EWM28848.1, cds1831 (CDS) Nannochloropsis gaditana

Overview
NameEWM28848.1
Unique Namecds1831
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002458.1:260841..261028 +
Alignment locationCM002458.1:261283..261649 +
Alignment locationCM002458.1:262009..262407 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM28848.1
Productcysteine proteinase
Orig transcript idgnl|cribi|Naga_100402g1.3863.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002458.1supercontigCM002458.1:260841..261028 +
CM002458.1supercontigCM002458.1:261283..261649 +
CM002458.1supercontigCM002458.1:262009..262407 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
GO:0008234cysteine-type peptidase activity
Vocabulary: Biological Process
TermDefinition
GO:0019538protein metabolic process
GO:0006508proteolysis
Vocabulary: INTERPRO
TermDefinition
IPR000169Pept_cys_AS
IPR013128Peptidase_C1A
IPR013201Prot_inhib_I29
IPR000668Peptidase_C1A_C
Homology
BLAST of EWM28848.1 vs. NCBI_GenBank
Match: gi|585111273|gb|EWM28848.1| (cysteine proteinase [Nannochloropsis gaditana])

HSP 1 Score: 652.129 bits (1681), Expect = 0.000e+0
Identity = 317/317 (100.00%), Postives = 317/317 (100.00%), Query Frame = 0
Query:    1 MMPSRLKVMITVLLFVTITVTSSVAESDPAPAHDQVRKHKRHRRGWVLLGHETAAEEWSRFKRYFRKVYHSPSEEEHRFHVFASSLAEARVRNAQNVAAGGEHVFGVTRFSDETPEEFNRRYKGRKGHGRGVVSGAEVRRPLAYTSALMGREGQEGGSVEVSRPPQVDWVAAGATTSIGNQGQCGSCWAFSATSQIESAFILAGHAPWRLSVQQVTSCTSGGFGCGGGDTIQAYEQLLGMETKTGMPIPGLVAAAMAPYQQSMYQECLSPLCTERCRLRQIGNLSVAAEMEALTGEGAGALGTQGSARTRGREFFFF 317
            MMPSRLKVMITVLLFVTITVTSSVAESDPAPAHDQVRKHKRHRRGWVLLGHETAAEEWSRFKRYFRKVYHSPSEEEHRFHVFASSLAEARVRNAQNVAAGGEHVFGVTRFSDETPEEFNRRYKGRKGHGRGVVSGAEVRRPLAYTSALMGREGQEGGSVEVSRPPQVDWVAAGATTSIGNQGQCGSCWAFSATSQIESAFILAGHAPWRLSVQQVTSCTSGGFGCGGGDTIQAYEQLLGMETKTGMPIPGLVAAAMAPYQQSMYQECLSPLCTERCRLRQIGNLSVAAEMEALTGEGAGALGTQGSARTRGREFFFF
Sbjct:    1 MMPSRLKVMITVLLFVTITVTSSVAESDPAPAHDQVRKHKRHRRGWVLLGHETAAEEWSRFKRYFRKVYHSPSEEEHRFHVFASSLAEARVRNAQNVAAGGEHVFGVTRFSDETPEEFNRRYKGRKGHGRGVVSGAEVRRPLAYTSALMGREGQEGGSVEVSRPPQVDWVAAGATTSIGNQGQCGSCWAFSATSQIESAFILAGHAPWRLSVQQVTSCTSGGFGCGGGDTIQAYEQLLGMETKTGMPIPGLVAAAMAPYQQSMYQECLSPLCTERCRLRQIGNLSVAAEMEALTGEGAGALGTQGSARTRGREFFFF 317          
BLAST of EWM28848.1 vs. NCBI_GenBank
Match: gi|162335|gb|AAA30270.1| (cysteine proteinase, partial [Trypanosoma cruzi])

HSP 1 Score: 115.161 bits (287), Expect = 3.994e-27
Identity = 74/191 (38.74%), Postives = 95/191 (49.74%), Query Frame = 0
Query:   48 LLGHETAAEEWSRFKRYFRKVYHSPSEEEHRFHVFASSLAEARVRNAQNVAAGGEHVFGVTRFSDETPEEFNRRYKGRKGHGRGVVSGAEVRRPLAYTSALMGREGQEGGSVEVSRPPQVDWVAAGATTSIGNQGQCGSCWAFSATSQIESAFILAGHAPWRLSVQQVTSCTSGGFGCGGGDTIQAYEQLL 238
            L   ET A ++  FK+   +VY S +EE  R  VF  +L  AR+  A N  A     FGVT FSD T EEF  RY     H     + A+ R  +     ++G             P  VDW A GA T++ +QGQCGSCWAFSA   +E  + LAGH    LS Q + SC     GCGGG    A+E ++
Sbjct:   28 LHAEETLASQFVEFKQKHGRVYESAAEERFRLSVFRENLFLARLHAAANPHA----TFGVTPFSDLTREEFRSRYHNGAAH----FAAAQERARVPVNVEVVGA------------PAAVDWRARGAVTAVKDQGQCGSCWAFSAIGNVECQWFLAGHPLTNLSEQMLVSCDKTDSGCGGGLMNNAFEWIV 198          
BLAST of EWM28848.1 vs. NCBI_GenBank
Match: gi|1177790656|gb|ORC85814.1| (cysteine peptidase precursor [Trypanosoma theileri])

HSP 1 Score: 115.931 bits (289), Expect = 1.692e-26
Identity = 70/189 (37.04%), Postives = 100/189 (52.91%), Query Frame = 0
Query:   50 GHETAAEEWSRFKRYFRKVYHSPSEEEHRFHVFASSLAEARVRNAQNVAAGGEHVFGVTRFSDETPEEFNRRYKGRKGHGRGVVSGAEVRRPLAYTSALMGREGQEGGSVEVSRPPQVDWVAAGATTSIGNQGQCGSCWAFSATSQIESAFILAGHAPWRLSVQQVTSCTSGGFGCGGGDTIQAYEQLL 238
              +T A +++ FK+ + KVY    EE +R  VF  +LA A +    N  A    +FGVTRFSD T EEF +RY   + + +  ++   +RRP+   +               + P QVDW   GA T + +QG CGSCWAFSA   IES + +AG+   RLS Q + SC +   GC GG    A++ L+
Sbjct:   29 ADDTLASKFAAFKQKYGKVYRDAGEEAYRLRVFKENLAHAELEAKANPHA----MFGVTRFSDLTREEFRQRYINGEAYFK--MAERRLRRPVEVPAG--------------NAPAQVDWRTKGAVTPVKDQGSCGSCWAFSAIGNIESQWHMAGNPLTRLSEQLLVSCDTVDEGCNGGLMDNAFKWLV 197          
BLAST of EWM28848.1 vs. NCBI_GenBank
Match: gi|71660475|ref|XP_821954.1| (cysteine peptidase [Trypanosoma cruzi strain CL Brener] >gi|3063559|gb|AAC14094.1| TcC31.13 [Trypanosoma cruzi] >gi|70887345|gb|EAO00103.1| cysteine peptidase, putative [Trypanosoma cruzi])

HSP 1 Score: 115.931 bits (289), Expect = 1.957e-26
Identity = 74/197 (37.56%), Postives = 98/197 (49.75%), Query Frame = 0
Query:   48 LLGHETAAEEWSRFKRYFRKVYHSPSEEEHRFHVFASSLAEARVRNAQNVAAGGEHVFGVTRFSDETPEEFNRRYKGRKGHGRGVVSGAEVRRPLAYTSALMGREGQEGGSVEVSRPPQVDWVAAGATTSIGNQGQCGSCWAFSATSQIESAFILAGHAPWRLSVQQVTSCTSGGFGCGGGDTIQAYEQLLGMETKT 244
            L   ET A +++ FK+   +VY S +EE  R  VF  +L  AR+  A N  A     FGVT FSD T EEF  RY     H     + A+ R  +     ++G             P   DW   GA T++ NQG CGSCWAF+A   +ES + LAGH   RLS Q + SC    FGCGGG  + A++ ++     T
Sbjct:   61 LHAEETLASQFAEFKQKHGRVYESAAEEAFRLSVFRENLFLARLHAAANPHA----TFGVTPFSDLTREEFRSRYHNGAAH----FAAAQERARVPVDVEVVGA------------PAAKDWRKEGAVTAVKNQGLCGSCWAFAAIGNVESQWFLAGHPLTRLSEQMLVSCDDTNFGCGGGWPLGAFKWIVDRNNGT 237          
BLAST of EWM28848.1 vs. NCBI_GenBank
Match: gi|343472970|emb|CCD15012.1| (unnamed protein product [Trypanosoma congolense IL3000])

HSP 1 Score: 116.701 bits (291), Expect = 2.589e-26
Identity = 67/192 (34.90%), Postives = 97/192 (50.52%), Query Frame = 0
Query:   47 VLLGHETAAEEWSRFKRYFRKVYHSPSEEEHRFHVFASSLAEARVRNAQNVAAGGEHVFGVTRFSDETPEEFNRRYKGRKGHGRGVVSGAEVRRPLAYTSALMGREGQEGGSVEVSRPPQVDWVAAGATTSIGNQGQCGSCWAFSATSQIESAFILAGHAPWRLSVQQVTSCTSGGFGCGGGDTIQAYEQLL 238
            VL   ++  ++++ FK+ + + Y   +EE  RF VF  ++  A+   A N  A     FGVTRFSD +PEEF   Y     H       A ++RP    +   G+            PP +DW   GA T + +QGQC S WAFSA   IE  + +AGH    LS Q + SC +  FGCGGG +  A++ ++
Sbjct:   30 VLHAEQSLQQQFAAFKQKYSRSYRDATEEAFRFRVFKQNMERAKEEAAANPYA----TFGVTRFSDMSPEEFRATY-----HNGAEYYAAALKRPRKVVNVSTGKA-----------PPAIDWRKKGAVTPVKDQGQCDSSWAFSAIGNIEGQWKVAGHELTSLSEQMLVSCDTNDFGCGGGFSDPAFKWIV 201          
BLAST of EWM28848.1 vs. NCBI_GenBank
Match: gi|343477445|emb|CCD11724.1| (unnamed protein product, partial [Trypanosoma congolense IL3000])

HSP 1 Score: 116.316 bits (290), Expect = 4.352e-26
Identity = 68/192 (35.42%), Postives = 96/192 (50.00%), Query Frame = 0
Query:   47 VLLGHETAAEEWSRFKRYFRKVYHSPSEEEHRFHVFASSLAEARVRNAQNVAAGGEHVFGVTRFSDETPEEFNRRYKGRKGHGRGVVSGAEVRRPLAYTSALMGREGQEGGSVEVSRPPQVDWVAAGATTSIGNQGQCGSCWAFSATSQIESAFILAGHAPWRLSVQQVTSCTSGGFGCGGGDTIQAYEQLL 238
            VL   ++  ++++ FK+ + + Y   +EE  RF VF  ++  A+   A N  A     FGVTRFSD +PEEF   Y     H       A ++RP    +   G+            P  VDW   GA T + +QGQCGSCWAFSA   IE  + +AGH    LS Q + SC +  FGC GG    A++ ++
Sbjct:   30 VLHAEQSLQQQFAAFKQKYSRSYKDATEEAFRFRVFKQNMERAKEEAAANPYA----TFGVTRFSDMSPEEFRATY-----HNGAEYYAAALKRPRKVVNVSTGKA-----------PEAVDWRKKGAVTPVKDQGQCGSCWAFSAIGNIEGQWKVAGHELTSLSEQMLVSCDTNDFGCEGGLMDDAFKWIV 201          
BLAST of EWM28848.1 vs. NCBI_GenBank
Match: gi|1136312|gb|AAB41118.1| (cruzipain [Trypanosoma cruzi])

HSP 1 Score: 115.161 bits (287), Expect = 9.157e-26
Identity = 74/191 (38.74%), Postives = 97/191 (50.79%), Query Frame = 0
Query:   48 LLGHETAAEEWSRFKRYFRKVYHSPSEEEHRFHVFASSLAEARVRNAQNVAAGGEHVFGVTRFSDETPEEFNRRYKGRKGHGRGVVSGAEVRRPLAYTSALMGREGQEGGSVEVSRPPQVDWVAAGATTSIGNQGQCGSCWAFSATSQIESAFILAGHAPWRLSVQQVTSCTSGGFGCGGGDTIQAYEQLL 238
            L   ET A +++ FK+   +VY S +EE  R  VF ++L  AR+  A N  A     FGVT FSD T EEF  RY     H     + A+ R  +     ++G             P  VDW A GA T++ +QGQCGSCWAFSA   +E  + LAGH    LS Q + SC     GCGGG    A+E ++
Sbjct:   28 LHAEETLASQFAEFKQKHGRVYGSAAEEAFRLSVFRANLFLARLHAAANPHA----TFGVTAFSDLTREEFRSRYHNGAAH----FAAAQERARVPVNVEVVGA------------PAAVDWRARGAVTAVKDQGQCGSCWAFSAIGNVECQWFLAGHPLTNLSEQMLVSCDKTDSGCGGGLMNNAFEWIV 198          
BLAST of EWM28848.1 vs. NCBI_GenBank
Match: gi|408009|gb|AAA18215.1| (cysteine protease precursor [Trypanosoma congolense])

HSP 1 Score: 116.316 bits (290), Expect = 9.173e-26
Identity = 68/192 (35.42%), Postives = 96/192 (50.00%), Query Frame = 0
Query:   47 VLLGHETAAEEWSRFKRYFRKVYHSPSEEEHRFHVFASSLAEARVRNAQNVAAGGEHVFGVTRFSDETPEEFNRRYKGRKGHGRGVVSGAEVRRPLAYTSALMGREGQEGGSVEVSRPPQVDWVAAGATTSIGNQGQCGSCWAFSATSQIESAFILAGHAPWRLSVQQVTSCTSGGFGCGGGDTIQAYEQLL 238
            VL   ++  ++++ FK+ + + Y   +EE  RF VF  ++  A+   A N  A     FGVTRFSD +PEEF   Y     H       A ++RP    +   G+            P  VDW   GA T + +QGQCGSCWAFSA   IE  + +AGH    LS Q + SC +  FGC GG    A++ ++
Sbjct:   30 VLHAEQSLQQQFAAFKQKYSRSYKDATEEAFRFRVFKQNMERAKEEAAANPYA----TFGVTRFSDMSPEEFRATY-----HNGAEYYAAALKRPRKVVNVSTGKA-----------PEAVDWRKKGAVTPVKDQGQCGSCWAFSAIGNIEGQWKVAGHELTSLSEQMLVSCDTNDFGCEGGLMDDAFKWIV 201          
BLAST of EWM28848.1 vs. NCBI_GenBank
Match: gi|4581057|gb|AAD24589.1|AF139913_1 (cysteine protease, partial [Trypanosoma congolense])

HSP 1 Score: 115.546 bits (288), Expect = 1.616e-25
Identity = 67/192 (34.90%), Postives = 97/192 (50.52%), Query Frame = 0
Query:   47 VLLGHETAAEEWSRFKRYFRKVYHSPSEEEHRFHVFASSLAEARVRNAQNVAAGGEHVFGVTRFSDETPEEFNRRYKGRKGHGRGVVSGAEVRRPLAYTSALMGREGQEGGSVEVSRPPQVDWVAAGATTSIGNQGQCGSCWAFSATSQIESAFILAGHAPWRLSVQQVTSCTSGGFGCGGGDTIQAYEQLL 238
            VL   ++  ++++ FK+ + + Y   +EE  RF VF  ++  A+   A N  A     FGVTRFSD +PEEF   Y     H       A ++RP    +   G+            PP +DW   GA T + +QGQC S WAFSA   IE  + +AGH    LS Q + SC +  FGCGGG +  A++ ++
Sbjct:   30 VLHAEQSLQQQFAAFKQKYSRSYKDATEEAFRFRVFKQNMERAKEEAAANPYA----TFGVTRFSDMSPEEFRATY-----HNGAEYYAAALKRPRKVVNVSTGKA-----------PPAIDWRKKGAVTPVKDQGQCHSSWAFSAIGNIEGQWKIAGHELTSLSEQMLVSCDTNDFGCGGGFSDPAFKWIV 201          
BLAST of EWM28848.1 vs. NCBI_GenBank
Match: gi|71666430|ref|XP_820174.1| (cysteine peptidase [Trypanosoma cruzi strain CL Brener] >gi|70885508|gb|EAN98323.1| cysteine peptidase, putative [Trypanosoma cruzi])

HSP 1 Score: 115.546 bits (288), Expect = 1.941e-25
Identity = 74/191 (38.74%), Postives = 96/191 (50.26%), Query Frame = 0
Query:   48 LLGHETAAEEWSRFKRYFRKVYHSPSEEEHRFHVFASSLAEARVRNAQNVAAGGEHVFGVTRFSDETPEEFNRRYKGRKGHGRGVVSGAEVRRPLAYTSALMGREGQEGGSVEVSRPPQVDWVAAGATTSIGNQGQCGSCWAFSATSQIESAFILAGHAPWRLSVQQVTSCTSGGFGCGGGDTIQAYEQLL 238
            L   ET A +++ FK+   +VY S +EE  R  VF  +L  AR+  A N  A     FGVT FSD T EEF  RY     H     + A+ R  +     ++G             P  VDW A GA T++ +QGQCGSCWAFSA   +E  + LAGH    LS Q + SC     GCGGG    A+E ++
Sbjct:   28 LHAEETLASQFAEFKQKHGRVYESAAEEAFRLSVFRENLFLARLHAAANPHA----TFGVTPFSDLTREEFRSRYHNGAAH----FAAAQERARVPVNVEVVGA------------PAAVDWRARGAVTAVKDQGQCGSCWAFSAIGNVECQWFLAGHPLTNLSEQMLVSCDKTDSGCGGGLMNNAFEWIV 198          
The following BLAST results are available for this feature:
BLAST of EWM28848.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585111273|gb|EWM28848.1|0.000e+0100.00cysteine proteinase [Nannochloropsis gaditana][more]
gi|162335|gb|AAA30270.1|3.994e-2738.74cysteine proteinase, partial [Trypanosoma cruzi][more]
gi|1177790656|gb|ORC85814.1|1.692e-2637.04cysteine peptidase precursor [Trypanosoma theileri... [more]
gi|71660475|ref|XP_821954.1|1.957e-2637.56cysteine peptidase [Trypanosoma cruzi strain CL Br... [more]
gi|343472970|emb|CCD15012.1|2.589e-2634.90unnamed protein product [Trypanosoma congolense IL... [more]
gi|343477445|emb|CCD11724.1|4.352e-2635.42unnamed protein product, partial [Trypanosoma cong... [more]
gi|1136312|gb|AAB41118.1|9.157e-2638.74cruzipain [Trypanosoma cruzi][more]
gi|408009|gb|AAA18215.1|9.173e-2635.42cysteine protease precursor [Trypanosoma congolens... [more]
gi|4581057|gb|AAD24589.1|AF139913_11.616e-2534.90cysteine protease, partial [Trypanosoma congolense... [more]
gi|71666430|ref|XP_820174.1|1.941e-2538.74cysteine peptidase [Trypanosoma cruzi strain CL Br... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna1835rna1835Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications