EWM28900.1, cds1775 (CDS) Nannochloropsis gaditana
|
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM28900.1 vs. NCBI_GenBank
Match: gi|585111341|gb|EWM28900.1| (hypothetical protein Naga_100822g1 [Nannochloropsis gaditana]) HSP 1 Score: 828.165 bits (2138), Expect = 0.000e+0 Identity = 412/412 (100.00%), Postives = 412/412 (100.00%), Query Frame = 0
Query: 1 MASPASLIPNQASGSSRNDAVRGDWVNACSHIKAECDHDEIRGRHGGHAASLLSLPTHQAFPASALPPESTPKKALREEGNNNAKVRDEDAMIKREGTHSCEGSSGAGSGGNEIGDGTSSSAVGLSSEAEGRGPESDVEALKALAASRVATGGKWRRGKWTPEEEVYVNRVTEAFHQGLLPLAAGTTLRSYLADKLNCDPMRITKKFSGVGSIGKCIFHPCMPPQPLKMAEAMVELDRLEAIWRRRLEEIRAVEYEFQQSASLSSQGSATSPSFPPSLGPSLPPSFYQQHYPPQQYPQHHPPYPYHPQHHPHGPHPPATGVPPSSYPDSCGAWQGPPSLPRAPPLPPSSLPSEPTSSSVLSLPPGLPSGAPAPGSRPSQRVVAVGALCIISIPPPFLSPSLNVPRRWPPLSS 412
MASPASLIPNQASGSSRNDAVRGDWVNACSHIKAECDHDEIRGRHGGHAASLLSLPTHQAFPASALPPESTPKKALREEGNNNAKVRDEDAMIKREGTHSCEGSSGAGSGGNEIGDGTSSSAVGLSSEAEGRGPESDVEALKALAASRVATGGKWRRGKWTPEEEVYVNRVTEAFHQGLLPLAAGTTLRSYLADKLNCDPMRITKKFSGVGSIGKCIFHPCMPPQPLKMAEAMVELDRLEAIWRRRLEEIRAVEYEFQQSASLSSQGSATSPSFPPSLGPSLPPSFYQQHYPPQQYPQHHPPYPYHPQHHPHGPHPPATGVPPSSYPDSCGAWQGPPSLPRAPPLPPSSLPSEPTSSSVLSLPPGLPSGAPAPGSRPSQRVVAVGALCIISIPPPFLSPSLNVPRRWPPLSS
Sbjct: 1 MASPASLIPNQASGSSRNDAVRGDWVNACSHIKAECDHDEIRGRHGGHAASLLSLPTHQAFPASALPPESTPKKALREEGNNNAKVRDEDAMIKREGTHSCEGSSGAGSGGNEIGDGTSSSAVGLSSEAEGRGPESDVEALKALAASRVATGGKWRRGKWTPEEEVYVNRVTEAFHQGLLPLAAGTTLRSYLADKLNCDPMRITKKFSGVGSIGKCIFHPCMPPQPLKMAEAMVELDRLEAIWRRRLEEIRAVEYEFQQSASLSSQGSATSPSFPPSLGPSLPPSFYQQHYPPQQYPQHHPPYPYHPQHHPHGPHPPATGVPPSSYPDSCGAWQGPPSLPRAPPLPPSSLPSEPTSSSVLSLPPGLPSGAPAPGSRPSQRVVAVGALCIISIPPPFLSPSLNVPRRWPPLSS 412
BLAST of EWM28900.1 vs. NCBI_GenBank
Match: gi|585111342|gb|EWM28901.1| (hypothetical protein Naga_100822g1 [Nannochloropsis gaditana]) HSP 1 Score: 817.379 bits (2110), Expect = 0.000e+0 Identity = 412/427 (96.49%), Postives = 412/427 (96.49%), Query Frame = 0
Query: 1 MASPASLIPNQASGSSRNDAVRGDWVNACSHIKAECDHDEIRGRHGGHAASLLSLPTHQAFPASALPPESTPKK---------------ALREEGNNNAKVRDEDAMIKREGTHSCEGSSGAGSGGNEIGDGTSSSAVGLSSEAEGRGPESDVEALKALAASRVATGGKWRRGKWTPEEEVYVNRVTEAFHQGLLPLAAGTTLRSYLADKLNCDPMRITKKFSGVGSIGKCIFHPCMPPQPLKMAEAMVELDRLEAIWRRRLEEIRAVEYEFQQSASLSSQGSATSPSFPPSLGPSLPPSFYQQHYPPQQYPQHHPPYPYHPQHHPHGPHPPATGVPPSSYPDSCGAWQGPPSLPRAPPLPPSSLPSEPTSSSVLSLPPGLPSGAPAPGSRPSQRVVAVGALCIISIPPPFLSPSLNVPRRWPPLSS 412
MASPASLIPNQASGSSRNDAVRGDWVNACSHIKAECDHDEIRGRHGGHAASLLSLPTHQAFPASALPPESTPKK ALREEGNNNAKVRDEDAMIKREGTHSCEGSSGAGSGGNEIGDGTSSSAVGLSSEAEGRGPESDVEALKALAASRVATGGKWRRGKWTPEEEVYVNRVTEAFHQGLLPLAAGTTLRSYLADKLNCDPMRITKKFSGVGSIGKCIFHPCMPPQPLKMAEAMVELDRLEAIWRRRLEEIRAVEYEFQQSASLSSQGSATSPSFPPSLGPSLPPSFYQQHYPPQQYPQHHPPYPYHPQHHPHGPHPPATGVPPSSYPDSCGAWQGPPSLPRAPPLPPSSLPSEPTSSSVLSLPPGLPSGAPAPGSRPSQRVVAVGALCIISIPPPFLSPSLNVPRRWPPLSS
Sbjct: 1 MASPASLIPNQASGSSRNDAVRGDWVNACSHIKAECDHDEIRGRHGGHAASLLSLPTHQAFPASALPPESTPKKMRSMLLLPLCPPPQQALREEGNNNAKVRDEDAMIKREGTHSCEGSSGAGSGGNEIGDGTSSSAVGLSSEAEGRGPESDVEALKALAASRVATGGKWRRGKWTPEEEVYVNRVTEAFHQGLLPLAAGTTLRSYLADKLNCDPMRITKKFSGVGSIGKCIFHPCMPPQPLKMAEAMVELDRLEAIWRRRLEEIRAVEYEFQQSASLSSQGSATSPSFPPSLGPSLPPSFYQQHYPPQQYPQHHPPYPYHPQHHPHGPHPPATGVPPSSYPDSCGAWQGPPSLPRAPPLPPSSLPSEPTSSSVLSLPPGLPSGAPAPGSRPSQRVVAVGALCIISIPPPFLSPSLNVPRRWPPLSS 427
BLAST of EWM28900.1 vs. NCBI_GenBank
Match: gi|1210526797|dbj|GAX14445.1| (hypothetical protein FisN_11Hh096 [Fistulifera solaris]) HSP 1 Score: 122.865 bits (307), Expect = 1.065e-27 Identity = 61/115 (53.04%), Postives = 74/115 (64.35%), Query Frame = 0
Query: 136 SDVEALKALAASRVATGGKWRRGKWTPEEEVYVNRVTEAFHQGLLPLAAGTTLRSYLADKLNCDPMRITKKFSGVGSIGKCIFHPCM--PPQPLKMAEAMVELDRLEAIWRRRLE 248
SD +A K L + R G+ RRGKWT EEE YV RV + F+ G L AGTTLR+YL++KL CDPMRITKKF+G IGK +FHP + P + +A EL LE W RRLE
Sbjct: 141 SDTDASKLLGSER---NGRLRRGKWTAEEEAYVARVIQDFNSGFLDAPAGTTLRTYLSEKLQCDPMRITKKFTGDACIGKRVFHPAVRSPNNVSTIDKAQAELLHLEKRWHRRLE 252
BLAST of EWM28900.1 vs. NCBI_GenBank
Match: gi|813152479|ref|XP_012201238.1| (hypothetical protein SPRG_20254 [Saprolegnia parasitica CBS 223.65] >gi|641534135|gb|KDO28094.1| hypothetical protein SPRG_20254 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 114.775 bits (286), Expect = 2.115e-25 Identity = 56/99 (56.57%), Postives = 67/99 (67.68%), Query Frame = 0
Query: 155 WRRGKWTPEEEVYVNRVTEAFHQGLLPLAAGTTLRSYLADKLNCDPMRITKKFSGVGSIGKCIFHPCMPPQPL---KMAEAMVELDRLEAIWRRRLEEI 250
+R+GKWT EE VY R+T F +GLLPL GT LR YLADKLNC+PMRITKKF+G IGK IF P +PP PL +M EL LE + R+EE+
Sbjct: 57 FRKGKWTDEESVYAERMTHYFKEGLLPLEKGTMLRMYLADKLNCEPMRITKKFTGDECIGKQIFRP-LPPTPLVNARMQSVQTELKALETAFLHRIEEM 154
BLAST of EWM28900.1 vs. NCBI_GenBank
Match: gi|1072237911|gb|OEU22638.1| (putative chitinase [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 117.857 bits (294), Expect = 2.802e-25 Identity = 57/99 (57.58%), Postives = 65/99 (65.66%), Query Frame = 0
Query: 152 GGKWRRGKWTPEEEVYVNRVTEAFHQGLLPLAAGTTLRSYLADKLNCDPMRITKKFSGVGSIGKCIFHPCM--PPQPLKMAEAMVELDRLEAIWRRRLE 248
G RRGKWT EEE YV RV + F+ G L AG TLRSYL+DKL CDPMRITKKF+G IGK +FHP + + +A ELD LE WRRRLE
Sbjct: 188 GTTRRRGKWTVEEEEYVARVIQDFNSGFLNAPAGYTLRSYLSDKLQCDPMRITKKFTGESCIGKRVFHPAVRSAANSGSIDKAQAELDALETRWRRRLE 286
BLAST of EWM28900.1 vs. NCBI_GenBank
Match: gi|669154792|ref|XP_008612958.1| (hypothetical protein SDRG_08838 [Saprolegnia diclina VS20] >gi|669154794|ref|XP_008612959.1| hypothetical protein, variant [Saprolegnia diclina VS20] >gi|530735493|gb|EQC33735.1| hypothetical protein SDRG_08838 [Saprolegnia diclina VS20] >gi|530735494|gb|EQC33736.1| hypothetical protein, variant [Saprolegnia diclina VS20]) HSP 1 Score: 114.39 bits (285), Expect = 4.151e-25 Identity = 56/99 (56.57%), Postives = 67/99 (67.68%), Query Frame = 0
Query: 155 WRRGKWTPEEEVYVNRVTEAFHQGLLPLAAGTTLRSYLADKLNCDPMRITKKFSGVGSIGKCIFHPCMPPQPL---KMAEAMVELDRLEAIWRRRLEEI 250
+R+GKWT EE VY R+T F +GLLPL GT LR YLADKLNC+PMRITKKF+G IGK IF P +PP PL +M EL LE + R+EE+
Sbjct: 69 FRKGKWTDEESVYAERMTHYFKEGLLPLEKGTMLRMYLADKLNCEPMRITKKFTGDECIGKQIFRP-LPPTPLVNARMQSVQTELKALETAFLHRIEEM 166
BLAST of EWM28900.1 vs. NCBI_GenBank
Match: gi|1173929319|gb|OQR82570.1| (hypothetical protein ACHHYP_15855 [Achlya hypogyna]) HSP 1 Score: 112.464 bits (280), Expect = 1.156e-24 Identity = 55/99 (55.56%), Postives = 68/99 (68.69%), Query Frame = 0
Query: 155 WRRGKWTPEEEVYVNRVTEAFHQGLLPLAAGTTLRSYLADKLNCDPMRITKKFSGVGSIGKCIFHPCMPPQPL---KMAEAMVELDRLEAIWRRRLEEI 250
+R+GKWT EE VY R+T F +GLLPL GT LR YLA+KLNC+PMRITKKF+G IGK IF P +PP PL +M EL LE + +R+EE+
Sbjct: 66 FRKGKWTDEESVYAERMTHYFKEGLLPLEKGTMLRMYLAEKLNCEPMRITKKFTGDECIGKQIFRP-LPPTPLVTARMQSVQTELKALETAFLQRIEEM 163
BLAST of EWM28900.1 vs. NCBI_GenBank
Match: gi|219111487|ref|XP_002177495.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217412030|gb|EEC51958.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 114.005 bits (284), Expect = 4.967e-24 Identity = 53/95 (55.79%), Postives = 65/95 (68.42%), Query Frame = 0
Query: 156 RRGKWTPEEEVYVNRVTEAFHQGLLPLAAGTTLRSYLADKLNCDPMRITKKFSGVGSIGKCIFHPCM--PPQPLKMAEAMVELDRLEAIWRRRLE 248
RRGKWT EEE YV RV + F+ G L AGTTLR++L++KL CDPMRITKKF+G IGK +FHP + P + +A EL LE W+RRLE
Sbjct: 227 RRGKWTVEEEAYVARVIQDFNSGFLDAPAGTTLRTFLSEKLQCDPMRITKKFTGDACIGKRVFHPAVRSPSNGTAIDKAQAELHGLERRWQRRLE 321
BLAST of EWM28900.1 vs. NCBI_GenBank
Match: gi|1173956668|gb|OQS03402.1| (hypothetical protein THRCLA_04298 [Thraustotheca clavata]) HSP 1 Score: 110.538 bits (275), Expect = 5.082e-24 Identity = 55/99 (55.56%), Postives = 67/99 (67.68%), Query Frame = 0
Query: 155 WRRGKWTPEEEVYVNRVTEAFHQGLLPLAAGTTLRSYLADKLNCDPMRITKKFSGVGSIGKCIFHPCMPPQPL---KMAEAMVELDRLEAIWRRRLEEI 250
+R+GKWT EE VY R++ F +GLLPL GT LR YLA+KLNC+PMRITKKF+G IGK IF P MPP PL +M EL LE + R+EE+
Sbjct: 48 FRKGKWTEEESVYAERMSYYFKEGLLPLEKGTMLRMYLAEKLNCEPMRITKKFTGDECIGKQIFRP-MPPTPLVSVRMQSVQAELKALETAFLNRIEEM 145
BLAST of EWM28900.1 vs. NCBI_GenBank
Match: gi|953486150|emb|CEG50328.1| (hypothetical protein PHALS_08047 [Plasmopara halstedii]) HSP 1 Score: 110.538 bits (275), Expect = 2.864e-23 Identity = 52/99 (52.53%), Postives = 68/99 (68.69%), Query Frame = 0
Query: 155 WRRGKWTPEEEVYVNRVTEAFHQGLLPLAAGTTLRSYLADKLNCDPMRITKKFSGVGSIGKCIFHPC--MPPQPLKMAEAMVELDRLEAIWRRRLEEIR 251
R+GKWT EE Y ++T+ F +GLLP+ GT LR YL+ KLNC+PMRITKKF+G IGK +F PC P L++ +A VEL LEA + +RL+E R
Sbjct: 130 LRKGKWTEEESRYAAQLTKYFKKGLLPIERGTMLRLYLSQKLNCEPMRITKKFTGGECIGKQVFRPCSLTPESRLRIMQAQVELVALEAAFLKRLKENR 228 The following BLAST results are available for this feature:
BLAST of EWM28900.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
|