccccccccgggacaGACTCA
CCCTGACGTGGatctcttcccgccctccctgcggccTCGCATCCTGGAGA
TCAACGCCTGGGTGTACCCGCTCATCAACAACGGTGTCTACCGCTGTGGC
TTTGCCACCTCCCAAGCTGCCTACGACCGGAGCGTCCGAGACGTCTTCCG
GGGCCTGGAGAGCGTGGAAGCGATCTTGACGGACCAGCGATTTTTGGCGG
GAGATGTCCTCACGGAAGCCGatGTCCGCTTGTTCCCCACCGTTATCAGG
TTTGACGCGGTGTATGCATCCCTATTCAAATGTGCCGGGAAGCGAATTGC
GGACTACCCGAATTTGACGCAGTGGATGAGGGAGGTATATCAAATCCCAG
GGGTGCGGACCACGGTAGATATACCAGCGCTGATACGAAGCTATTTCGTC
CAGctcttccccctgAATCCCTCAGGAATTTGCCCCCAAGGCCCCACAGA
AGAAGACCTTAAAGTTTTGGAAAGACACGATAGGGAGGAGCGCTTTGTga
aagcagggggaggaggtagcaTATTTGCTAccaagggagaagaagacagg
gagggaggaaccgaAGGTACTTAAATGCGCTCCTTCTTtcggctcctccc
ttcctccctcctcctcctcctcctcctcccttcccctcgtcctaCCACCC
CCTTCACCCTGCCGTCCAGCCCTTTCCCACGTCGTcgcctgctctccctc
tcccccgccattcccccctcgcctcctcctcctcctccctcctacaaagg
ccttcgccttctggAATGGACGAACGGCCTCATTTCCCAGAAGGCTCTGG
TCAAGACGGCGCGGACCTCTTGGAACATGCTCTGGAAGGTGCACTTTGTC
CCCTCGCTCCGCTCCACCTCGTTATATTTGTACATAAATTCAtgtcccac
cctctccctcctttcaccagcttccctcccacctgtaCCTTGTCCTTCTC
GTTTGATGAGAGGCTCTGTCCACCGCTTTTCCGTggtctctcttttccct
ctttccctccctcttcccctccctctttccctcccgcgccagATCCTGAT
GACCGAGCTCGCCCCTCAAGGCAAAGACGGTGAATATGTCCGCCCGACGT
ACTCCTTCACGGACTCGCTGGGCTCCCCCGCTTTTCCCCTGGAAGAAGGC
CGCTACCATCTTTATGTGGGTAACGCCTGCCCCTGGTGCCACCGACTCAc
cctcgcccacgccctgCGCGGCCTCTCCCAATCCCAACTTTCCTACTCCT
ACGCGATCGACGACCCCGAGAGAGCCTcccgggggggctgggccTTCGAC
ACgatgggagaaggcggcggaggggaggcgggagctcCATTCGCCGACCC
CGTCTTTGGGTGCCGCGACTTGAGGGAGGTGTACGACCTCTGCGCCCCGG
GCTACACCGGCCGGTGCACGGCGCCCGTCCTGGTGGACGTTAAACGCCGC
CGGATCGTCAACAACGAAAGCagcgacctcctccgcttcctcaacctctt
ccctccccccccgggacaGACTCACCCTGACGTGGatctcttcccgccct
ccctgcggccTCGCATCCTGGAGATCAACGCCTGGGTGTACCCGCTCATC
AACAACGGTGTCTACCGCTGTGGCTTTGCCACCTCCCAAGCTGCCTACGA
CCGGAGCGTCCGAGACGTCTTCCGGGGCCTGGAGAGCGTGGAAGCGATCT
TGACGGACCAGCGATTTTTGGCGGGAGATGTCCTCACGGAAGCCGatGTC
CGCTTGTTCCCCACCGTTATCAGGTTTGACGCGGTGTATGCATCCCTATT
CAAATGTGCCGGGAAGCGAATTGCGGACTACCCGAATTTGACGCAGTGGA
TGAGGGAGGTATATCAAATCCCAGGGGTGCGGACCACGGTAGATATACCA
GCGCTGATACGAAGCTATTTCGTCCAGctcttccccctgAATCCCTCAGG
AATTTGCCCCCAAGGCCCCACAGAAGAAGACCTTAAAGTTTTGGAAAGAC
ACGATAGGGAGGAGCGCTTTGTgaaagcagggggaggaggtagcaTATTT
GCTAccaagggagaagaagacagggagggaggaaccgaAGGTACTTAAAT
GCGCTCCTTCTTtcggctcctcccttcctccctcctcctcctcctcctcc
tcccttcccctcgtcctaCCACCCCCTTCACCCTGCCGTCCAGCCCTTTC
CCACGTCGTcgcctgctctccctctcccccgccattcccccctcgcctcc
tcctcctcctccctcctacaaaggccttcgccttctggAATGGACGAACG
GCCTCATTTCCCAGAAGGCTCTGGTCAAGACGGCGCGGACCTCTTGGAAC
ATGCTCTGGAAGGTGCACTTTGTCCCCTCGCTCCGCTCCACCTCGTTATA
TTTGTACATAAATTCAtgtcccaccctctccctcctttcaccagcttccc
tcccacctgtaCCTTGTCCTTCTCGTTTGATGAGAGGCTCTGTCCACCGC
TTTTCCGTggtctctcttttccctctttccctccctcttcccctccctct
ttccctcccgcgccagATCCTGATGACCGAGCTCGCCCCTCAAGGCAAAG
ACGGTGAATATGTCCGCCCGACGTACTCCTTCACGGACTCGCTGGGCTCC
CCCGCTTTTCCCCTGGAAGAAGGCCGCTACCATCTTTATGTGGGTAACGC
CTGCCCCTGGTGCCACCGACTCAccctcgcccacgccctgCGCGGCCTCT
CCCAATCCCAACTTTCCTACTCCTACGCGATCGACGACCCCGAGAGAGCC
TcccgggggggctgggccTTCGACACgatgggagaaggcggcggagggga
ggcgggagctcCATTCGCCGACCCCGTCTTTGGGTGCCGCGACTTGAGGG
AGGTGTACGACCTCTGCGCCCCGGGCTACACCGGCCGGTGCACGGCGCCC
GTCCTGGTGGACGTTAAACGCCGCCGGATCGTCAACAACGAAAGCagcga
cctcctccgcttcctcaacctcttccctccccccccgggacaGACTCACC
CTGACGTGGatctcttcccgccctccctgcggccTCGCATCCTGGAGATC
AACGCCTGGGTGTACCCGCTCATCAACAACGGTGTCTACCGCTGTGGCTT
TGCCACCTCCCAAGCTGCCTACGACCGGAGCGTCCGAGACGTCTTCCGGG
GCCTGGAGAGCGTGGAAGCGATCTTGACGGACCAGCGATTTTTGGCGGGA
GATGTCCTCACGGAAGCCGatGTCCGCTTGTTCCCCACCGTTATCAGGTT
TGACGCGGTGTATGCATCCCTATTCAAATGTGCCGGGAAGCGAATTGCGG
ACTACCCGAATTTGACGCAGTGGATGAGGGAGGTATATCAAATCCCAGGG
GTGCGGACCACGGTAGATATACCAGCGCTGATACGAAGCTATTTCGTCCA
GctcttccccctgAATCCCTCAGGAATTTGCCCCCAAGGCCCCACAGAAG
AAGACCTTAAAGTTTTGGAAAGACACGATAGGGAGGAGCGCTTTGTgaaa
gcagggggaggaggtagcaTATTTGCTAccaagggagaagaagacaggga
gggaggaaccgaAGGTACTTAA back to top
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