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Properties
| Property Name | Value |
|---|
| Product | peptidase s15 |
| Orig transcript id | gnl|cribi|Naga_100822g2.2702.mrna |
| Orig protein id | gnl|cribi|Naga_100822g2.2702 |
| Gbkey | mRNA |
| Note | encoded by transcript variant 1; alternatively spliced |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002458.1 | supercontig | CM002458.1:100021..102271 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna1776 ID=rna1776|Name=rna1776|organism=Nannochloropsis gaditana|type=mRNA|length=1960bp
TTTCACAGCACAGTCACGGGACCAAGCACGTAACGCAGTATTTCCTACAC
TCGAAAGATCAACCAGTGATATTCCACAATGGCAATACCAGTAGCATCAC
GAAACAGCGCACTTGATTCGAACGACAAGTACTAGCTATGCGAAGTCGAT
TTCCTGATCCTCGGGATGTTTTACAGAACGCCGCCCGAATTCTCGTTTAC
CCGCTGTTTTTACTCAATGGACTCCTCCTTGGCCTCCTCTGCTCCCCCTG
CGTCTGCGTCTATTGTGCCTGGAAACGACGTCCTTGGAACATTTCATCGG
ATGCTTATGTATTAGATGAGAGGAACGGAGAAGATGATGAGCCTGAACAT
TTGGTGGAAACCGGCAACGCTTCCTCTCTCCCTGACGCCCCCACAAAAGG
ACTCAGCACACCGTCATTCTCGTGCTTATTTCCTTCTTTCCCAGAGAAAC
CCTCCACCACTATCAACATTAAAGATGTGAAATATACCACCCTCTACCTT
TCAGCGCGGGATGGGACACGCTTGGCAGTGGACGTGTGGCTTCCTCCAGC
CTGCAAGCGTGCGGAGGGGAGAAAAGTCGGTTGCGTCTTCCACCAAGCCC
GGTACTACCGCTCCTTCAAACTGTGGGGACCGGGGAATTTGGCGCGAAAC
GGCTTGCCGATCAATCTTCTCAATAATGAATATTTTGAGCGCTTCCTAAG
CCAAGGTCTCGCGGTCGTGTCGATGGACATCCGGGGATCCGGTGCCTCGT
TCGGTTGCAGCCGGGGGCCGTGGTTGGAAGTCGAGACCGATGACGCGATG
GTAGTGATGGACTGGATCCTCCACCAGCCCTGGTCCAACGGAAGGCTGGG
ACTATGGGGTATCAGCTACGAAGGGACGCGAGCCCTCCTTTCAGGCGTGG
CGGGCCACAGGGGAGTCAAGGCTGTTGTGCCCATGTACATGTTCTTGGAC
GTCTACAGCGATGTCGGGTTCATTGGCGGCATGCACCTCCGAGGCTTCGT
CCAAAACTGGGAACGAATTACTCGCCTCCTCGATAACAACAATTTGCCCA
AGATTGTCTTTCCCTTTACCGATGGCGTGCAACCCGTGTCTTCCGCGGGA
CCAGCAACCCTGAAAGCAGCGCTTCGGGAACATCGAGGGAATTGGAGCTC
GACACTCGACGGTTTAGCTCTGGAATACGCTGACGACAAGAGCGAATTTA
ACGGACGGTCGCCGATGGATGTATCCCCTTACGTCTTTGTTGATGCCTGT
TTGCAGAGAGAGAGGGAAAGAAAAAGGAGCAAAGAGGAAGGAGGGGAGGA
AGGAAGAAGCGTGGAGGGAAACGGAATGCCTCCCTTCTTCTTAGTCAGTG
GATGGTTTGACTCCACGGCTTCGTGTGCGATCAAGCTGGCTCATCATTTA
AGGTGAGTTCAAGGACCCATCGGCGCCAGTTAAGCGATGTGTAAGCGATA
TGCTGACACTGGTTGTCGGTCGATTGGGATGGATGTGTCATGCCTGAGGG
AATGATGACTGCCGTGGACACGTCGCAGGGCAAAGCGGACATGGGCCGTC
CTTCGCCCCGCCCCCTCCTCCAAATTGCATCCTCCCCAACGATTCGTGCC
CCACTCGCCCAAAATGCATCCTCCCCAACGATTCGTGCCCCACTCGCCCA
AAATGCATCCTCCCCAACGATATTCGCCCGACTCCTCCAAAATTCATCCT
CCCCAACGATTCGTGCCCCACTCGCCCAAAATGCATCCTCCCCAACGATT
CGTGCCCCACTCGCCCAAAATTGCATTCTCCCCAACGATTCGTGCCCCAC
TCGCCCAAATTGCATTCTCCCCAAAGATTCTTGCCCGACTTCTCCAAAAT
TCATCCTCCCCAACGATTCTTGCCCCACCCTGCTGCCCTCCCCGGCTTCG
TTTTGTCCCGCGGCGCCCATGTTTCGTGGCTCCCACAGCGACTAAGCGCC
CTCCTTTTGC back to topprotein sequence of rna1776 >rna1776-protein ID=rna1776-protein|Name=rna1776|organism=Nannochloropsis gaditana|type=polypeptide|length=204bp
MTHIFLPMDYDFTDSHCLRQQLLFTSSPLSADLEVTGFPLATLLVSSSQP
DAALFLFLLCVDTQGKAHYITEACLRVSSRATLPPSTPPSPSSSLGTSVL
CYPGLPRHSFRRADVKFLTPGVPVRVEIVFQPSSYRILRGQSIRLAVAGS
NPRDFLPIPLGEGVDFYDLTLHVDAGKDERAGIERRMEGSNAGLGGCRLV
LPVV back to topmRNA from alignment at CM002458.1:100021..102271+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna1776 ID=rna1776|Name=rna1776|organism=Nannochloropsis gaditana|type=mRNA|length=2251bp|location=Sequence derived from alignment at CM002458.1:100021..102271+ (Nannochloropsis gaditana)
ggaggagaggcggtgcGGTTGCGGGTGGATTTGCACAAGGCAAAGCTTTC
CCGGGGTCCCACGCGCTACACGGCCATGACGCACATTTTCCTGCCGgtag
acgagggagggagggagggaggtagggaggtaaagagagaggaagaggct
tCGGCTTGTGCTTCTTTTGTGCACCTCGTATTTTGGGAGGACACGAGAAG
ATTTGAAGGCAGGGTTATCCGTCATATCCTATATTTAAgcgtgccctccc
tcccctccatcctccacctccccatcctcacggtctctctccttcccccc
tccctcctttcctccctcccttcctccgtccccccctttccgtccctgGT
AGATGGACTACGACTTCACGGACTCCCACTGTCTCCggcagcagctcctc
ttcacctcttcccctctgtCTGCCGACCTGGAGGTAAGCAAAGCGTACCC
TTTCCCtacatttcctcctccttcatccatcccctccttctcgccctccc
cccctccctcccttttccttccaggTCACCGGCTTTCCGCTTGctaccct
cctcgtctcctcctcccagcccgacgccgccctcttcctcttcctgcttt
GTGTGGATACGCAAGGAAAGGCCCATTACATCACGGAAGCCTGCTTGCGC
GTCAGCAGCcgtgccaccctccctccctccacccctccctccccctcgtc
ctccctcgggaCCTCGGTGTTGTGCTACCCGGGCCTGCCCCGCCACTCCT
TCCGTCGCGCGGACGTGAAATTCCTGACGCCCGGGGTCCCTGTCCGAGTC
GAGATAGTCTTTCAACCCAGcaggtggggaagaggatgggaaaggaggag
gggtacggggggaggaagggaggaaaggaggaagggaaaggggggagggg
gggaggaaagggcgaaAGGCCAGAGGAgcggtaggagggaaggaaaaggg
gcaTCCACatagggaaaggaggaagatagAACTGTCGCGTGTCGCTTAGA
TAGGGGGCCTCGGATCGGTCCAcaaagggaggtggaggaacaggacggga
ggagggagggagggagggagggagggaggtcaaggGAAGCAAGGGGGTGC
CTTGTCCTCGTGCTGCCGgcgtcccgcccgcccgcgaTGCCGTCATCCAG
GCTCTCTGACAATCATTTCCCTGCGCCCTGGTTACGGAGCAGCATGTGGA
CCTCATTACTCACGCACAATGTCTGCCCTACTTTTCCACAGTTACCGCAT
TCTTCGAGGACAGTCGATCCGCCTGGCCGTGGCTGGCAGCAACCCTCGCG
ATTTCTTGCCGATCCCACTCGGAGAAGGGGTGGATTTCTACGATTTGACC
CTCCATGTGGATGCAGGCAAGGATGAGAGGGCAGGAATTGAAAGGAGAAT
GGAAGGATCGAATGCGGGACTGGGTGGTTGCCGCCTTGTGTTACCTGTGG
TGTAAAGAGAGCGAAGACAAAACCAGGGGGGTTGGAAACGGGGCAGACTG
GTCTCAAGTACCAGGGTCAAGAGGAAGTGCGCGGAGTGAAGATGACATAG
CCATATTGACTGACCACgaagagagaaggacaaaGGCAAGGAACCTCATG
TAAATGCAGGACGGATTAATTTGGGTCTCTTTTGTGGCTGTCCTTGGTAA
TGTTCTTAAACTCTGTGCGGTGCTTTCCACCCATTGCTAGATGGAGTTAT
CCTACCATCTTACATGCTGCATTCATTCGCACAGGCTATGCTCGTACATG
GTTGTTTTTCCGCCGGGGAAGGCTCCTTATCTTCTAGATTTCTCCTTCAT
TAACGATAGACTGtggctcttttttttcttcaagaTTATATCTCATGTTC
TGCAATTGTTAGATGCACTACATTATATGTAGTGTTTTCAACTCTCTACC
AGGCTATTTACAGCAAGGAAAGAAACGGCATAGGCAGCGATTTCACGCCT
TCCAACACAGAGAAAGACACCTTTTAACAAAGCGGAAAATATACCTAGGC
TAGAGGCTCACTCACAAAAACGAGAATCTACTTCAAAATGTAATCTTTCG
TCGTTTTTATCCTGTTCATGGTTTCAGACGCATTAAACCGAGATTTTGGA
TGGAGTCTCCTTTAGGGTTTCGCGCCCCCCACGGGGCCGCCAGTCGGAGA
AAAATCGGGAAAAAAAGTTACTTTCCAGACACATGCCTTCAGACCACTCC
AATAATCTGGCCACACTGCTAAACGTTGCGAGGGTCCTGCATGACAATGC
G back to topCoding sequence (CDS) from alignment at CM002458.1:100021..102271+ >rna1776 ID=rna1776|Name=rna1776|organism=Nannochloropsis gaditana|type=CDS|length=2460bp|location=Sequence derived from alignment at CM002458.1:100021..102271+ (Nannochloropsis gaditana)
ATGACGCACATTTTCCTGCCGATGGACTACGACTTCACGGACTCCCACTG
TCTCCggcagcagctcctcttcacctcttcccctctgtCTGCCGACCTGG
AGgTCACCGGCTTTCCGCTTGctaccctcctcgtctcctcctcccagccc
gacgccgccctcttcctcttcctgctttGTGTGGATACGCAAGGAAAGGC
CCATTACATCACGGAAGCCTGCTTGCGCGTCAGCAGCcgtgccaccctcc
ctccctccacccctccctccccctcgtcctccctcgggaCCTCGGTGTTG
TGCTACCCGGGCCTGCCCCGCCACTCCTTCCGTCGCGCGGACGTGAAATT
CCTGACGCCCGGGGTCCCTGTCCGAGTCGAGATAGTCTTTCAACCCAGca
gTTACCGCATTCTTCGAGGACAGTCGATCCGCCTGGCCGTGGCTGGCAGC
AACCCTCGCGATTTCTTGCCGATCCCACTCGGAGAAGGGGTGGATTTCTA
CGATTTGACCCTCCATGTGGATGCAGGCAAGGATGAGAGGGCAGGAATTG
AAAGGAGAATGGAAGGATCGAATGCGGGACTGGGTGGTTGCCGCCTTGTG
TTACCTGTGGTGTAAATGACGCACATTTTCCTGCCGATGGACTACGACTT
CACGGACTCCCACTGTCTCCggcagcagctcctcttcacctcttcccctc
tgtCTGCCGACCTGGAGgTCACCGGCTTTCCGCTTGctaccctcctcgtc
tcctcctcccagcccgacgccgccctcttcctcttcctgctttGTGTGGA
TACGCAAGGAAAGGCCCATTACATCACGGAAGCCTGCTTGCGCGTCAGCA
GCcgtgccaccctccctccctccacccctccctccccctcgtcctccctc
gggaCCTCGGTGTTGTGCTACCCGGGCCTGCCCCGCCACTCCTTCCGTCG
CGCGGACGTGAAATTCCTGACGCCCGGGGTCCCTGTCCGAGTCGAGATAG
TCTTTCAACCCAGcagTTACCGCATTCTTCGAGGACAGTCGATCCGCCTG
GCCGTGGCTGGCAGCAACCCTCGCGATTTCTTGCCGATCCCACTCGGAGA
AGGGGTGGATTTCTACGATTTGACCCTCCATGTGGATGCAGGCAAGGATG
AGAGGGCAGGAATTGAAAGGAGAATGGAAGGATCGAATGCGGGACTGGGT
GGTTGCCGCCTTGTGTTACCTGTGGTGTAAATGACGCACATTTTCCTGCC
GATGGACTACGACTTCACGGACTCCCACTGTCTCCggcagcagctcctct
tcacctcttcccctctgtCTGCCGACCTGGAGgTCACCGGCTTTCCGCTT
Gctaccctcctcgtctcctcctcccagcccgacgccgccctcttcctctt
cctgctttGTGTGGATACGCAAGGAAAGGCCCATTACATCACGGAAGCCT
GCTTGCGCGTCAGCAGCcgtgccaccctccctccctccacccctccctcc
ccctcgtcctccctcgggaCCTCGGTGTTGTGCTACCCGGGCCTGCCCCG
CCACTCCTTCCGTCGCGCGGACGTGAAATTCCTGACGCCCGGGGTCCCTG
TCCGAGTCGAGATAGTCTTTCAACCCAGcagTTACCGCATTCTTCGAGGA
CAGTCGATCCGCCTGGCCGTGGCTGGCAGCAACCCTCGCGATTTCTTGCC
GATCCCACTCGGAGAAGGGGTGGATTTCTACGATTTGACCCTCCATGTGG
ATGCAGGCAAGGATGAGAGGGCAGGAATTGAAAGGAGAATGGAAGGATCG
AATGCGGGACTGGGTGGTTGCCGCCTTGTGTTACCTGTGGTGTAAATGAC
GCACATTTTCCTGCCGATGGACTACGACTTCACGGACTCCCACTGTCTCC
ggcagcagctcctcttcacctcttcccctctgtCTGCCGACCTGGAGgTC
ACCGGCTTTCCGCTTGctaccctcctcgtctcctcctcccagcccgacgc
cgccctcttcctcttcctgctttGTGTGGATACGCAAGGAAAGGCCCATT
ACATCACGGAAGCCTGCTTGCGCGTCAGCAGCcgtgccaccctccctccc
tccacccctccctccccctcgtcctccctcgggaCCTCGGTGTTGTGCTA
CCCGGGCCTGCCCCGCCACTCCTTCCGTCGCGCGGACGTGAAATTCCTGA
CGCCCGGGGTCCCTGTCCGAGTCGAGATAGTCTTTCAACCCAGcagTTAC
CGCATTCTTCGAGGACAGTCGATCCGCCTGGCCGTGGCTGGCAGCAACCC
TCGCGATTTCTTGCCGATCCCACTCGGAGAAGGGGTGGATTTCTACGATT
TGACCCTCCATGTGGATGCAGGCAAGGATGAGAGGGCAGGAATTGAAAGG
AGAATGGAAGGATCGAATGCGGGACTGGGTGGTTGCCGCCTTGTGTTACC
TGTGGTGTAA back to top
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