rna1514, rna1514 (mRNA) Nannochloropsis gaditana

Overview
Namerna1514
Unique Namerna1514
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1254
Alignment locationCM002457.1:822364..825515 -

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Properties
Property NameValue
Productsepiapterin reductase
Orig transcript idgnl|cribi|Naga_100007g61.6451.mrna
Orig protein idgnl|cribi|Naga_100007g61.6451
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002457.1supercontigCM002457.1:822364..825515 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100007g61gene1460Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM29124.1cds1511Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna1514rna1514-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna1514 ID=rna1514|Name=rna1514|organism=Nannochloropsis gaditana|type=mRNA|length=1254bp
ATGTATGATGCTGATGTCGGCGAAAATGTTAAAAATTGCGCTGAAGGCGG
CCCGAGCCACGTCCTTAAATCGGTCTCTTCCCACGTCAAGGAAGGCCAAC
GAAAGGCATCAACATCCCCTGTTAGGCCAGATGCTTCAAGAAGTGAAAAT
TGCGTCGACGGAAAATCACACGCCAATTTTGATATCGGTAGAAGTGGGAC
ACATGTTGAAAAGCCGAATGCTAGTATAGATAGTGTTCCTGATAAGGACC
AGCACAGCGTGGGGATTCTTTTTTTAGCTCACGATGGAGTGACGAATCCC
CTATTATGGGAAAAATGGCGAGCAAGTGATAAAGTATTTGCGTCTCGTAT
TCGCTTCTTCGTCTTCCGCAACACAAAAATCAGCCATCCCAGCTTCTTTA
CAACTAAGTATGACTTAAAACTTCGGCTTCGCACAAAATGGTGCTCGTCA
AGTATCGTGCATGCAACTATTAAATCTCTTCAGGCGGTGCTTGAAGGAGA
TACATCGGTGGGCATGATATACATCGTATCCGGGTATGACATACCCATTC
AGCCACCGTCTGCCCTCTTTACAACTCGATCTGTGATAACGGAGGGAGTG
TTCAAGAATGTAGTACCTTTTAGGAGCGTAATAGCCTTCACGCCCGGAGA
AGACATGGACTTGAAAGAAGCGTCTGGGTGGGGCAAACGGAATGAGAAAC
TGCGGCAAAGCGCTGTGAGTCATGTGCAATGGTGTGGATTGACCCGGGGC
CACGCCCGCTTGATTGTTGCGTACCCGGACCTCAAGCAGCTCTTCAAACT
CGGCAACAAAATATCCAGCGCTTGCTGTCCGGATGAATGGGTCCTAGGGA
CGGCTCTCTTGCTCCAGTTGCGGTGCCAGGCAACTCCTACAAAAGCAAAC
AAGTGTGGAACAAACGGGCACGATGATGGAAAGGAATACTGGCGTGGAGC
GGAAGGCGTCAGGCATAGTCCGAGAGAGGCGGACGTACCCACCACTACGG
CCTCAGATACAAGTATTCCCAATCCATCCGGGTGTTTGGAGTCGTTCGAT
GTGATAGACTGGCCGATTACGGATCAATACCGGAGTGGGCGGCAGGCGCA
GTCGCCTCTTCTCTGGGAAGATATGGAGGCTACCTCGCACAAGCTCCTCT
CGCTCCTTGCTCAGCACGGGTGTCAGGGTATGCCACAAAAATCAAAGAGC
AAAGGTCAACTGACATTGCAGTGGCGCCCAACTCGGAAATCCACTCCTGC
GTGA
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protein sequence of rna1514

>rna1514-protein ID=rna1514-protein|Name=rna1514|organism=Nannochloropsis gaditana|type=polypeptide|length=303bp
MSATSGTRFLVFITGASRGFGRCLALEAARKWGPAVDMHLIARNAEALTA
VKRDIEASLSDQSKIGVRVWTWPFDLGNLETLEPNFARIFATVDEFSAEQ
ESTAMIMHKYGNVYLFNNAGSVGPIAYAKDLCTDLPALRQSLDLNLTSSI
LITSLFLRRFCTLSSPSNKVPALFIINISSMAAIQPFHSWGVYCAGKAAR
DMFLQVVAQEHQGEGSARGEGSMAGGMSVHLKTLNYAPGPLDTDMQIELR
ESESIHPPTREWSEKAFREGWLVRPEESASKCLRILTKNDFKSGVHIDYY
DDM
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mRNA from alignment at CM002457.1:822364..825515-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna1514 ID=rna1514|Name=rna1514|organism=Nannochloropsis gaditana|type=mRNA|length=3152bp|location=Sequence derived from alignment at CM002457.1:822364..825515- (Nannochloropsis gaditana)
GTAGGTTGGCTTTAATTCACCATTAATCTCTATAAACAAACACCAGAGGC
CTCAAGATCCTCTTCATAATGTCTGCGACATCAGGCACTCGATTCCTGGT
GTTTATTACGGGTGCAAGCCGTGGTTTTGGAAGATGCTTAGCCCTTGAAG
CTGCCCGCAAATGGGGCCCTGCTGTGGACATGCATCTTATTGCACGAAAC
GCGGAGGCACTCACGGCAGTGAAACGTGATATTGAGGCATCTTTATCAGA
CCAAAGTAAAATTGGTGTACGTGTATGGACATGGCCTTTTGATTTGGGAA
ACCTAGAGACGTTGGAGCCCAATTTTGCTAGAATTTTTGCCACCGTTGAC
GAATTTTCTGCAGAGCAAGAATCGACAGCAATGATAATGCATAAGTATGG
CAATGTCTACCTTTTCAATAACGCAGGATCAGTGGGACCAATAGCGTATG
CGAAAGATCTTTGCACTGACTTGCCGGCCCTGCGTCAGTCTTTGGATCTG
AACTTGACATCGTCAATCTTGATAACTTCCCTCTTCCTTCGCCGTTTTTG
CACCTTATCTTCGCCTTCAAACAAAGTTCCTGCTTTATTCATCATCAACA
TTTCCTCAATGGCTGCCATTCAACCTTTTCATTCGTGGGGTGTGTACTGC
GCGGGCAAAGCTGCGAGAGACATGTTTCTGCAAGTGGTCGCACAGGAGCA
CCAGGGAGAAGGAAGTGCGCGGGGGGAAGGTTCGATGGCAGGCGGAATGT
CTGTGCACTTAAAAACTCTCAACTATGCACCTGGCCCTCTCGACACAGAT
ATGCAGATAGAGCTGCGAGAGAGCGAATCGATCCATCCGCCGACGCGTGA
GTGGTCAGAGAAGGCCTTCAGAGAGGGCTGGCTTGTGAGGCCGGAGGAAT
CGGCTTCTAAATGCCTTCGTATCTTGACTAAGAACGACTTTAAGAGTGGG
GTGCACATTGACTATTACGATGATATGTAGAGAGCCTAAGCGATTAGCGT
GTCGCGACAAAATTTGAATGTGTGCATTAGAACAATTTGGTGGCACATCC
TTCATTTATCTAGATTTGCGGTTACAGTAGTAGAGTAGACAAGTGGGACA
TTTGCTAAGCCATCAACACCCAATTGATGGTCTGAGCTTTCCATCGTAGC
CGCCTCACGCGTCATCTATCGCATCGAAACGCGTCGGCTTTCCTCCTACC
TTGAGCGACAGTCCTCACAGCAGCTCGTGCCACTTAGTCCTTCCCGGCAC
CCTTTCTTCCTGTTGAACATCTCTCTCACACGGTGGCCCAGGGAGGCGAC
CAACCTCGAAGAAATACGGCGGGGCCTGGCGAGCGGCGTGGCAGGTATGC
CACTTGCACTCGTGTCGTCGTTCCCATCCTCCGAGTCGGTCACGCAGGAG
TGGATTTCCGAGTTGGGCGCCACTGCAATGTCAGTTGACCTTTGCTCTTT
GATTTTTGTGGCATACCCTGACACCCGTGCTGAGCAAGGAGCGAGAGGAG
CTGTGGCGCGTTCAACGTCCGTGATAAGTCGGAACAAAGCCCCGATCTCT
GCCTCCTTCAACGGACCCACTTTGCGGAAAAAGAGATTTCCTTCTTGACG
AGAAACGCGCTCAATCACTGTCGCCAGAGTAAATGACCGATAGGTCCTAG
GCGGCGCCCACAAGACCTTGTGCGAGGTAGCCTCCATATCTTCCCAGAGA
AGAGGCGACTGCGCCTGCCGCCCACTCCGGTATTGATCCGTAATCGGCCA
GTCTATCACATCGAACGACTCCAAACACCCGGATGGATTGGGAATACTTG
TATCTGAGGCCGTAGTGGTGGGTACGTCCGCCTCTCTCGGACTATGCCTG
ACGCCTTCCGCTCCACGCCAGTATTCCTTTCCATCATCGTGCCCGTTTGT
TCCACACTTGTTTGCTTTTGTAGGAGTTGCCTGGCACCGCAACTGGAGCA
AGAGAGCCGTCCCTAGGACCCATTCATCCGGACAGCAAGCGCTGGATATT
TTGTTGCCGAGTTTGAAGAGCTGCTTGAGGTCCGGGTACGCAACAATCAA
GCGGGCGTGGCCCCGGGTCAATCCACACCATTGCACATGACTCACAGCGC
TTTGCCGCAGTTTCTCATTCCGTTTGCCCCACCCAGACGCTTCTGTATGT
CAAAATGTATGGCTTGTGAGCGATGAAATCGAGGAGAAAAGACTCGGACT
CTGTAACCATGAAAATCGCGAAATCATTACCTTCCGGCTCCATACCTTTC
AAGTCCATGTCTTCTCCGGGCGTGAAGGCTATTACGCTCCTAAAAGGTAC
TACATTCTTGAACACTCCCTCCGTTATCACAGATCGAGTTGTAAAGAGGG
CAGACGGTGGCTGAATGGGTATGTCATACCCGGATACGATGTATATCATG
CCCACCGATGTATCTCCTTCAAGCACCGCCTGAAGAGATTTAATAGTTGC
ATGCACGATACTTGACGAGCACCATTTTGTGCGAAGCCGAAGTTTTAAGT
CATACTTAGTTGTAAAGAAGCTGGGATGGCTGATTTTTGTGTTGCGGAAG
ACGAAGAAGCGAATACGAGACGCAAATACCTGTGTGTAACGGCCACAGAA
AAGGTCAAAATGTCGATTATGCAGAGTCATCGGAACTGAGAGCTAGTTCT
TCCGTAGCACTTCTCAATTGTGTATACTAATGAGTTGAAAAGAGGATGGT
AGTGTTCACGTCACGCTGTATGGGACTACCCGAACTGCGGGTCCCATGTC
GCCCTGCCTCATCGAGCGAAACACCATTGTATTCGTAAAAGGTAAACCCG
TGTCTTAAACACATGACTTACTTTATCACTTGCTCGCCATTTTTCCCATA
ATAGGGGATTCGTCACTCCATCGTGAGCTAAAAAAAGAATCCCCACGCTG
TGCTGGTCCTTATCAGGAACACTATCTATACTAGCATTCGGCTTTTCAAC
ATGTGTCCCACTTCTACCGATATCAAAATTGGCGTGTGATTTTCCGTCGA
CGCAATTTTCACTTCTTGAAGCATCTGGCCTAACAGGGGATGTTGATGCC
TTTCGTTGGCCTTCCTTGACGTGGGAAGAGACCGATTTAAGGACGTGGCT
CGGGCCGCCTTCAGCGCAATTTTTAACATTTTCGCCGACATCAGCATCAT
AC
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Coding sequence (CDS) from alignment at CM002457.1:822364..825515-

>rna1514 ID=rna1514|Name=rna1514|organism=Nannochloropsis gaditana|type=CDS|length=912bp|location=Sequence derived from alignment at CM002457.1:822364..825515- (Nannochloropsis gaditana)
ATGTCTGCGACATCAGGCACTCGATTCCTGGTGTTTATTACGGGTGCAAG
CCGTGGTTTTGGAAGATGCTTAGCCCTTGAAGCTGCCCGCAAATGGGGCC
CTGCTGTGGACATGCATCTTATTGCACGAAACGCGGAGGCACTCACGGCA
GTGAAACGTGATATTGAGGCATCTTTATCAGACCAAAGTAAAATTGGTGT
ACGTGTATGGACATGGCCTTTTGATTTGGGAAACCTAGAGACGTTGGAGC
CCAATTTTGCTAGAATTTTTGCCACCGTTGACGAATTTTCTGCAGAGCAA
GAATCGACAGCAATGATAATGCATAAGTATGGCAATGTCTACCTTTTCAA
TAACGCAGGATCAGTGGGACCAATAGCGTATGCGAAAGATCTTTGCACTG
ACTTGCCGGCCCTGCGTCAGTCTTTGGATCTGAACTTGACATCGTCAATC
TTGATAACTTCCCTCTTCCTTCGCCGTTTTTGCACCTTATCTTCGCCTTC
AAACAAAGTTCCTGCTTTATTCATCATCAACATTTCCTCAATGGCTGCCA
TTCAACCTTTTCATTCGTGGGGTGTGTACTGCGCGGGCAAAGCTGCGAGA
GACATGTTTCTGCAAGTGGTCGCACAGGAGCACCAGGGAGAAGGAAGTGC
GCGGGGGGAAGGTTCGATGGCAGGCGGAATGTCTGTGCACTTAAAAACTC
TCAACTATGCACCTGGCCCTCTCGACACAGATATGCAGATAGAGCTGCGA
GAGAGCGAATCGATCCATCCGCCGACGCGTGAGTGGTCAGAGAAGGCCTT
CAGAGAGGGCTGGCTTGTGAGGCCGGAGGAATCGGCTTCTAAATGCCTTC
GTATCTTGACTAAGAACGACTTTAAGAGTGGGGTGCACATTGACTATTAC
GATGATATGTAG
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Synonyms
Publications