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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100095g15.10173.mrna |
| Orig protein id | gnl|cribi|Naga_100095g15.10173 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002458.1 | supercontig | CM002458.1:201192..203666 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna1806 ID=rna1806|Name=rna1806|organism=Nannochloropsis gaditana|type=mRNA|length=1991bp
ACAGGGTTTCTAAACACCACCCATGAGCCATAAAAATCGCACTGGAAAAG
ACTGCGATCACAAAGACGGTTTAGATTCGCTGTTGGAGGAGTGCGCAGTC
TTCGTAGCGCCCCATCCTTCATCAGACGAAAAGATGGCTCCCGATTCGAA
CTGCATGAATGTTACAGAGGAAGACGAATGGGATGATTGGGAGACTACAA
AGGAGCCAATCCTAAGCAGTACGAGTGACTGTTCTTCCAGCCCACTTCAA
CCGACGCTTGATGAGGCTCGTGTTAAGTTTTTCCAAGGGCAGCTTCAGAA
ATACATCCAAGACTTGGCAGATCCTTACATCTTGCAGGAGATCGAAAGCG
ACTTGGCCAAAAAGCATTACAAAGATTTCATTGAGTACTTCACCGATAAA
CCCCACATGGCTCAATACACATTGGATCACGAGCTTACACGTATGTCGTA
TAAGCTCGTGAGGAGCTCTGGGGCCCCTGACCGTCACCACACGTATCAGG
ATGACATGATTGTGGAGTCATATCAGAGGAACTCGAGGAAAGACTCGAAT
TATCAACATGGTCCAGTGGACTTTTCCGTATCGAATCCGACCGAGGGCAA
CGAGTTTCCGGTGCCAAAATTATATGTACTTGCTGAAGATGATCCAGCAT
CTATTAGGGCTATTCATGCGATATGCGCTCAAAATCTCACGTGGCGCTTC
GCGAATCAAATTTTGTTCGCGGATATGCTCGAAACAATACAGCGTCGCTT
CTTCCGTGCCGACTTGGAGGTCGGGGTGGTAAGCAGGGACTCAAAGTTCG
TGGTAGACGTGGATGCTGATAGCGTGGAGGGTACCGCTATTTTCCATATC
TCCCTCGCAGGGGGGACAGATGGACCTGTGGAGGTGGCAAGACTTCAGGG
GCGAATAAAAGTAGAAGTTAAAAAACAATGTTTGGTCCAGTGCGTGAAAC
TGATGCGTCTGTTGCCCGTTTTTGACGATACACTGGCCAGGGTCGCCTCT
GCGTTGGTCAAGCATGAGCATGGAGCACAGGAGGGAAGAGAAGGGGAAGA
GGGAGGATGGGGGTGGAAGACGACATCGCATTTCCCACTCACAACCTTGA
AAAAGGAAATGCTGGCGGCAGGCGAAGGTCTGATGCAAGCAGTTACCACT
GTAGGGAAAGTGCTCGAAGAGGTGGCTGCTGAAGCCGCCTTGGATGAGCG
GCTTCAGCAAGGAAAGGGGCCAGAAAGCCCGGAGGAAAGTTGCTCGATTG
AGGAGGAGCTTAAAGGGAGTACAGATGATCCACGAAGAGGATGCACCTTT
GCTAGGGGAAGCGAGAAAGGCGGTGGCATCGTGCATGTTGCCCGTGACAA
GAGAGAAAAAGGACGGGAAGGAGGGCAGGAAGGAGGAAGGGGGCCAACAG
GAGCCCTGGGGTGGCTTCAGGCTTCTGAAAGCATGCTGGAAGGCGTGGTG
GGCGGCCTCGGCTCTTTGATAGGGGCCAGTGGCAGCCAAAGCGGGTTTGG
GTTCCATCTACCTCGTGGGGCGCGAGTCCCCCCTTCGCCCTTTTCATCAA
AATGGGTGGGGGCTGGATCCGGCGGGAATGGAGAGGAAGAGCTGGAACGT
GTGCAGTTATACCGCCGGGAAGGGGAAGGTGAAAGGGAGAAAGGGACCGA
AGTGGGGGGAATGGACGCATGCGAAGCTTGAAGACAGGGGGAAGGGAGGG
CAGGAGAAAAGGGAGGGAAAACGAGGACACATTTGTATTATTCGAGGCCG
TGCGGACACGCAATGCCTGCACAGCCGCTTTAAATCATCCCCAGTGCTCG
TCATGGGGTGTGGCACTACATGGTAGACGTAAAGTTGGACTCAATAGTGG
AAGCCAGCTGCGGCGTGGCTTCAAATTTCTTGAGCAAGTACCTTGTAATT
TATAATGACTTTGTTGTAATCTATGGAATACTCATTAAAGGACCTGTCGC
CTGGCGGTCACAGTAAACCATCCAAAGCAAGAAAAGAAATC back to topprotein sequence of rna1806 >rna1806-protein ID=rna1806-protein|Name=rna1806|organism=Nannochloropsis gaditana|type=polypeptide|length=400bp
MGDRIRKAICGPGYCFASLVCAKTGKKYATPIATSRLHRCFGSHAGIPNT
KVGGSSLPTSPSSFSSSTAVSPLADPPTTFGDHRRLYPLPYKRCSPASLP
LNVQHSDRFLVSRRGQALYMQTFRPPHLKEEGVKGVVFLVHDYGDHSSWF
LRDLAVALCQQEFLVVSLDLEGHGRSDGLRGRFDFGHAVIDLCDQYGAFS
LEQQSTPCFLLGEGLGAALAYKTYQMQGGRFWDGIILLSPTLAFPPRLRP
SPWMLRLLRRLEPRMGDLPLIPWGRQYLDLLSDSVARQEVMENPFFIQHG
MRVATIFQVLAALDELYLHPPPSFTPASLGPSPPSSGVPPRTSPPSPAVC
TFNEMTAPFLILQGEEDRFHGGRERGGEGGGGRGWWCGNCTDRRRAWTRR back to topmRNA from alignment at CM002458.1:201192..203666- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna1806 ID=rna1806|Name=rna1806|organism=Nannochloropsis gaditana|type=mRNA|length=2475bp|location=Sequence derived from alignment at CM002458.1:201192..203666- (Nannochloropsis gaditana)
GCACAGCCTGTACAGGTGCCCATCGTCCCACACGCCACGTTCACGGAGCC
GCCGCGCGTTGTTTCCTTGCCCATGGAGGAGGGGTCGGTTTTTGTGTGCA
GGTGCAGCAGATATGGATCAAAATCTAGCCAAGACACACCGGGGCTTAGC
GACGGCTTCCTTCTATGGGATAGCCCAGATCCGCTGAGTTTAAAAGCCGC
TTTTAAACCCCCTTTTCCCACGATGCACCCATCCGAACGCTGGTGCATGA
TCATGGTGCCGTTTTCAATGCCCTCGTGGTCTCAGATCGCGCCTTGCTTG
TTTCCTCGGGTGGATCTACACTCGTGACCAAGTCACTGGCATGGTCTAGG
CTTCAACCCTCGAATTTTTCCCCGACGGCGGCGACGGCCGAGGTGCGGGG
ACATGCGGGACGTGTTTTTCACAAATTACGGGCTTTTTCCACCCTTGTTT
TGGCTGCCTTGACCAGTTTCTTCTTTTCAATATCCACAGGGGAAAGGAGA
AGTGTGCCTGACTAGAAAGTACTATTTTTATGGGCGACAGGATTAGGAAA
GCAATCTGCGGACCAGGATACTGCTTTGCATCTCTCGTCTGTGCGAAAAC
GGGAAAGAAATATGCCACCCCCATCGCAACGTCGCGTTTACACCGGTGCT
TTGGCTCCCATGCTGGTATTCCAAACACAAAGGTAGGGGGCTCTTCGCTT
CCTACTTCTCCTTCCTCCTTCTCGTCCTCCACCGCGGTTTCCCCCCTGGC
TGACCCTCCCACTACATTCGGGGACCATCGCCGCCTGTACCCGCTGCCCT
ATAAACGATGCTCTCCTGCCTCTCTCCCGCTCAACGTTCAACACTCGGAT
CGTTTTCTGGTCTCACGACGCGGGCAGGCTCTTTACATGCAAACTTTTCG
CCCCCCGCATCTAAAAGAGGAAGGCGTGAAGGGCGTTGTGTTTCTCGTCC
ATGATTACGGTGATCACTCGTCCTGGTTCCTAAGGGACCTGGCCGTGGCA
CTCTGCCAACAGGTAAAATAGAGCGGTGCATCAAGCACGACGGCTTCGGA
GGGAAGAGGGCGGGGGAAGAGGGCGGGGGCGTTTCGAAGAAAGGTAACTG
AGTGAAGCGATGCATGGCCGCCCTTCCAATAGTCTTTCTTGCGTCCCTCC
TCTCCCATCAATCTCCTTTCAGGAGTTTCTGGTTGTCTCTCTGGACCTGG
AAGGACATGGACGTAGCGATGGCCTGCGAGGGCGGTTCGATTTTGGGCAC
GCCGTCATCGATTTGTGCGACCAGTACGGAGCGTTCTCCCTGGAGCAACA
AAGCACGCCGTGCTTCCTGCTGGGTGAAGGCTTGGGGGCTGCCCTGGCCT
ACAAGACGTATCAGATGCAAGGGGGAAGGTTCTGGGACGGGATCATCCTC
CTCTCTCCCACCCTGGCCTTCCCCCCCCGCCTGCGTCCATCGCCCTGGAT
GCTCAGGTGAGGGGTTGGGCAAGAAAAAAGGGTCAGGAGCATCGAGGAGG
CGGTGGGGCGTCCCGGTGCCTCACTTCTCCCTCTTTCCTTCCCTCCCTCT
TTCCCTCCCTCCCTCCCTTTCTCTTTCCAGGCTTCTCCGTCGGCTCGAAC
CTCGTATGGGCGACCTCCCCCTGATCCCCTGGGGTCGGCAGTACCTGGAC
CTGCTATCCGACTCTGTCGCACGCCAGGAGGTGATGGAGAACCCTTTCTT
TATCCAGCATGGCATGCGCGTTGCTACCATCTTTCAGGTCCTGGCGGCCT
TGGACGAGCTCTACCTTCACCCGCCCCCGTCCTTTACCCCTGCCTCGCTC
GGTCCCTCGCCGCCTTCCTCTGGGGTCCCTCCACGGACATCCCCCCCGTC
GCCTGCAGTGTGTACATTCAACGAGATGACCGCTCCTTTCCTGATTTTGC
AAGGGGAAGAGGACCGCTTTCATGGTGGGAGGGAGAGGGGAGGGGAAGGC
GGGGGGGGGCGGGGGTGGTGGTGCGGGAATTGCACCGACAGGCGAAGAGC
TTGGACAAGACGCTAAAATTCCTCCCCGGCCTGTCACATTGCCTTCTTGG
GGAAGGAAGGGGAGAAGGAGGGAGGGAAAGAGGCTTGCAGCAGGTTTCTA
TGGAGGTGGTGGGGTGGTTGAATGCGCGGTGTTCAAAGATTGTGGGCGGG
GGACAGGGCGGGACGGTAGGGGGAGGCGAGGGAGGGAGTGACGGAGGGGA
AATGGAAGAAGAAGACTCCTTGGAGCTTGTGCATAGACCGTAGAGGGATG
AGTGTGGAGAGAAAGAGATGTTGGGAGGAGGAAAGGGGTGATATGATCAT
GCCCGACAGGGGCTACAAACCGCGGAGGACGATGGCCTTCTCGATTCCGT
GTGATCGATTTCTTTTCTTGCTTTGGATGGTTTACTGTGACCGCCAGGCG
ACAGGTCCTTTAATGAGTATTCCATAGATTACAACAAAGTCATTATAAAT
TACAAGGTACTTGCTCAAGAAATTT back to topCoding sequence (CDS) from alignment at CM002458.1:201192..203666- >rna1806 ID=rna1806|Name=rna1806|organism=Nannochloropsis gaditana|type=CDS|length=3609bp|location=Sequence derived from alignment at CM002458.1:201192..203666- (Nannochloropsis gaditana)
GCTTCTCCGTCGGCTCGAACCTCGTATGGGCGACCTCCCCCTGATCCCCT
GGGGTCGGCAGTACCTGGACCTGCTATCCGACTCTGTCGCACGCCAGGAG
GTGATGGAGAACCCTTTCTTTATCCAGCATGGCATGCGCGTTGCTACCAT
CTTTCAGGTCCTGGCGGCCTTGGACGAGCTCTACCTTCACCCGCCCCCGT
CCTTTACCCCTGCCTCGCTCGGTCCCTCGCCGCCTTCCTCTGGGGTCCCT
CCACGGACATCCCCCCCGTCGCCTGCAGTGTGTACATTCAACGAGATGAC
CGCTCCTTTCCTGATTTTGCAAGGGGAAGAGGACCGCTTTCATGGTGGGA
GGGAGAGGGGAGGGGAAGGCGGGGGGGGGCGGGGGTGGTGGTGCGGGAAT
TGCACCGACAGGCGAAGAGCTTGGACAAGACGCTAAGAGTTTCTGGTTGT
CTCTCTGGACCTGGAAGGACATGGACGTAGCGATGGCCTGCGAGGGCGGT
TCGATTTTGGGCACGCCGTCATCGATTTGTGCGACCAGTACGGAGCGTTC
TCCCTGGAGCAACAAAGCACGCCGTGCTTCCTGCTGGGTGAAGGCTTGGG
GGCTGCCCTGGCCTACAAGACGTATCAGATGCAAGGGGGAAGGTTCTGGG
ACGGGATCATCCTCCTCTCTCCCACCCTGGCCTTCCCCCCCCGCCTGCGT
CCATCGCCCTGGATGCTCAGATGGGCGACAGGATTAGGAAAGCAATCTGC
GGACCAGGATACTGCTTTGCATCTCTCGTCTGTGCGAAAACGGGAAAGAA
ATATGCCACCCCCATCGCAACGTCGCGTTTACACCGGTGCTTTGGCTCCC
ATGCTGGTATTCCAAACACAAAGGTAGGGGGCTCTTCGCTTCCTACTTCT
CCTTCCTCCTTCTCGTCCTCCACCGCGGTTTCCCCCCTGGCTGACCCTCC
CACTACATTCGGGGACCATCGCCGCCTGTACCCGCTGCCCTATAAACGAT
GCTCTCCTGCCTCTCTCCCGCTCAACGTTCAACACTCGGATCGTTTTCTG
GTCTCACGACGCGGGCAGGCTCTTTACATGCAAACTTTTCGCCCCCCGCA
TCTAAAAGAGGAAGGCGTGAAGGGCGTTGTGTTTCTCGTCCATGATTACG
GTGATCACTCGTCCTGGTTCCTAAGGGACCTGGCCGTGGCACTCTGCCAA
CAGGCTTCTCCGTCGGCTCGAACCTCGTATGGGCGACCTCCCCCTGATCC
CCTGGGGTCGGCAGTACCTGGACCTGCTATCCGACTCTGTCGCACGCCAG
GAGGTGATGGAGAACCCTTTCTTTATCCAGCATGGCATGCGCGTTGCTAC
CATCTTTCAGGTCCTGGCGGCCTTGGACGAGCTCTACCTTCACCCGCCCC
CGTCCTTTACCCCTGCCTCGCTCGGTCCCTCGCCGCCTTCCTCTGGGGTC
CCTCCACGGACATCCCCCCCGTCGCCTGCAGTGTGTACATTCAACGAGAT
GACCGCTCCTTTCCTGATTTTGCAAGGGGAAGAGGACCGCTTTCATGGTG
GGAGGGAGAGGGGAGGGGAAGGCGGGGGGGGGCGGGGGTGGTGGTGCGGG
AATTGCACCGACAGGCGAAGAGCTTGGACAAGACGCTAAGAGTTTCTGGT
TGTCTCTCTGGACCTGGAAGGACATGGACGTAGCGATGGCCTGCGAGGGC
GGTTCGATTTTGGGCACGCCGTCATCGATTTGTGCGACCAGTACGGAGCG
TTCTCCCTGGAGCAACAAAGCACGCCGTGCTTCCTGCTGGGTGAAGGCTT
GGGGGCTGCCCTGGCCTACAAGACGTATCAGATGCAAGGGGGAAGGTTCT
GGGACGGGATCATCCTCCTCTCTCCCACCCTGGCCTTCCCCCCCCGCCTG
CGTCCATCGCCCTGGATGCTCAGATGGGCGACAGGATTAGGAAAGCAATC
TGCGGACCAGGATACTGCTTTGCATCTCTCGTCTGTGCGAAAACGGGAAA
GAAATATGCCACCCCCATCGCAACGTCGCGTTTACACCGGTGCTTTGGCT
CCCATGCTGGTATTCCAAACACAAAGGTAGGGGGCTCTTCGCTTCCTACT
TCTCCTTCCTCCTTCTCGTCCTCCACCGCGGTTTCCCCCCTGGCTGACCC
TCCCACTACATTCGGGGACCATCGCCGCCTGTACCCGCTGCCCTATAAAC
GATGCTCTCCTGCCTCTCTCCCGCTCAACGTTCAACACTCGGATCGTTTT
CTGGTCTCACGACGCGGGCAGGCTCTTTACATGCAAACTTTTCGCCCCCC
GCATCTAAAAGAGGAAGGCGTGAAGGGCGTTGTGTTTCTCGTCCATGATT
ACGGTGATCACTCGTCCTGGTTCCTAAGGGACCTGGCCGTGGCACTCTGC
CAACAGGCTTCTCCGTCGGCTCGAACCTCGTATGGGCGACCTCCCCCTGA
TCCCCTGGGGTCGGCAGTACCTGGACCTGCTATCCGACTCTGTCGCACGC
CAGGAGGTGATGGAGAACCCTTTCTTTATCCAGCATGGCATGCGCGTTGC
TACCATCTTTCAGGTCCTGGCGGCCTTGGACGAGCTCTACCTTCACCCGC
CCCCGTCCTTTACCCCTGCCTCGCTCGGTCCCTCGCCGCCTTCCTCTGGG
GTCCCTCCACGGACATCCCCCCCGTCGCCTGCAGTGTGTACATTCAACGA
GATGACCGCTCCTTTCCTGATTTTGCAAGGGGAAGAGGACCGCTTTCATG
GTGGGAGGGAGAGGGGAGGGGAAGGCGGGGGGGGGCGGGGGTGGTGGTGC
GGGAATTGCACCGACAGGCGAAGAGCTTGGACAAGACGCTAAGAGTTTCT
GGTTGTCTCTCTGGACCTGGAAGGACATGGACGTAGCGATGGCCTGCGAG
GGCGGTTCGATTTTGGGCACGCCGTCATCGATTTGTGCGACCAGTACGGA
GCGTTCTCCCTGGAGCAACAAAGCACGCCGTGCTTCCTGCTGGGTGAAGG
CTTGGGGGCTGCCCTGGCCTACAAGACGTATCAGATGCAAGGGGGAAGGT
TCTGGGACGGGATCATCCTCCTCTCTCCCACCCTGGCCTTCCCCCCCCGC
CTGCGTCCATCGCCCTGGATGCTCAGATGGGCGACAGGATTAGGAAAGCA
ATCTGCGGACCAGGATACTGCTTTGCATCTCTCGTCTGTGCGAAAACGGG
AAAGAAATATGCCACCCCCATCGCAACGTCGCGTTTACACCGGTGCTTTG
GCTCCCATGCTGGTATTCCAAACACAAAGGTAGGGGGCTCTTCGCTTCCT
ACTTCTCCTTCCTCCTTCTCGTCCTCCACCGCGGTTTCCCCCCTGGCTGA
CCCTCCCACTACATTCGGGGACCATCGCCGCCTGTACCCGCTGCCCTATA
AACGATGCTCTCCTGCCTCTCTCCCGCTCAACGTTCAACACTCGGATCGT
TTTCTGGTCTCACGACGCGGGCAGGCTCTTTACATGCAAACTTTTCGCCC
CCCGCATCTAAAAGAGGAAGGCGTGAAGGGCGTTGTGTTTCTCGTCCATG
ATTACGGTGATCACTCGTCCTGGTTCCTAAGGGACCTGGCCGTGGCACTC
TGCCAACAG back to top
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