EWM28941.1, cds1730 (CDS) Nannochloropsis gaditana
|
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM28941.1 vs. NCBI_GenBank
Match: gi|585111411|gb|EWM28941.1| (protein kinase domain containing protein [Nannochloropsis gaditana]) HSP 1 Score: 906.746 bits (2342), Expect = 0.000e+0 Identity = 446/446 (100.00%), Postives = 446/446 (100.00%), Query Frame = 0
Query: 1 MEPSKNERPTSSSSFLPALSPNSSSHNPITTIQDFHVLSKLGLGAYGSVYQVIRKADNHTYAIKRVNLEGLDQRDLAMALNEIRLLSSFRHPRIIRCYETFLDGPTHLCIVMEYCGFQDLARKIQRYRARGERVDERVVWVYLVQCLEALSALHALRVLHRDIKPANILLDKEGNAKLGDLNVSKCLDDETGEIHAVWGTLPYMAPEIWEGKPYGFASDLYSLGCTLFELTKLVPPFDGPTPLHLRRAVLKRQFQSDLATDTVYSHDLRHVILSRLLHHDPAQRLTADSLMQLPEVASRLELVRHKLPTDLPAALPLTPSSLLLKHLNTPIARNSSEVREEGKSLEGSPVQLEEGGADTTRGSTNEEAQGSASLTLGALPSLLPTLLPGPSYPPLSSAQALSPSASLPVSSSAPERSRETAHDHPRQACPLPPPFPFPLLWTGRTL 446
MEPSKNERPTSSSSFLPALSPNSSSHNPITTIQDFHVLSKLGLGAYGSVYQVIRKADNHTYAIKRVNLEGLDQRDLAMALNEIRLLSSFRHPRIIRCYETFLDGPTHLCIVMEYCGFQDLARKIQRYRARGERVDERVVWVYLVQCLEALSALHALRVLHRDIKPANILLDKEGNAKLGDLNVSKCLDDETGEIHAVWGTLPYMAPEIWEGKPYGFASDLYSLGCTLFELTKLVPPFDGPTPLHLRRAVLKRQFQSDLATDTVYSHDLRHVILSRLLHHDPAQRLTADSLMQLPEVASRLELVRHKLPTDLPAALPLTPSSLLLKHLNTPIARNSSEVREEGKSLEGSPVQLEEGGADTTRGSTNEEAQGSASLTLGALPSLLPTLLPGPSYPPLSSAQALSPSASLPVSSSAPERSRETAHDHPRQACPLPPPFPFPLLWTGRTL
Sbjct: 1 MEPSKNERPTSSSSFLPALSPNSSSHNPITTIQDFHVLSKLGLGAYGSVYQVIRKADNHTYAIKRVNLEGLDQRDLAMALNEIRLLSSFRHPRIIRCYETFLDGPTHLCIVMEYCGFQDLARKIQRYRARGERVDERVVWVYLVQCLEALSALHALRVLHRDIKPANILLDKEGNAKLGDLNVSKCLDDETGEIHAVWGTLPYMAPEIWEGKPYGFASDLYSLGCTLFELTKLVPPFDGPTPLHLRRAVLKRQFQSDLATDTVYSHDLRHVILSRLLHHDPAQRLTADSLMQLPEVASRLELVRHKLPTDLPAALPLTPSSLLLKHLNTPIARNSSEVREEGKSLEGSPVQLEEGGADTTRGSTNEEAQGSASLTLGALPSLLPTLLPGPSYPPLSSAQALSPSASLPVSSSAPERSRETAHDHPRQACPLPPPFPFPLLWTGRTL 446
BLAST of EWM28941.1 vs. NCBI_GenBank
Match: gi|553185631|ref|XP_005854281.1| (protein kinase domain protein, partial [Nannochloropsis gaditana CCMP526] >gi|422294778|gb|EKU22078.1| protein kinase domain protein, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 518.079 bits (1333), Expect = 0.000e+0 Identity = 247/247 (100.00%), Postives = 247/247 (100.00%), Query Frame = 0
Query: 5 KNERPTSSSSFLPALSPNSSSHNPITTIQDFHVLSKLGLGAYGSVYQVIRKADNHTYAIKRVNLEGLDQRDLAMALNEIRLLSSFRHPRIIRCYETFLDGPTHLCIVMEYCGFQDLARKIQRYRARGERVDERVVWVYLVQCLEALSALHALRVLHRDIKPANILLDKEGNAKLGDLNVSKCLDDETGEIHAVWGTLPYMAPEIWEGKPYGFASDLYSLGCTLFELTKLVPPFDGPTPLHLRRAVLK 251
KNERPTSSSSFLPALSPNSSSHNPITTIQDFHVLSKLGLGAYGSVYQVIRKADNHTYAIKRVNLEGLDQRDLAMALNEIRLLSSFRHPRIIRCYETFLDGPTHLCIVMEYCGFQDLARKIQRYRARGERVDERVVWVYLVQCLEALSALHALRVLHRDIKPANILLDKEGNAKLGDLNVSKCLDDETGEIHAVWGTLPYMAPEIWEGKPYGFASDLYSLGCTLFELTKLVPPFDGPTPLHLRRAVLK
Sbjct: 1 KNERPTSSSSFLPALSPNSSSHNPITTIQDFHVLSKLGLGAYGSVYQVIRKADNHTYAIKRVNLEGLDQRDLAMALNEIRLLSSFRHPRIIRCYETFLDGPTHLCIVMEYCGFQDLARKIQRYRARGERVDERVVWVYLVQCLEALSALHALRVLHRDIKPANILLDKEGNAKLGDLNVSKCLDDETGEIHAVWGTLPYMAPEIWEGKPYGFASDLYSLGCTLFELTKLVPPFDGPTPLHLRRAVLK 247
BLAST of EWM28941.1 vs. NCBI_GenBank
Match: gi|553195174|ref|XP_005856094.1| (protein kinase 2-like protein [Nannochloropsis gaditana CCMP526] >gi|422292968|gb|EKU20269.1| protein kinase 2-like protein [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 266.929 bits (681), Expect = 1.496e-80 Identity = 138/276 (50.00%), Postives = 183/276 (66.30%), Query Frame = 0
Query: 32 IQDFHVLSKLGLGAYGSVYQVIRKADNHTYAIKRVNLEGLDQRDLAMALNEIRLLSSFRHPRIIRCYETFLDGPTHLCIVMEYCGFQDLARKIQRYRARGERVDERVVWVYLVQCLEALSALHALRVLHRDIKPANILLDKEGNAKLGDLNVSKCLDDETGEIHAVWGTLPYMAPEIWEGKPYGFASDLYSLGCTLFELTKLVPPFDGPTPLHLRRAVLKRQFQSDLATDTVYSHDLRHVILSRLLHHDPAQRLTADSLMQLPEVASRLELVRHKL 307
I+ F +L LG GA+ SV++V R D TYA+K+V++ LD ++L ALNEIRLL+SF HPRI+R +ETF+DG +LCIVMEYCG+ DLA KI+RY R E +DERV+WVY++Q LE L ALH VLHRD+KPAN L ++G+ K+GD+NVSK + D G GT YM+PEIW +PY A+D++SLGC ++EL L PPF G L+ AVL F +VYS DL VI +R+L R +A + PEV +R LV++ L
Sbjct: 3 IEQFEILKSLGEGAFASVHKVTRLVDGKTYALKKVDVSSLDDKELLSALNEIRLLASFGHPRIVRLHETFMDG-NNLCIVMEYCGWGDLAMKIKRYVKRREYIDERVIWVYMIQILEGLKALHERNVLHRDLKPANCFLAEDGSIKIGDMNVSKVMKD--GNAKTQIGTPYYMSPEIWARRPYNHATDIWSLGCLIYELCALRPPFLGNNMSELKTAVLGGNFN---PVPSVYSKDLGSVI-ARMLLAAARDRPSAAEALAYPEVNARKCLVKNVL 271
BLAST of EWM28941.1 vs. NCBI_GenBank
Match: gi|585104019|gb|EWM23138.1| (protein kinase [Nannochloropsis gaditana]) HSP 1 Score: 266.929 bits (681), Expect = 1.682e-80 Identity = 138/276 (50.00%), Postives = 183/276 (66.30%), Query Frame = 0
Query: 32 IQDFHVLSKLGLGAYGSVYQVIRKADNHTYAIKRVNLEGLDQRDLAMALNEIRLLSSFRHPRIIRCYETFLDGPTHLCIVMEYCGFQDLARKIQRYRARGERVDERVVWVYLVQCLEALSALHALRVLHRDIKPANILLDKEGNAKLGDLNVSKCLDDETGEIHAVWGTLPYMAPEIWEGKPYGFASDLYSLGCTLFELTKLVPPFDGPTPLHLRRAVLKRQFQSDLATDTVYSHDLRHVILSRLLHHDPAQRLTADSLMQLPEVASRLELVRHKL 307
I+ F +L LG GA+ SV++V R D TYA+K+V++ LD ++L ALNEIRLL+SF HPRI+R +ETF+DG +LCIVMEYCG+ DLA KI+RY R E +DERV+WVY++Q LE L ALH VLHRD+KPAN L ++G+ K+GD+NVSK + D G GT YM+PEIW +PY A+D++SLGC ++EL L PPF G L+ AVL F +VYS DL VI +R+L R +A + PEV +R LV++ L
Sbjct: 3 IEQFEILKSLGEGAFASVHKVTRLVDGKTYALKKVDVSSLDDKELLSALNEIRLLASFGHPRIVRLHETFMDG-NNLCIVMEYCGWGDLAMKIKRYVKRREYIDERVIWVYMIQILEGLKALHERNVLHRDLKPANCFLAEDGSIKIGDMNVSKVMKD--GNAKTQIGTPYYMSPEIWARRPYNHATDIWSLGCLIYELCALRPPFLGNNMSELKTAVLGGNFN---PVPSVYSKDLGSVI-ARMLLAAARDRPSAAEALAYPEVNARKCLVKNVL 271
BLAST of EWM28941.1 vs. NCBI_GenBank
Match: gi|1134869305|gb|OMJ67869.1| (hypothetical protein SteCoe_34862 [Stentor coeruleus]) HSP 1 Score: 226.483 bits (576), Expect = 4.827e-66 Identity = 142/408 (34.80%), Postives = 215/408 (52.70%), Query Frame = 0
Query: 31 TIQDFHVLSKLGLGAYGSVYQVIRKADNHTYAIKRVNLEGLDQRDLAMALNEIRLLSSFRHPRIIRCYETFLDGPTHLCIVMEYCGFQDLARKIQRYRARGERVDERVVWVYLVQCLEALSALHALRVLHRDIKPANILLDKEGNAKLGDLNVSKCLDDETGEIHAVWGTLPYMAPEIWEGKPYGFASDLYSLGCTLFELTKLVPPFDGPTPLHLRRAVLKRQFQSDLATDTVYSHDLRHVILSRLLHHDPAQRLTADSLMQLPEVASRL----ELVRHKLPTDLPAALPLT--PSSLLLKHLNTPIARNSSEVREEGKSLEGSPVQLEEGGADTTRGSTNEEAQG--SASLTLGALPSLLPTLLPGPSYPPLSSAQALSPSASLPVSSSAPERSRETAHDHPRQACP 430
++ +F VLSK+G GAY V++V R +DN YA+K+V ++ L++++ ALNE+R+L+S HP +I E F D +LC++MEY +DL +KI RY+ +G+ + E +W Q + L+ALH L +LHRD+K AN+ L+ +G AKLGD+NVSK + E G +H GT Y +PE+W+ PY SD++SLGC L+E L PPF L V+K +F +S DL +++ +LL +P +R ++ L V E+ H + L +++ LT P S+ P A + R E SL SP + + + G N Q S+ SL+ LP SYP LSP LP+ + RE + HP ++ P
Sbjct: 2 SLTNFEVLSKIGNGAYSEVFKVRRLSDNKIYALKKVKMQNLNKKEKKNALNEVRILASINHPNVISYKEAFFDDSGNLCLIMEYADSEDLYQKIVRYQKKGKYLSEHFIWSVFTQITQGLNALHELNILHRDMKSANVFLNSDGTAKLGDMNVSKVM--EEGLLHTQTGTPYYASPEVWQDLPYNTKSDIWSLGCVLYETCTLKPPFRADDMQGLYEKVVKGEFT---PISMHFSKDLS-LVIRKLLQINPNKRPNCKQILGLNAVQKHFVNISEVREHNV---LLSSIRLTNDPDSM---SEGLPQANYNPRHRSEVPSLNSSPSKDLKSKGHRSFGQNNPSFQHLYSSPFKKSQKSSLIGIRLPKISYPI-----KLSP---LPI-----RKIRENSSSHPSKSLP 384
BLAST of EWM28941.1 vs. NCBI_GenBank
Match: gi|1134893403|gb|OMJ90642.1| (hypothetical protein SteCoe_6917 [Stentor coeruleus]) HSP 1 Score: 225.713 bits (574), Expect = 8.134e-66 Identity = 109/266 (40.98%), Postives = 166/266 (62.41%), Query Frame = 0
Query: 31 TIQDFHVLSKLGLGAYGSVYQVIRKADNHTYAIKRVNLEGLDQRDLAMALNEIRLLSSFRHPRIIRCYETFLDGPTHLCIVMEYCGFQDLARKIQRYRARGERVDERVVWVYLVQCLEALSALHALRVLHRDIKPANILLDKEGNAKLGDLNVSKCLDDETGEIHAVWGTLPYMAPEIWEGKPYGFASDLYSLGCTLFELTKLVPPFDGPTPLHLRRAVLKRQFQSDLATDTVYSHDLRHVILSRLLHHDPAQRLTADSLMQLPEV 296
++ +F +L+KLG GAY SVY+V R AD + YA+K+V ++ L++++ ALNE+R+L+S HP II E F D LC+VMEY DL +KI +Y+ RG+ + E+ +W +Q ++ L LH L++LHRDIK AN+ L+ +G AKLGD+NVSK D G ++ GT Y +PE+WE KPY SD++SLGC L+E L PPF L V+K ++ +S DL+ +I +LL + ++R + ++++P V
Sbjct: 2 SLNNFEILTKLGDGAYSSVYKVRRIADGNIYALKKVKMQNLNKKEKKNALNEVRILASINHPNIISYKEAFFDDSGSLCLVMEYADNGDLYQKIVKYQKRGKYLSEKFIWNTFIQIIKGLKTLHELKILHRDIKSANVFLNIDGTAKLGDMNVSKVTKD--GLLYTQTGTPYYASPEVWEDKPYNIKSDIWSLGCVLYEAITLYPPFRADDMQGLYDKVIKGEYS---LIQGHFSKDLKFII-KKLLQTESSKRPNCEQILKIPVV 261
BLAST of EWM28941.1 vs. NCBI_GenBank
Match: gi|1134885144|gb|OMJ82619.1| (hypothetical protein SteCoe_16670 [Stentor coeruleus]) HSP 1 Score: 222.246 bits (565), Expect = 1.899e-64 Identity = 109/266 (40.98%), Postives = 167/266 (62.78%), Query Frame = 0
Query: 31 TIQDFHVLSKLGLGAYGSVYQVIRKADNHTYAIKRVNLEGLDQRDLAMALNEIRLLSSFRHPRIIRCYETFLDGPTHLCIVMEYCGFQDLARKIQRYRARGERVDERVVWVYLVQCLEALSALHALRVLHRDIKPANILLDKEGNAKLGDLNVSKCLDDETGEIHAVWGTLPYMAPEIWEGKPYGFASDLYSLGCTLFELTKLVPPFDGPTPLHLRRAVLKRQFQSDLATDTVYSHDLRHVILSRLLHHDPAQRLTADSLMQLPEV 296
++ +F +L+KLG GAY SVY+V R AD + YA+K+V ++ L++++ ALNE+R+L+S HP II E F D LC+VMEY DL +KI +Y+ RG+ + E+ +W +Q + L ALH L +LHRD+K AN+ L+ +G AKLGD+NVSK D G ++ GT Y +PE+W+ KPY SD++SLGC L+E + L PPF L V+K ++ +S DL+ +I +LL +P++R + ++++P V
Sbjct: 2 SLSNFDILTKLGDGAYSSVYKVRRIADGNIYALKKVKMQNLNKKEKKNALNEVRILASINHPNIISYKEAFFDDSGSLCLVMEYADNGDLYQKIVKYQKRGKYLSEKFIWSTFIQITKGLKALHELNILHRDMKSANVFLNMDGTAKLGDMNVSKVTKD--GLLYTQTGTPYYASPEVWQDKPYNTKSDIWSLGCVLYEASALHPPFRADDMQGLYDKVIKGEYS---LIQGHFSKDLKFII-KQLLQIEPSKRPGCEQILRIPAV 261
BLAST of EWM28941.1 vs. NCBI_GenBank
Match: gi|1134891641|gb|OMJ88920.1| (hypothetical protein SteCoe_9025 [Stentor coeruleus]) HSP 1 Score: 217.624 bits (553), Expect = 1.119e-62 Identity = 110/270 (40.74%), Postives = 162/270 (60.00%), Query Frame = 0
Query: 34 DFHVLSKLGLGAYGSVYQVIRKADNHTYAIKRVNLEGLDQRDLAMALNEIRLLSSFRHPRIIRCYETFLDGPTHLCIVMEYCGFQDLARKIQRYRARGERVDERVVWVYLVQCLEALSALHALRVLHRDIKPANILLDKEGNAKLGDLNVSKCLDDETGEIHAVWGTLPYMAPEIWEGKPYGFASDLYSLGCTLFELTKLVPPFDGPTPLHLRRAVLKRQFQSDLATDTVYSHDLRHVILSRLLHHDPAQRLTADSLMQLPEVASRLELV 303
+F +LSKLG GAY +VY+V R AD YA+K+V ++ L++++ ALNE+R+L+S HP II E F D LC++MEY DL +KI R++ RG+ + E +W Q + L LH L +LHRD+K AN+ L+ G KLGD+NVSK D G ++ GT Y +PE+W+ KPY SD++SLGC L+E L PPF L V+K ++ YS DLR +I +LL +P++R + + ++++P V L +V
Sbjct: 5 NFEILSKLGDGAYSTVYKVKRIADGEIYALKKVKMQNLNKKEKKNALNEVRILASINHPNIISYKEAFFDDSGSLCLIMEYADNGDLYQKIVRHKKRGKYLSENFIWKTFTQITKGLKTLHELNILHRDMKSANVFLNMNGTVKLGDMNVSKVTKD--GLLYTQTGTPYYASPEVWQDKPYNTKSDIWSLGCVLYEAAALHPPFRADDMQGLFDKVVKGEYP---LIQPHYSRDLRFII-RQLLQIEPSKRPSCEQILRIPAVQRHLVMV 268
BLAST of EWM28941.1 vs. NCBI_GenBank
Match: gi|1134873427|gb|OMJ71548.1| (hypothetical protein SteCoe_30221 [Stentor coeruleus]) HSP 1 Score: 217.238 bits (552), Expect = 1.747e-62 Identity = 133/395 (33.67%), Postives = 211/395 (53.42%), Query Frame = 0
Query: 31 TIQDFHVLSKLGLGAYGSVYQVIRKADNHTYAIKRVNLEGLDQRDLAMALNEIRLLSSFRHPRIIRCYETFLDGPTHLCIVMEYCGFQDLARKIQRYRARGERVDERVVWVYLVQCLEALSALHALRVLHRDIKPANILLDKEGNAKLGDLNVSKCLDDETGEIHAVWGTLPYMAPEIWEGKPYGFASDLYSLGCTLFELTKLVPPFDGPTPLHLRRAVLKRQFQSDLATDTVYSHDLRHVILSRLLHHDPAQRLTADSLMQLPEVASRLELVRHKLPTDLPAALPLTPSSLLLKHLNTPIA--------RNSSEVREEGKSLEGSPVQLEEGGADTTRG--STNEEAQGSASLTLGALPSLLPTLLPGPSYPPLSSAQALSPSASLPVSSSAPE 415
++ +F +L+KLG GAY +VY+V R AD YA+K+V ++ L++++ ALNE+R+L+S H II E F D LC++MEY DL +KI R++ RG+ + E +W Q + L LH L +LHRD+K AN+ L+ G KLGD+NVSK +D G ++ GT Y +PE+W+ KPY SD++SLGC L+E L PPF L V+K ++ S YS DLR +I +LL +P++R + + ++++P V L ++ ++ +L L S ++ + N P + R+ SE+ + KS S ++LE + + T E + + + +L LP YP S QA+ + S P+
Sbjct: 2 SLTNFEILAKLGDGAYSTVYKVRRIADGEIYALKKVKMQNLNKKEKKNALNEVRILASINHSNIISYKEAFFDDSGSLCLIMEYADNGDLYQKIVRHQKRGKYLSENFIWKTFTQMTKGLKTLHELNILHRDMKSANVFLNMNGTVKLGDMNVSKVAED--GLLYTQTGTPYYASPEVWQDKPYNTKSDIWSLGCVLYEAAALHPPFRAEDMQGLFDKVVKGEYPS---IQPHYSRDLRFII-RQLLQIEPSKRPSCEQILRIPAVQRHL-IITTEISDNLSEKNHLRDSIKMVDYKNVPESLPSPKYSIRHHSEIPQLTKSPSKS-LRLESKRSYVFKNISYTQENKKAYKEILKKSYKAL---KLPKIKYPNKQSPQAIRKIRDIEEYYSMPK 385
BLAST of EWM28941.1 vs. NCBI_GenBank
Match: gi|145478159|ref|XP_001425102.1| (hypothetical protein [Paramecium tetraurelia strain d4-2] >gi|124392170|emb|CAK57704.1| unnamed protein product [Paramecium tetraurelia]) HSP 1 Score: 213.772 bits (543), Expect = 3.250e-61 Identity = 111/281 (39.50%), Postives = 174/281 (61.92%), Query Frame = 0
Query: 31 TIQDFHVLSKLGLGAYGSVYQVIRKADNHTYAIKRVNLEGLDQRDLAMALNEIRLLSSFRHPRIIRCYETFLDGPTH-LCIVMEYCGFQDLARKIQRYRARGERVDERVVWVYLVQCLEALSALHALRVLHRDIKPANILLDKEGNAKLGDLNVSKCLDDETGEIHAVWGTLPYMAPEIWEGKPYGFASDLYSLGCTLFELTKLVPPFDGPTPLHLRRAVLKRQFQSDLATDTVYSHDLRHVILSRLLHHDPAQRLTADSLMQLPEVASRLELVRHKLPTD 310
+++DF +LSKLG GAY SVY+V R D+ YA+K+V L+ L+ ++ A+NE+R+L+S +HP II E F+D ++ LCIVME+ DL +KI + G+ ++E+++W +Q + L ALH L++LHRD+K AN+ L + G+ KLGD+NVSK + G ++ GT Y +PE+W+ +PY SD++SLGC ++E+ L PPF + L + V+ R + ++ + YS DL + I S +L P R D L+Q P + R E + + TD
Sbjct: 2 SLKDFQLLSKLGEGAYSSVYKVKRLEDSQEYALKKVKLQNLNDKEKQNAMNEVRILASVKHPNIISYKEAFIDIQSNSLCIVMEFADGSDLYQKIVNSKKTGKLIEEQIIWNTFIQIVRGLKALHELKILHRDLKSANVFLYQNGDVKLGDMNVSKVA--KKGLLYTQTGTPFYASPEVWKDQPYDQKSDIWSLGCVVYEMAALKPPFQAESMEELYQRVI-RGYYPRISHN--YSQDLSNAIRS-MLQVKPHLRPNCDKLLQFPSLLKRQEELPKQEQTD 276 The following BLAST results are available for this feature:
BLAST of EWM28941.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
|