Naga_100142g3, gene1686 (gene) Nannochloropsis gaditana

Overview
NameNaga_100142g3
Unique Namegene1686
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002458.1:38401..42729 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100142g3
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002458.1supercontigCM002458.1:38401..42729 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
GO:0005488binding
Vocabulary: Biological Process
TermDefinition
GO:0009056catabolic process
GO:0009058biosynthetic process
GO:0006139nucleobase-containing compound metabolic process
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL107ngnoL107Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO04G05110NO04G05110Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna1753rna1753-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna1753rna1753Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna1753

>rna1753-protein ID=rna1753-protein|Name=rna1753|organism=Nannochloropsis gaditana|type=polypeptide|length=591bp
MVDVLNACGVDYVCLGNHETDIPHRDMLERIVESDFVWINSSIPSLPLLD
VPLEPQKIPEYALLEVGGIEVALLGNAEGKDSIAADRELAQTRLFPLILG
GHDHDPFLETYGEGGREGGKEGSPGGGWSSRIPSAASLQEWGGERERVEG
EKEVSERCTLVKVGMDATWIGVVDVAFGAEEGGAEGGAEGGREDGGDAGN
GKRRRRRRLEVKACIKEAASFAVDPAVQERVEVHWRVLEELERAVLCPVP
AQTPLSSKGVRKMQTSVGTMLLTAARQALQVDCVFVNGGNIRASVAYPLS
QKVFTYKDLKAEIPFPCEMVTVRLPGSVLSSLLQYSRQFALLDPPVEKGG
FLQVDEGVRVDASTHAITHVQGRPLEASRMYSLATTWGVVSGIDDLRPIL
DYREAHPEAVFPTSAEAGRGLKEVLVAHHSRMLWWDLAKHVGFRAMDTDG
DGVLSQKEVAAATQACYGEALSRLVVANLMATADFDGDGVISVKEFIRIC
LSQEAAFQDGDTDNDERLSFEEVWSLLKAHYDGNSNGSHTPIRAAGEGKG
LTEADVREMYDEIDSDKRGGISWAEFREHMARQREPTALVI
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Synonyms
Publications