Naga_100142g13, gene1676 (gene) Nannochloropsis gaditana

Overview
NameNaga_100142g13
Unique Namegene1676
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002458.1:9288..13033 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100142g13
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002458.1supercontigCM002458.1:9288..13033 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0000166nucleotide binding
GO:0004518nuclease activity
GO:0016301kinase activity
Vocabulary: Biological Process
TermDefinition
GO:0006464cellular protein modification process
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL107ngnoL107Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO04G05010NO04G05010Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna1743rna1743-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna1743rna1743Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna1743

>rna1743-protein ID=rna1743-protein|Name=rna1743|organism=Nannochloropsis gaditana|type=polypeptide|length=878bp
MPRRLSQQSLHPPHPLREASSSSNTTYSVFRGPASWTGPPPRPPPLPPLP
SWSWLSPSTWLAASRGMDDLLLLLLLGVAALLVTLFQRSSLTSSSFLRPF
SPSSLPTPDPASPPPTPDAEGVLRVGRLRVCVEEVLGFGCHGTIVFKGKL
DERPVAVKRMLRAFHAAADREIRLLIESDGHPNVVRYFLREQSGDFVYLA
LELCVCSLRDVVGRLEKAMEAVGEGGGGRRRAQQSRRVFVGKLSQREGAK
DGAEGNETLGVVPAPVRSALFQIAKGVTHLHSLRIVHRDLKPHNILLASA
STTPSAPASHSPSAPSSIPPLLVDGVEELSQYVCKISDMGVGKLLALGQS
SFGVTSLSAPGKSGKSRFPPPSTIATTGAPPSSSSSSSSMAPCPEEAQSS
VPLGPGSVGWQAPEVLAARLGLEDTGAVAGGREEEVGAGNGHGLAGSSSS
FPAPPSASGRRTQAVDVFSLGCVFYTVLVPGAHPFGEWYERERNILEGKR
DLSGLAESPEARHLLEAMLSPDPARRPTARMVLHHPFFWAEDRRLAFLVD
FSDRVEQEPADSLLALAVEAGAAEVVGSAWDARLDAGLLVDVNRYRKYDT
ASVRDCLRILRNKRHHFHELPEAVQRVLAPLPGGLYRYWQRHFPRLLMHC
HGVCTRLLTRDKLFQTYMGPEKDLRQDYEEDNQVAASQELSHRGQGKAGG
EGPPLLSQSGAPHTPSLEEKGAGAEPASPDPANALFLSQVVVFAGSSLAA
SSNSRGWRGGPVVLEEKGGCRELEEVKYADGNGCHNSVKIGLIIEHREPA
RDWVSATARGASTEETFRGGAGTGKSRRAKIDLYDNEKARVTVVQVMGAQ
ALPCTRMLKVTQKLNEDTKQHVLRGILS
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Synonyms
Publications