EWM29038.1, cds1641 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM29038.1 vs. NCBI_GenBank
Match: gi|585111556|gb|EWM29038.1| (hypothetical protein Naga_100071g14 [Nannochloropsis gaditana]) HSP 1 Score: 1278.08 bits (3306), Expect = 0.000e+0 Identity = 652/652 (100.00%), Postives = 652/652 (100.00%), Query Frame = 0 Query: 1 MPPAASATFRASSSGGTTAVETSGMADEERAPLHRRLHVLQSKLALLGYKDVVGTDSIELVEKLFDDLVATSESYERLQHREDLLSHDLALSQDQILPLRKTIARLTRENNDLHSQVLHAVRAVDKKEVEWKREMAAVQGDLVATQDLLQEKEMACRAERRKVRQLQVQAKRLRAAFSGEDRGGSRTTTSFPFGEEIAGASEEGAGLDDAEEEGEEEEEEEEKEDVGQGSTFLAMERRVQDQELEAVMRDSVREKDAYHEALARLEVARAELARKEEQVEQFKSLFDQLHTGRDQINVRLQQSYAEITAAEEREREAKDKAQRLDRRVAEKEEEVEKLQRLIREMEEERQALQGRLEQAEETETVWKREQAQYERTLRRMEGDLEEEGRQREAAREALAGKEKEGRVLERKMAGLEMEAGAAKKMVHSRLLEIRALRDDLMIMTREAQATQGQLQRAEREREEYRQVVEESRIRAEEAEGSLRGMEAERNDLLGSYKAAQEEVSRLTYNLNQLGRAQREQQVALGQTRAALLSMEKDLVQERREKAQTLAHAAEMSAEGERGRSGGFQQQQSQMPTLREYERQPRQDLEARQQPQQRLSELYPAEASEIMGEAEGGGGSNSENDISTSSLEEFLASRDAGEGQDRDDSSTSA 652 MPPAASATFRASSSGGTTAVETSGMADEERAPLHRRLHVLQSKLALLGYKDVVGTDSIELVEKLFDDLVATSESYERLQHREDLLSHDLALSQDQILPLRKTIARLTRENNDLHSQVLHAVRAVDKKEVEWKREMAAVQGDLVATQDLLQEKEMACRAERRKVRQLQVQAKRLRAAFSGEDRGGSRTTTSFPFGEEIAGASEEGAGLDDAEEEGEEEEEEEEKEDVGQGSTFLAMERRVQDQELEAVMRDSVREKDAYHEALARLEVARAELARKEEQVEQFKSLFDQLHTGRDQINVRLQQSYAEITAAEEREREAKDKAQRLDRRVAEKEEEVEKLQRLIREMEEERQALQGRLEQAEETETVWKREQAQYERTLRRMEGDLEEEGRQREAAREALAGKEKEGRVLERKMAGLEMEAGAAKKMVHSRLLEIRALRDDLMIMTREAQATQGQLQRAEREREEYRQVVEESRIRAEEAEGSLRGMEAERNDLLGSYKAAQEEVSRLTYNLNQLGRAQREQQVALGQTRAALLSMEKDLVQERREKAQTLAHAAEMSAEGERGRSGGFQQQQSQMPTLREYERQPRQDLEARQQPQQRLSELYPAEASEIMGEAEGGGGSNSENDISTSSLEEFLASRDAGEGQDRDDSSTSA Sbjct: 1 MPPAASATFRASSSGGTTAVETSGMADEERAPLHRRLHVLQSKLALLGYKDVVGTDSIELVEKLFDDLVATSESYERLQHREDLLSHDLALSQDQILPLRKTIARLTRENNDLHSQVLHAVRAVDKKEVEWKREMAAVQGDLVATQDLLQEKEMACRAERRKVRQLQVQAKRLRAAFSGEDRGGSRTTTSFPFGEEIAGASEEGAGLDDAEEEGEEEEEEEEKEDVGQGSTFLAMERRVQDQELEAVMRDSVREKDAYHEALARLEVARAELARKEEQVEQFKSLFDQLHTGRDQINVRLQQSYAEITAAEEREREAKDKAQRLDRRVAEKEEEVEKLQRLIREMEEERQALQGRLEQAEETETVWKREQAQYERTLRRMEGDLEEEGRQREAAREALAGKEKEGRVLERKMAGLEMEAGAAKKMVHSRLLEIRALRDDLMIMTREAQATQGQLQRAEREREEYRQVVEESRIRAEEAEGSLRGMEAERNDLLGSYKAAQEEVSRLTYNLNQLGRAQREQQVALGQTRAALLSMEKDLVQERREKAQTLAHAAEMSAEGERGRSGGFQQQQSQMPTLREYERQPRQDLEARQQPQQRLSELYPAEASEIMGEAEGGGGSNSENDISTSSLEEFLASRDAGEGQDRDDSSTSA 652
BLAST of EWM29038.1 vs. NCBI_GenBank
Match: gi|299117453|emb|CBN73956.1| (basal body protein [Ectocarpus siliculosus]) HSP 1 Score: 87.4261 bits (215), Expect = 3.939e-14 Identity = 44/89 (49.44%), Postives = 61/89 (68.54%), Query Frame = 0 Query: 32 PLHRRLHVLQSKLALLGYKDVVGTDSIELVEKLFDDLVATSESYERLQHREDLLSHDLALSQDQILPLRKTIARLTRENNDLHSQVLHA 120 + +RL +++L L Y D +S+ LVE+LF+DLV T+ESYE LQ RED + DLALS+ Q+ PL+K ARL R+NN LH +V+ A Sbjct: 8 SVQKRLSDQRARLLALDYHDPFTAESLALVERLFEDLVTTTESYEDLQQREDQTAADLALSRAQLFPLKKENARLLRDNNLLHLKVIKA 96
BLAST of EWM29038.1 vs. NCBI_GenBank
Match: gi|570942448|gb|ETP07705.1| (hypothetical protein F441_16147 [Phytophthora parasitica CJ01A1]) HSP 1 Score: 70.0922 bits (170), Expect = 1.199e-8 Identity = 48/138 (34.78%), Postives = 79/138 (57.25%), Query Frame = 0 Query: 40 LQSKLALLGYKDVVGTDSIELVEKLFDDLVATSESYERLQHREDLLSHD-LALSQDQILPLRKTIARLTRENNDLHSQVLHAVRAVDKKEVEWKREMAAVQGDLVATQDLLQEKEMACRAERRKVRQLQVQAKRLRAA 176 LQS+L + Y + G +S LV +L DL+ SE+ E + + + D L LSQ +LPLRK A+LT+ENN LH +++H A+ ++E + ++ +Q D+ Q L +K C + ++V +LQ Q +R+ A Sbjct: 21 LQSQLRAMSYSEPFGVESARLVRRLLTDLLTASEARETAEKKLEKAQRDALELSQI-LLPLRKENAQLTKENNSLHLEIIHQEEAITEREKACELQLEGLQDDVKKLQFLNTQKTQQCTKKEQEVAKLQAQLERVLAT 157
BLAST of EWM29038.1 vs. NCBI_GenBank
Match: gi|675205119|ref|XP_008911444.1| (hypothetical protein PPTG_16358 [Phytophthora parasitica INRA-310] >gi|568088468|gb|ETN03328.1| hypothetical protein PPTG_16358 [Phytophthora parasitica INRA-310]) HSP 1 Score: 68.1662 bits (165), Expect = 4.514e-8 Identity = 47/138 (34.06%), Postives = 79/138 (57.25%), Query Frame = 0 Query: 40 LQSKLALLGYKDVVGTDSIELVEKLFDDLVATSESYERLQHREDLLSHD-LALSQDQILPLRKTIARLTRENNDLHSQVLHAVRAVDKKEVEWKREMAAVQGDLVATQDLLQEKEMACRAERRKVRQLQVQAKRLRAA 176 LQS+L + Y + G +S LV +L DL+ SE+ E + + + D L LSQ +LPLRK A+LT+ENN LH +++H A+ ++E + ++ ++ D+ Q L +K C + ++V +LQ Q +R+ A Sbjct: 21 LQSQLRAMSYSEPFGVESARLVRRLLTDLLTASEARETAEKKLEKAQRDALELSQI-LLPLRKENAQLTKENNSLHLEIIHQEEAITEREKACELQLEGLRDDVKKLQFLNTQKTQQCTKKEQEVAKLQAQLERVLAT 157
BLAST of EWM29038.1 vs. NCBI_GenBank
Match: gi|566014901|gb|ETI37812.1| (hypothetical protein F443_16327 [Phytophthora parasitica P1569]) HSP 1 Score: 67.781 bits (164), Expect = 4.834e-8 Identity = 47/138 (34.06%), Postives = 79/138 (57.25%), Query Frame = 0 Query: 40 LQSKLALLGYKDVVGTDSIELVEKLFDDLVATSESYERLQHREDLLSHD-LALSQDQILPLRKTIARLTRENNDLHSQVLHAVRAVDKKEVEWKREMAAVQGDLVATQDLLQEKEMACRAERRKVRQLQVQAKRLRAA 176 LQS+L + Y + G +S LV +L DL+ SE+ E + + + D L LSQ +LPLRK A+LT+ENN LH +++H A+ ++E + ++ ++ D+ Q L +K C + ++V +LQ Q +R+ A Sbjct: 21 LQSQLRAMSYSEPFGVESARLVRRLLTDLLTASEARETAEKKLEKAQRDALELSQI-LLPLRKENAQLTKENNSLHLEIIHQEEAITEREKACELQLEGLRDDVKKLQFLNTQKTQQCTKKEQEVAKLQAQLERVLAT 157
BLAST of EWM29038.1 vs. NCBI_GenBank
Match: gi|568040392|gb|ETM37850.1| (hypothetical protein L914_15724 [Phytophthora parasitica]) HSP 1 Score: 67.781 bits (164), Expect = 4.876e-8 Identity = 47/138 (34.06%), Postives = 79/138 (57.25%), Query Frame = 0 Query: 40 LQSKLALLGYKDVVGTDSIELVEKLFDDLVATSESYERLQHREDLLSHD-LALSQDQILPLRKTIARLTRENNDLHSQVLHAVRAVDKKEVEWKREMAAVQGDLVATQDLLQEKEMACRAERRKVRQLQVQAKRLRAA 176 LQS+L + Y + G +S LV +L DL+ SE+ E + + + D L LSQ +LPLRK A+LT+ENN LH +++H A+ ++E + ++ ++ D+ Q L +K C + ++V +LQ Q +R+ A Sbjct: 21 LQSQLRAMSYSEPFGVESARLVRRLLTDLLTASEARETAEKKLEKAQRDALELSQI-LLPLRKENAQLTKENNSLHLEIIHQEEAITEREKACELQLEGLRDDVKKLQFLNTQKTQQCTKKEQEVAKLQAQLERVLAT 157
BLAST of EWM29038.1 vs. NCBI_GenBank
Match: gi|568010519|gb|ETL84707.1| (hypothetical protein L917_15573 [Phytophthora parasitica]) HSP 1 Score: 67.781 bits (164), Expect = 4.876e-8 Identity = 47/138 (34.06%), Postives = 79/138 (57.25%), Query Frame = 0 Query: 40 LQSKLALLGYKDVVGTDSIELVEKLFDDLVATSESYERLQHREDLLSHD-LALSQDQILPLRKTIARLTRENNDLHSQVLHAVRAVDKKEVEWKREMAAVQGDLVATQDLLQEKEMACRAERRKVRQLQVQAKRLRAA 176 LQS+L + Y + G +S LV +L DL+ SE+ E + + + D L LSQ +LPLRK A+LT+ENN LH +++H A+ ++E + ++ ++ D+ Q L +K C + ++V +LQ Q +R+ A Sbjct: 21 LQSQLRAMSYSEPFGVESARLVRRLLTDLLTASEARETAEKKLEKAQRDALELSQI-LLPLRKENAQLTKENNSLHLEIIHQEEAITEREKACELQLEGLRDDVKKLQFLNTQKTQQCTKKEQEVAKLQAQLERVLAT 157
BLAST of EWM29038.1 vs. NCBI_GenBank
Match: gi|567952343|gb|ETK78021.1| (hypothetical protein L915_15877 [Phytophthora parasitica] >gi|567981003|gb|ETL31451.1| hypothetical protein L916_15776 [Phytophthora parasitica] >gi|570318633|gb|ETO66581.1| hypothetical protein F444_16317 [Phytophthora parasitica P1976]) HSP 1 Score: 67.781 bits (164), Expect = 5.266e-8 Identity = 47/138 (34.06%), Postives = 79/138 (57.25%), Query Frame = 0 Query: 40 LQSKLALLGYKDVVGTDSIELVEKLFDDLVATSESYERLQHREDLLSHD-LALSQDQILPLRKTIARLTRENNDLHSQVLHAVRAVDKKEVEWKREMAAVQGDLVATQDLLQEKEMACRAERRKVRQLQVQAKRLRAA 176 LQS+L + Y + G +S LV +L DL+ SE+ E + + + D L LSQ +LPLRK A+LT+ENN LH +++H A+ ++E + ++ ++ D+ Q L +K C + ++V +LQ Q +R+ A Sbjct: 21 LQSQLRAMSYSEPFGVESARLVRRLLTDLLTASEARETAEKKLEKAQRDALELSQI-LLPLRKENAQLTKENNSLHLEIIHQEEAITEREKACELQLEGLRDDVKKLQFLNTQKTQQCTKKEQEVAKLQAQLERVLAT 157
BLAST of EWM29038.1 vs. NCBI_GenBank
Match: gi|570972983|gb|ETP35738.1| (hypothetical protein F442_16177 [Phytophthora parasitica P10297]) HSP 1 Score: 66.2402 bits (160), Expect = 1.507e-7 Identity = 46/138 (33.33%), Postives = 79/138 (57.25%), Query Frame = 0 Query: 40 LQSKLALLGYKDVVGTDSIELVEKLFDDLVATSESYERLQHREDLLSHD-LALSQDQILPLRKTIARLTRENNDLHSQVLHAVRAVDKKEVEWKREMAAVQGDLVATQDLLQEKEMACRAERRKVRQLQVQAKRLRAA 176 LQS+L + + + G +S LV +L DL+ SE+ E + + + D L LSQ +LPLRK A+LT+ENN LH +++H A+ ++E + ++ ++ D+ Q L +K C + ++V +LQ Q +R+ A Sbjct: 21 LQSQLRAMSFSEPFGVESARLVRRLLTDLLTASEARETAEKKLEKAQRDALELSQI-LLPLRKENAQLTKENNSLHLEIIHQEEAITEREKACELQLEGLRDDVKKLQFLNTQKTQQCTKKEQEVAKLQAQLERVLAT 157 The following BLAST results are available for this feature:
BLAST of EWM29038.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 9
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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