EWM29085.1, cds1608 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM29085.1 vs. NCBI_GenBank
Match: gi|585111604|gb|EWM29085.1| (Prefoldin [Nannochloropsis gaditana]) HSP 1 Score: 295.049 bits (754), Expect = 4.065e-101 Identity = 145/145 (100.00%), Postives = 145/145 (100.00%), Query Frame = 0
Query: 1 MSTTGVMREVNPSQDKGKAKTPDEAPDVEVRKEDQEMINEFGRLNNQYLELDEDLAYLKEQLEKLDDAVTELMVGVGGPVRLSLGEAFMDVSEDYATEHCERKQEQLQAKVEELGREKGKIATRQMELKKVLYGRFGSSINLENS 145
MSTTGVMREVNPSQDKGKAKTPDEAPDVEVRKEDQEMINEFGRLNNQYLELDEDLAYLKEQLEKLDDAVTELMVGVGGPVRLSLGEAFMDVSEDYATEHCERKQEQLQAKVEELGREKGKIATRQMELKKVLYGRFGSSINLENS
Sbjct: 1 MSTTGVMREVNPSQDKGKAKTPDEAPDVEVRKEDQEMINEFGRLNNQYLELDEDLAYLKEQLEKLDDAVTELMVGVGGPVRLSLGEAFMDVSEDYATEHCERKQEQLQAKVEELGREKGKIATRQMELKKVLYGRFGSSINLENS 145
BLAST of EWM29085.1 vs. NCBI_GenBank
Match: gi|676387403|ref|XP_009036980.1| (hypothetical protein AURANDRAFT_26407 [Aureococcus anophagefferens] >gi|323452375|gb|EGB08249.1| hypothetical protein AURANDRAFT_26407 [Aureococcus anophagefferens]) HSP 1 Score: 129.413 bits (324), Expect = 4.908e-36 Identity = 71/118 (60.17%), Postives = 88/118 (74.58%), Query Frame = 0
Query: 27 DVEVRKEDQEMINEFGRLNNQYLELDEDLAYLKEQLEKLDDAVTELMVGVGGPVRLSLG-EAFMDVSEDYATEHCERKQEQLQAKVEELGREKGKIATRQMELKKVLYGRFGSSINLE 143
DVEVRKEDQ +INEFGRLN + E D A L++ LE+ DDA TEL +G G V+L LG E+F+DV ED+ATE+CE +QE++QA+++ E KIA RQ ELK VLYGRFGS INLE
Sbjct: 3 DVEVRKEDQLLINEFGRLNAKMHERKADRAVLQKSLEEFDDATTELAMGDGDDVKLMLGGESFVDVGEDFATEYCEAEQEKIQAEMDHEDAEIEKIAARQKELKVVLYGRFGSQINLE 120
BLAST of EWM29085.1 vs. NCBI_GenBank
Match: gi|669143670|ref|XP_008607397.1| (hypothetical protein SDRG_03541 [Saprolegnia diclina VS20] >gi|813102515|ref|XP_012193843.1| hypothetical protein SPRG_00354 [Saprolegnia parasitica CBS 223.65] >gi|530741094|gb|EQC39336.1| hypothetical protein SDRG_03541 [Saprolegnia diclina VS20] >gi|641541762|gb|KDO35507.1| hypothetical protein SPRG_00354 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 125.946 bits (315), Expect = 1.570e-34 Identity = 64/124 (51.61%), Postives = 92/124 (74.19%), Query Frame = 0
Query: 21 TPDEAPDVEVRKEDQEMINEFGRLNNQYLELDEDLAYLKEQLEKLDDAVTELMVGVGGPVRLSLGEAFMDVSEDYATEHCERKQEQLQAKVEELGREKGKIATRQMELKKVLYGRFGSSINLEN 144
P + +V+VRKEDQ+ INEFGR N++ ++ +++ LK++LE LDDA TE+M+G G V+L +GE+F+ VSE+YA E+ E + E+ QAKVE+L E+ + RQ LKKVLY RFG+SINLE+
Sbjct: 3 APQQEVEVDVRKEDQDRINEFGRNNSRLADVRDEVKALKDKLETLDDANTEIMMGEGDNVQLFIGESFVQVSEEYAQEYLEAQTEKTQAKVEKLQAEEASLEARQAALKKVLYARFGTSINLED 126
BLAST of EWM29085.1 vs. NCBI_GenBank
Match: gi|224004486|ref|XP_002295894.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|209585926|gb|ACI64611.1| predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 125.561 bits (314), Expect = 2.204e-34 Identity = 69/132 (52.27%), Postives = 91/132 (68.94%), Query Frame = 0
Query: 12 PSQDKGKAKTPDEAPDVEVRKEDQEMINEFGRLNNQYLELDEDLAYLKEQLEKLDDAVTELMVGVGGPVRLSLGEAFMDVSEDYATEHCERKQEQLQAKVEELGREKGKIATRQMELKKVLYGRFGSSINLE 143
P D G +E D EVR+EDQ+ INEFG+LN + E+ ++A LK+ LEK+DDA TELM+G G V L LGEA + +ED ATE CE + E+ QA +++L +E+ I +Q LKKVLYGRFG+SINLE
Sbjct: 2 PEAD-GMILAKEEENDAEVRREDQDKINEFGQLNARLYEVRSEIARLKKLLEKIDDASTELMMGNGDKVMLRLGEAMFEATEDEATEFCEAEMEKHQAVLDDLDKEEADIVEKQAALKKVLYGRFGNSINLE 132
BLAST of EWM29085.1 vs. NCBI_GenBank
Match: gi|219130366|ref|XP_002185338.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217403253|gb|EEC43207.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 125.176 bits (313), Expect = 2.740e-34 Identity = 67/125 (53.60%), Postives = 88/125 (70.40%), Query Frame = 0
Query: 21 TPDEAPDVEVRKEDQEMINEFGRLNNQYLELDEDLAYLKEQLEKLDDAVTELMVGVGGPVRLSLGEAFMDVSEDYATEHCERKQEQLQAKVEELGREKGKIATRQMELKKVLYGRFGSSINLENS 145
+E D EVR+ DQ+ IN+F RLN + E+ + A L++QLE+LDDA TELM+G G V + LGEAF+ SED ATE CE + E++Q++VE L E+ I Q ELKK+LYGRFG SINLE+S
Sbjct: 3 AAEEENDNEVRRIDQQNINKFARLNARLHEVRAERANLQKQLERLDDASTELMMGSGDTVWMMLGEAFLATSEDDATEFCEGQVEKMQSRVERLKGEETTIVDEQAELKKILYGRFGKSINLEDS 127
BLAST of EWM29085.1 vs. NCBI_GenBank
Match: gi|673028872|ref|XP_008868397.1| (hypothetical protein H310_05448 [Aphanomyces invadans] >gi|574476014|gb|ETW03013.1| hypothetical protein H310_05448 [Aphanomyces invadans]) HSP 1 Score: 120.939 bits (302), Expect = 1.194e-32 Identity = 64/124 (51.61%), Postives = 90/124 (72.58%), Query Frame = 0
Query: 21 TPDEAPDVEVRKEDQEMINEFGRLNNQYLELDEDLAYLKEQLEKLDDAVTELMVGVGGPVRLSLGEAFMDVSEDYATEHCERKQEQLQAKVEELGREKGKIATRQMELKKVLYGRFGSSINLEN 144
P + +V+VRKEDQE INEFGR N++ +L ++L LKE+LE LDDA TE+M+G G V+L +GE+F++VSE+ A E+ E + E+ V +L E+ K+ +RQ LKKVLY RFG+SINLE+
Sbjct: 3 APQQEVEVDVRKEDQERINEFGRNNSRLADLRDELKALKEKLETLDDANTEIMMGEGNNVQLFIGESFVEVSEEVAQEYLEAQTEKANDAVAKLAAEETKLESRQDALKKVLYARFGTSINLED 126
BLAST of EWM29085.1 vs. NCBI_GenBank
Match: gi|298711393|emb|CBJ32536.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 120.553 bits (301), Expect = 1.438e-32 Identity = 61/111 (54.95%), Postives = 84/111 (75.68%), Query Frame = 0
Query: 33 EDQEMINEFGRLNNQYLELDEDLAYLKEQLEKLDDAVTELMVGVGGPVRLSLGEAFMDVSEDYATEHCERKQEQLQAKVEELGREKGKIATRQMELKKVLYGRFGSSINLE 143
EDQ+ INEFGRLN + LE+ +D +++K+ L+KLDDA TELM G G V L LG++FM+ E++AT++CER+QE+ Q+K+++L E+ I RQ LKK LY RFGSSI LE
Sbjct: 9 EDQQKINEFGRLNTRLLEIRDDKSHIKDILDKLDDATTELMTGEGDSVMLMLGDSFMECEEEFATDYCERQQEKRQSKLDDLVDEEKTILLRQGVLKKELYARFGSSIQLE 119
BLAST of EWM29085.1 vs. NCBI_GenBank
Match: gi|698820041|ref|XP_009843049.1| (hypothetical protein H257_16351 [Aphanomyces astaci] >gi|574101932|gb|ETV67490.1| hypothetical protein H257_16351 [Aphanomyces astaci]) HSP 1 Score: 120.168 bits (300), Expect = 2.400e-32 Identity = 63/124 (50.81%), Postives = 90/124 (72.58%), Query Frame = 0
Query: 21 TPDEAPDVEVRKEDQEMINEFGRLNNQYLELDEDLAYLKEQLEKLDDAVTELMVGVGGPVRLSLGEAFMDVSEDYATEHCERKQEQLQAKVEELGREKGKIATRQMELKKVLYGRFGSSINLEN 144
P + +V+VRKEDQ+ INEFGR N++ +L ++L LKE+LE LDDA TE+M+G G V+L +GE+F++VSE+ A E+ E + ++ A V +L E+ K+ RQ LKKVLY RFG+SINLE+
Sbjct: 3 APQQEVEVDVRKEDQDRINEFGRNNSRLADLRDELKALKEKLETLDDANTEIMMGAGDNVQLFIGESFVEVSEEDAQEYLEAQTDKANAVVSKLNAEESKLEARQDALKKVLYARFGTSINLED 126
BLAST of EWM29085.1 vs. NCBI_GenBank
Match: gi|1173949611|gb|OQR97630.1| (hypothetical protein ACHHYP_10177 [Achlya hypogyna]) HSP 1 Score: 120.168 bits (300), Expect = 2.889e-32 Identity = 61/124 (49.19%), Postives = 91/124 (73.39%), Query Frame = 0
Query: 21 TPDEAPDVEVRKEDQEMINEFGRLNNQYLELDEDLAYLKEQLEKLDDAVTELMVGVGGPVRLSLGEAFMDVSEDYATEHCERKQEQLQAKVEELGREKGKIATRQMELKKVLYGRFGSSINLEN 144
P + +V+VRKEDQ+ INEFGR N++ ++ +++ LK++LE LDDA TE+M+G G V+L +GE+F+ VSE+YA E+ E + E+ Q K+++L E+ + RQ LKKVLY RFG+SINLE+
Sbjct: 3 APQQEVEVDVRKEDQDRINEFGRNNSRLADVRDEVKALKDKLETLDDANTEIMMGEGDNVQLFIGESFVQVSEEYAQEYLEAQTEKTQDKIKKLEAEEATLEARQSALKKVLYARFGTSINLED 126
BLAST of EWM29085.1 vs. NCBI_GenBank
Match: gi|695425533|ref|XP_009529201.1| (hypothetical protein PHYSODRAFT_315748 [Phytophthora sojae] >gi|348675634|gb|EGZ15452.1| hypothetical protein PHYSODRAFT_315748 [Phytophthora sojae]) HSP 1 Score: 115.161 bits (287), Expect = 2.337e-30 Identity = 61/119 (51.26%), Postives = 86/119 (72.27%), Query Frame = 0
Query: 27 DVEVRKEDQEMINEFGRLNNQYLELDEDLAYLKEQLEKLDDAVTELMVGVGGPVRLSLGEAFMDVSEDYATEHCERKQEQLQAKVEELGREKGKIATRQMELKKVLYGRFGSSINLENS 145
+ +VRKEDQ INEFGR N E+ E LK++L+ LDDA T+LM+G G V+L +GE+F++ SED+A E+ E++ E+ A++++L E+ K+ RQ LKKVLYGRFG SINLE+S
Sbjct: 9 EADVRKEDQLRINEFGRNNASLHEIREQKKALKDKLDTLDDANTDLMMGEGDNVQLFIGESFVEASEDFAQEYLEKRVEEANAELKKLQAEESKLEARQAALKKVLYGRFGQSINLEDS 127 The following BLAST results are available for this feature:
BLAST of EWM29085.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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