|
|
Properties
| Property Name | Value |
|---|
| Product | phospholipase membrane-associated |
| Orig transcript id | gnl|cribi|Naga_100007g77.6501.mrna |
| Orig protein id | gnl|cribi|Naga_100007g77.6501 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002457.1 | supercontig | CM002457.1:788541..790777 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna1501 ID=rna1501|Name=rna1501|organism=Nannochloropsis gaditana|type=mRNA|length=540bp
ATGGAGGAAAGTCAAGGTAGTACAAACGCAGCAACCAGCCTATCTGGTTA
TCGTTTATCAGCAGCGGTAAAAGAAATCCAACGGCAGCACCCACCTGCTA
CAGTACAGGACATGCTAACAATCCTGGGCGACAGCCATGCGTTATTCAAA
TACGCACAAGCGGATGAGTGGCTGCAAGCAGTTCTAAGAGATGAGGGCAT
CGACTGCACTACGATCTCCCGACGAGACAGCACCGAGTTTGGCCGGAGCA
ATCGAGGCCCGACTTACGGAGTTCAATTGGTACCTAGATACAAGAGCGCG
CGGGCAGATCCATTGCAGGTCACTCCGAAGTCGTTGACCAATCAACAGTT
GAGAGGAAATATCTTTCGACTTTTACATGCGGTGAATCCTCTATTCGACA
CATTAGTTGAATCCCTCAGTCTGCACCCACATTTGACATTCACAAATATC
GGAGAGAAGGTGATTGACCAATCTCTTGGACGTTGCACGGCTGACCTGTA
TTTTTCTGTTTTCGAATCAATAAGTAGACATATTTCGTGA back to topprotein sequence of rna1501 >rna1501-protein ID=rna1501-protein|Name=rna1501|organism=Nannochloropsis gaditana|type=polypeptide|length=408bp
MPSSRLWRLLLLRCCIFLSAVAGAEHETATNASSKSGCPTFSRPAAPCTS
VWSMRPSQVDVVLAVGDSITAAFGARGKRGGFHESRGLSWSIGGDEGALT
LPNFIKEHNPNVTGYSLGSREASLCWGPVCRDVHRARHDRLNGALSGSMV
RNVWFDQLDYLEAELLALNVDVEKTWKVLTLFVGANDLCLVCKMQKRFDP
TEFAEYYRRVLIEIRSRFPRTLVNVVELFNVSAIYRATEDQPYCRGVHRL
VFLECDCAFGPESEARPYRDMMDEMATAYNQQVRAVIRDLSQVRNETFAI
ALHPFTRDLNITSFPMEMISTLDCFHPSAKSHGLTATALWNSMLTPPEKR
LRNIPSLTLEPLCAGEDSVFYPGSPPDAEVVWKDGGTEGYVEGVVQAMKE
SKSLLRTG back to topmRNA from alignment at CM002457.1:788541..790777+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna1501 ID=rna1501|Name=rna1501|organism=Nannochloropsis gaditana|type=mRNA|length=2237bp|location=Sequence derived from alignment at CM002457.1:788541..790777+ (Nannochloropsis gaditana)
TTTGCTGGCCTGCCCGAATGTGTTGTGTGCATAGGCAGGACAGCCTGGAA
GACTTGTTGTTCGCTTGGCAGCCGCGAGGGCTGTATCCGTGCGTGGTGGG
CATGCTGGGGCGGCATGCGGCAGCCTGCGCGCGTCTTGAAGCAAGCAACC
TCCCACCCAACCCCCTGAGTCTTGACACGATTTTTGTCCGGGCCTTTCCA
GAGGCGTTGGGAGCATTTGGTCCAGTTTTAGGTTCAGTAATACCGCACAC
ACTCATTACTGCTCCCGCAGGCTTCAAGCTTTGAGAGATCGCTCCCACCT
CGAACTGGAATTCGCCTTTCTGCGTCACGGTTCCCGTAGAAAATGCCTTC
TTCAAGGTTATGGCGTCTCCTTCTGCTACGGTGTTGCATTTTCCTGTCGG
CTGTGGCCGGAGCGGAGCATGAAACGGCCACAAACGCATCAAGCAAATCT
GGTTGCCCAACCTTTTCTCGACCAGCAGCGCCTTGTACTTCTGTGTGGAG
TATGCGGCCTTCGCAAGTTGACGTCGTTCTCGCGGTCGGGGACTCCATCA
CAGCTGCATTCGGAGCCCGTGGGAAACGGGGAGGCTTTCATGAGTCGCGA
GGGCTGAGTTGGAGTATTGGTGGCGATGAAGGTGCCTTGACATTGCCAAA
TTTCATCAAGGAGCACAATCCTAATGTTACGGGCTATTCTCTGGGCTCTC
GCGAGGCATCTTTATGCTGGGGCCCCGTGTGTAGGGATGTGCACCGTGCG
CGACATGATCGGCTGAATGGTGCACTCAGCGGCTCCATGTAAGAATGACT
CCGGAGAGAGGAATGTGGAACATGCATCTTTCAATTCGCTGATCAGACTT
GCTCCCGCGTGACTTGATCGAGGGAGCGCGGCTAAATATGTTTTTACTAT
GTTTATCTCAAAATTTAATGTCTTACACAGGGTCCGCAACGTGTGGTTCG
ACCAACTGGACTACCTTGAAGCCGAGTTGCTTGCTCTTAACGTGGACGTG
GAAAAGACATGGAAGGTCTTGACTTTGTTCGTGGGAGCGAATGACTTGTG
CCTGGTGTGTAAGATGCAAAAGCGCTTCGACCCGACAGAGTTCGCGGAAT
ACTACCGCCGTGTTTTGATCGAGATTCGGAGCAGATTTCCCCGGACGCTT
GTGAACGTGGTGGAGCTCTTTAACGTCTCCGCCATCTACCGTGCTACGGA
AGATCAGCCGTACTGCCGCGGCGTGCaccgccttgtcttccttgaGTGCG
ACTGCGCGTTCGGCCCCGAGTCCGAGGCCCGACCTTACAGGGACATGATG
GATGAGATGGCCACGGCTTACAACCAGCAAGTACGTGCAGTGATTCGAGA
CTTGTCGCAGGTCCGCAACGAAACTTTCGCTATCGCCCTCCACCCATTCA
CTCGGGACTTGAACATCACATCCTTCCCCATGGAGATGATCTCCACGCTC
GACTGCTTCCATCCCTCGGCTAAGAGCCACGGGTTGACGGCAACAGCGCT
CTGGAACAGCATGCTCACGCCACCTGAGAAACGGCTGAGAAACATCCCTT
CGTTAACTTTGGAACCCTTGTGTGCCGGCGAGGACAGTGTATTTTACCCG
GGGTCTCCGCCGGATGCGGAGGTCGTttggaaggacggagggacagaggg
ataCGTGGAGGGAGTCGTGCAGGCCAtgaaagagagcaagagcTTGTTGC
GAACAGGTTGAAGGGTAATAAGGTGGTTCGCTGCTCCGGCTGGCTGACAC
GGCCCCGAGGGACGCTGGCAATCACGGCGAATGATAGAGGTTGGAAGCAG
AGGGGGTCGGACAGCCTGCGACTCTCCACGTTAAGATGTTATCTGTATCA
AAGTGTAGAGACCCTTTTCCAACAAGTGAATAAAGTACATATTCTGGAGG
TTCGTTGGTGGAACGTAGAAAGTGGGAGAGTCAGCGTGAAGAGTGTTATG
CGTATTGTCATCCTCTATGGAAAAGCCAGAGCCGATGACGGACATTAGTC
TTACTACGATGAAGAAGGGATAAACATAGACCGGATttcaagagagagag
aagggagggtagagTCCCTTACTCAATGAGGCACGGTGCGCCCAGCCTTT
TCAGAGGAAAAGCGCGCCGAGTACTGTTGGATAAAGAAAGCTGGGAATCA
AGATGTTTCCATGTGCATACGAGTCGTGTAAAAGCAAATGATGAGCCGGC
TGCAGGTCAATCGAAGAAGCAACAAACCGAGTGGACA back to topCoding sequence (CDS) from alignment at CM002457.1:788541..790777+ >rna1501 ID=rna1501|Name=rna1501|organism=Nannochloropsis gaditana|type=CDS|length=2454bp|location=Sequence derived from alignment at CM002457.1:788541..790777+ (Nannochloropsis gaditana)
ATGCCTTCTTCAAGGTTATGGCGTCTCCTTCTGCTACGGTGTTGCATTTT
CCTGTCGGCTGTGGCCGGAGCGGAGCATGAAACGGCCACAAACGCATCAA
GCAAATCTGGTTGCCCAACCTTTTCTCGACCAGCAGCGCCTTGTACTTCT
GTGTGGAGTATGCGGCCTTCGCAAGTTGACGTCGTTCTCGCGGTCGGGGA
CTCCATCACAGCTGCATTCGGAGCCCGTGGGAAACGGGGAGGCTTTCATG
AGTCGCGAGGGCTGAGTTGGAGTATTGGTGGCGATGAAGGTGCCTTGACA
TTGCCAAATTTCATCAAGGAGCACAATCCTAATGTTACGGGCTATTCTCT
GGGCTCTCGCGAGGCATCTTTATGCTGGGGCCCCGTGTGTAGGGATGTGC
ACCGTGCGCGACATGATCGGCTGAATGGTGCACTCAGCGGCTCCATGGTC
CGCAACGTGTGGTTCGACCAACTGGACTACCTTGAAGCCGAGTTGCTTGC
TCTTAACGTGGACGTGGAAAAGACATGGAAGGTCTTGACTTTGTTCGTGG
GAGCGAATGACTTGTGCCTGGTGTGTAAGATGCAAAAGCGCTTCGACCCG
ACAGAGTTCGCGGAATACTACCGCCGTGTTTTGATCGAGATTCGGAGCAG
ATTTCCCCGGACGCTTGTGAACGTGGTGGAGCTCTTTAACGTCTCCGCCA
TCTACCGTGCTACGGAAGATCAGCCGTACTGCCGCGGCGTGCaccgcctt
gtcttccttgaGTGCGACTGCGCGTTCGGCCCCGAGTCCGAGGCCCGACC
TTACAGGGACATGATGGATGAGATGGCCACGGCTTACAACCAGCAAGTAC
GTGCAGTGATTCGAGACTTGTCGCAGGTCCGCAACGAAACTTTCGCTATC
GCCCTCCACCCATTCACTCGGGACTTGAACATCACATCCTTCCCCATGGA
GATGATCTCCACGCTCGACTGCTTCCATCCCTCGGCTAAGAGCCACGGGT
TGACGGCAACAGCGCTCTGGAACAGCATGCTCACGCCACCTGAGAAACGG
CTGAGAAACATCCCTTCGTTAACTTTGGAACCCTTGTGTGCCGGCGAGGA
CAGTGTATTTTACCCGGGGTCTCCGCCGGATGCGGAGGTCGTttggaagg
acggagggacagagggataCGTGGAGGGAGTCGTGCAGGCCAtgaaagag
agcaagagcTTGTTGCGAACAGGTTGAATGCCTTCTTCAAGGTTATGGCG
TCTCCTTCTGCTACGGTGTTGCATTTTCCTGTCGGCTGTGGCCGGAGCGG
AGCATGAAACGGCCACAAACGCATCAAGCAAATCTGGTTGCCCAACCTTT
TCTCGACCAGCAGCGCCTTGTACTTCTGTGTGGAGTATGCGGCCTTCGCA
AGTTGACGTCGTTCTCGCGGTCGGGGACTCCATCACAGCTGCATTCGGAG
CCCGTGGGAAACGGGGAGGCTTTCATGAGTCGCGAGGGCTGAGTTGGAGT
ATTGGTGGCGATGAAGGTGCCTTGACATTGCCAAATTTCATCAAGGAGCA
CAATCCTAATGTTACGGGCTATTCTCTGGGCTCTCGCGAGGCATCTTTAT
GCTGGGGCCCCGTGTGTAGGGATGTGCACCGTGCGCGACATGATCGGCTG
AATGGTGCACTCAGCGGCTCCATGGTCCGCAACGTGTGGTTCGACCAACT
GGACTACCTTGAAGCCGAGTTGCTTGCTCTTAACGTGGACGTGGAAAAGA
CATGGAAGGTCTTGACTTTGTTCGTGGGAGCGAATGACTTGTGCCTGGTG
TGTAAGATGCAAAAGCGCTTCGACCCGACAGAGTTCGCGGAATACTACCG
CCGTGTTTTGATCGAGATTCGGAGCAGATTTCCCCGGACGCTTGTGAACG
TGGTGGAGCTCTTTAACGTCTCCGCCATCTACCGTGCTACGGAAGATCAG
CCGTACTGCCGCGGCGTGCaccgccttgtcttccttgaGTGCGACTGCGC
GTTCGGCCCCGAGTCCGAGGCCCGACCTTACAGGGACATGATGGATGAGA
TGGCCACGGCTTACAACCAGCAAGTACGTGCAGTGATTCGAGACTTGTCG
CAGGTCCGCAACGAAACTTTCGCTATCGCCCTCCACCCATTCACTCGGGA
CTTGAACATCACATCCTTCCCCATGGAGATGATCTCCACGCTCGACTGCT
TCCATCCCTCGGCTAAGAGCCACGGGTTGACGGCAACAGCGCTCTGGAAC
AGCATGCTCACGCCACCTGAGAAACGGCTGAGAAACATCCCTTCGTTAAC
TTTGGAACCCTTGTGTGCCGGCGAGGACAGTGTATTTTACCCGGGGTCTC
CGCCGGATGCGGAGGTCGTttggaaggacggagggacagagggataCGTG
GAGGGAGTCGTGCAGGCCAtgaaagagagcaagagcTTGTTGCGAACAGG
TTGA back to top
|