EWM28933.1, cds1748 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM28933.1 vs. NCBI_GenBank
Match: gi|585111399|gb|EWM28933.1| (hypothetical protein Naga_100142g4 [Nannochloropsis gaditana]) HSP 1 Score: 759.985 bits (1961), Expect = 0.000e+0 Identity = 368/368 (100.00%), Postives = 368/368 (100.00%), Query Frame = 0 Query: 1 MLTLATPRNYFSELCRITSAYQRFEETMMHHLVCMMLLTTTALIPGNAFFLSHRMRKVSWNLHVAKTGISAMPLKVDPKVVPVIYDGPKAEGGEVKREVGAILEEYMLALEVGPSTLLPDERGLYIRLIGKDVEEATVEWGSILCGYGEGSMEPSPGEGDKSVLFSLPSAEAAVFYNKELVPIFEVLADLPDGTGLQGHSVTVGARGAIEVAPLTDEKSYFVPKAGLPAKAAFIGLFANDLAIGGPSAPATKEEYEEASDQKNIAALVWRVVYDKEKGMVLPSRPVVTFGRSVTFKNKEPMEGKIQKLIRWPRSRNERSGLAWYNRRERLKKYNFSKSLHVCQQQRIAAYLPHLPWSSFRGRLCPSTA 368 MLTLATPRNYFSELCRITSAYQRFEETMMHHLVCMMLLTTTALIPGNAFFLSHRMRKVSWNLHVAKTGISAMPLKVDPKVVPVIYDGPKAEGGEVKREVGAILEEYMLALEVGPSTLLPDERGLYIRLIGKDVEEATVEWGSILCGYGEGSMEPSPGEGDKSVLFSLPSAEAAVFYNKELVPIFEVLADLPDGTGLQGHSVTVGARGAIEVAPLTDEKSYFVPKAGLPAKAAFIGLFANDLAIGGPSAPATKEEYEEASDQKNIAALVWRVVYDKEKGMVLPSRPVVTFGRSVTFKNKEPMEGKIQKLIRWPRSRNERSGLAWYNRRERLKKYNFSKSLHVCQQQRIAAYLPHLPWSSFRGRLCPSTA Sbjct: 1 MLTLATPRNYFSELCRITSAYQRFEETMMHHLVCMMLLTTTALIPGNAFFLSHRMRKVSWNLHVAKTGISAMPLKVDPKVVPVIYDGPKAEGGEVKREVGAILEEYMLALEVGPSTLLPDERGLYIRLIGKDVEEATVEWGSILCGYGEGSMEPSPGEGDKSVLFSLPSAEAAVFYNKELVPIFEVLADLPDGTGLQGHSVTVGARGAIEVAPLTDEKSYFVPKAGLPAKAAFIGLFANDLAIGGPSAPATKEEYEEASDQKNIAALVWRVVYDKEKGMVLPSRPVVTFGRSVTFKNKEPMEGKIQKLIRWPRSRNERSGLAWYNRRERLKKYNFSKSLHVCQQQRIAAYLPHLPWSSFRGRLCPSTA 368
BLAST of EWM28933.1 vs. NCBI_GenBank
Match: gi|553184085|ref|XP_005854025.1| (hypothetical protein NGA_0442400 [Nannochloropsis gaditana CCMP526] >gi|422295036|gb|EKU22335.1| hypothetical protein NGA_0442400 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 372.089 bits (954), Expect = 1.054e-126 Identity = 191/213 (89.67%), Postives = 191/213 (89.67%), Query Frame = 0 Query: 55 MRKVSWNLHVAKTGISAMPLKVDPKVVPVIYDGPKAEGGEVKREVGAILEEYMLALEVGPSTLLPDERGLYIRLIGKDVEEATVEWGSILCGYGEGSMEPSPGEGDKSVLFSLPSAEAAVFYNKELVPIFEVLADLPDGTGLQGHSVTVGARGAIEVAPLTDEKSYFVPKAGLPAKAAFIGLFANDLAIGGPSAPATKEEYEEASDQKNIAAL 267 M KVSWNLHVAKTGISAMPLKVDPKVVPVIYDGPKAEGGEVKREVGAILEEYMLALEVGPSTLLPDERGLYIRLIGKDVEEATVEWGSILCGYGEGSMEPSPGEGDKSVLFSLPSAEAAVFYNKELVPIFEVLADLPDGTGLQG YFVPKAGLPAKAAFIGLFANDLAIGGPSAPATKEEYEEASDQKNIAAL Sbjct: 1 MMKVSWNLHVAKTGISAMPLKVDPKVVPVIYDGPKAEGGEVKREVGAILEEYMLALEVGPSTLLPDERGLYIRLIGKDVEEATVEWGSILCGYGEGSMEPSPGEGDKSVLFSLPSAEAAVFYNKELVPIFEVLADLPDGTGLQG---------------------YFVPKAGLPAKAAFIGLFANDLAIGGPSAPATKEEYEEASDQKNIAAL 192
BLAST of EWM28933.1 vs. NCBI_GenBank
Match: gi|922856121|gb|KOO24509.1| (hypothetical protein Ctob_002764 [Chrysochromulina sp. CCMP291]) HSP 1 Score: 103.605 bits (257), Expect = 2.209e-21 Identity = 88/243 (36.21%), Postives = 119/243 (48.97%), Query Frame = 0 Query: 82 PVIYDGPKAEGGEVKREVGAILE--EYMLALEVGPSTLLPDER----GLYIRLIGKDVEEATVEWGSILCGYGEGSMEPSPGE-GDKSVLFSLPSAEAAVFYNKELVPIFEVLADLPDGTGLQGHSVT----VGARGAIEVAPLTDEKSYFVPKAGLPAKAAF-IGLFANDLAIGGPSAPATKEEYEEASDQKNIAALVWRVVYDKEKGMVL-PSRPVVTFGRSVTFKNKEPMEGKIQKLIRW 311 P Y GP GE R V +E E L LEV S + GL++RL + VE T+ G +CGY G M SP E G K+V F L +A + F+ +EL + +LA D + GH++ G AIE P YFVP A + IG F+NDLA+ G S A + Y S ++N+ LV R+ + E+ L P+RPV T R VTF N EPME + +R+ Sbjct: 85 PPPYQGPTPAPGETLRGVVCSIELPEVGLILEVAESLASGGDGQAGLGLFVRL-AEGVESVTLNEGVAMCGYAHGQMMASPDELGGKTVGFWLKTALTSFFFERELHTVASLLATGADVEAIAGHTIVRDAHTGEVQAIEADPEWAGARYFVPHTDQGALSIMNIGQFSNDLAMPGASVNAA-DGYGTDSSERNLLVLVQRMERNPERPSELRPTRPVSTLSRDVTFVNTEPMELGCEYGMRY 325
BLAST of EWM28933.1 vs. NCBI_GenBank
Match: gi|551673797|ref|XP_005839654.1| (hypothetical protein GUITHDRAFT_133706 [Guillardia theta CCMP2712] >gi|428183817|gb|EKX52674.1| hypothetical protein GUITHDRAFT_133706 [Guillardia theta CCMP2712]) HSP 1 Score: 90.8929 bits (224), Expect = 2.413e-17 Identity = 76/228 (33.33%), Postives = 118/228 (51.75%), Query Frame = 0 Query: 85 YDGPKAEGGEVKREVGAILEEYMLALEVGPSTLLPDERGLYIRLIGKD-VEEATVEWGSILCGYGEGSMEPSPGEGDKSVLFSLPSAEAAVFYNKELVPIFEV---LADLPDG-TG-LQGHSVTVG-ARGAIEVAPLTD--EKSYFVP-KAGLPAKAAFIGLFANDLAIGGPSAPATKEEYEEASDQKNIAALVWRVVYDKEKGMVLPSRPVVTFGRSVTFKNKEPME 302 Y GP + K + G ++++ + + VG S + GLY+ + + V E T+ G+++ GY + S +GDK+V F+ + V Y++EL+ + + ADL D TG + GH++ A + V P + +FVP + G P A G+FANDLA T+EEY S QKN+ LVWR+ E G + P+ PVV ++V F+N EPME Sbjct: 23 YMGPSQS--QEKMKYGCLVQDLGIEIFVGESKVCSG-MGLYVAVAASEHVAEVTLPAGTLISGYSKEGTWSSLSQGDKAVAFAFDKPDTLVVYDRELMTLIDAAGSAADLSDNMTGAVAGHNIFFDEASQDLRVEPDVNWARGRFFVPVEDGGPVGPANFGMFANDLAY---EEGMTQEEYAR-SMQKNVLQLVWRMAV--EDGHLSPTWPVVFLNQAVCFRNAEPME 241
BLAST of EWM28933.1 vs. NCBI_GenBank
Match: gi|1072221740|gb|OEU06522.1| (hypothetical protein FRACYDRAFT_265870 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 75.0998 bits (183), Expect = 1.985e-11 Identity = 87/333 (26.13%), Postives = 141/333 (42.34%), Query Frame = 0 Query: 28 MMHHLVCMMLLTTTALIPGNAF---------FLSHRMRKVSWNLHVAKTGISAMPLKVDPKVVPVIYDGPKAEGGEVKREVGAILEEYMLALEVGPSTLLPDERGLYIRLI-----------------GKDVEEATVEWGSILCGYGEGSMEPSPGEGDKSVLFSLPSAEAA----VFYNKELVPIFEVLADLPD------------------GTGLQGHSVTVGAR-GAIEVAPLTDEKS-YFVPKAGLPAKAAF----IGLFANDLAIGGPSAPATKEEYEEASDQKNIAALVWRVVYDKEKGMVLPSRPVVTFGRSVTFKNKEPMEGKIQ 306 ++ ++ +++ TT +I +F + R R + + T I++ ++P V PV G E G +EE L + GPS + RGL++ + G VEE + G+ +CGY G EGDKSV F +A VFYN+ L+ + + + + + L GH+V V A G IE+ + S F+P P ++ F +G++ANDLA P++ T+ Y S++ NI LVWR+ D+ G ++P+ PVV + N PME +Q Sbjct: 3 LLSYVALALIIDTTVIIHAFSFHQNNPYVPSIIFDRTRTF-LSCSTSTTDITS----IEPYVGPV--------GNIADMEGGIAVEELALNVLTGPSLVASGGRGLFLCIYDDEGDDDDDEDYSNNTEGGAVEEIIIPQGTPICGYARGYFTDQQ-EGDKSVGFLFNKENSANVTAVFYNQTLMTLGDAVWSVYNEEWRARAAEENNNTDDSSNNLLFGHTVKVNAETGDIEIKADQEFHSRIFIPDT--PEESQFAATSLGVYANDLAYD-PNSNETQ--YFINSEKNNILELVWRLAKDEITGTLVPTWPVVVARQDFRLLNTIPMEVGLQ 316
BLAST of EWM28933.1 vs. NCBI_GenBank
Match: gi|551601840|ref|XP_005782536.1| (hypothetical protein EMIHUDRAFT_203578 [Emiliania huxleyi CCMP1516] >gi|485635425|gb|EOD30107.1| hypothetical protein EMIHUDRAFT_203578 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 62.3882 bits (150), Expect = 2.121e-7 Identity = 64/229 (27.95%), Postives = 94/229 (41.05%), Query Frame = 0 Query: 79 KVVPVIYDGPKAEGGEVKREVGAILEEYMLALEVGPSTLLPDERGLYIRLIGKDVEEATVEWGSILCGYGEGSME-PSPGEGDKSVLFSLPSAEAAVFYNKELVPIFEVLADLPDGTGLQGHSVTVGARGAIE-VAPLTD--EKSYFVP-KAGLPAKAAFIGLFANDLAIGGPSAPATKEEYEEASDQKNIAALVWRVVYDKEKGMVLPSRPVVTFGRSVTFKNKEPME 302 + P +YDGP G L+ + ++E LP+ +G V+ T+ G CGY G ME + EG K+V F+L SA+ +VF+ ++L + ++LA + GH V A G ++ ++P D YFVP + IG +NDLAI + PSRPV T VTF+N PME Sbjct: 84 QAAPPVYDGPTPAKG---------LQGLVCSVE------LPE--------VGLGVDSVTLPAGVAFCGYAAGGMEMAADSEGGKTVGFALRSADTSVFFEQQLWSVADLLAPGSGVRHIAGHEVERDAGGRVQAISPDPDWGGARYFVPSREQGDLSIMNIGQMSNDLAI-----------------------------------VARPSRPVSTLAADVTFRNSAPME 254
BLAST of EWM28933.1 vs. NCBI_GenBank
Match: gi|551563985|ref|XP_005768595.1| (hypothetical protein EMIHUDRAFT_459195 [Emiliania huxleyi CCMP1516] >gi|485619337|gb|EOD16166.1| hypothetical protein EMIHUDRAFT_459195 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 62.3882 bits (150), Expect = 2.483e-7 Identity = 64/229 (27.95%), Postives = 94/229 (41.05%), Query Frame = 0 Query: 79 KVVPVIYDGPKAEGGEVKREVGAILEEYMLALEVGPSTLLPDERGLYIRLIGKDVEEATVEWGSILCGYGEGSME-PSPGEGDKSVLFSLPSAEAAVFYNKELVPIFEVLADLPDGTGLQGHSVTVGARGAIE-VAPLTD--EKSYFVP-KAGLPAKAAFIGLFANDLAIGGPSAPATKEEYEEASDQKNIAALVWRVVYDKEKGMVLPSRPVVTFGRSVTFKNKEPME 302 + P +YDGP G L+ + ++E LP+ +G V+ T+ G CGY G ME + EG K+V F+L SA+ +VF+ ++L + ++LA + GH V A G ++ ++P D YFVP + IG +NDLAI + PSRPV T VTF+N PME Sbjct: 107 QAAPPVYDGPTPAKG---------LQGLVCSVE------LPE--------VGLGVDSVTLPAGVAFCGYAAGGMEMAADSEGGKTVGFALRSADTSVFFEQQLWSVADLLAPGSGVRHIAGHEVERDAGGRVQAISPDPDWGGARYFVPSREQGDLSIMNIGQMSNDLAI-----------------------------------VARPSRPVSTLAADVTFRNSAPME 277 The following BLAST results are available for this feature:
BLAST of EWM28933.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 7
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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