EWM29150.1, cds1490 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM29150.1 vs. NCBI_GenBank
Match: gi|585111670|gb|EWM29150.1| (poly rna polymerase [Nannochloropsis gaditana]) HSP 1 Score: 3988.34 bits (10342), Expect = 0.000e+0 Identity = 1926/1926 (100.00%), Postives = 1926/1926 (100.00%), Query Frame = 0 Query: 1 MTHDSTWQQATLLSSLWEWFSELRPDERMQALTIDDPLWIRLYLKLFKHELKSRNKKPGRHLQQQHEQQEQQRGPSSLSASCPSLVGTHSPPKQQQQHPPSCYTVKRDKINYMYGRLLKQQQQQHAAASAGNGSRALAAWGAAGDLDDLEENKGMEEDDDELDFALAAEEEEHSLIEGYRIPWSQQGDVRKRAGRKGERSNSDIDGNDMKREQGSQVTLMCADRLLQRSLRVCTLGATPLDTLTLSQPAVEDAEALYQLLRAVTDGAFLSKPLPTATAKQLSLQSSAVAAISGGGPGLSAAAVASVLSGGTGNTLNSSSPTLASHTGTTALPMVLPEAPWLQECMGEDKETIPLRYLLVSRLELSLWVAYWRRMNRCSVSGPRVPVGLKGVTEQIKHLQEFALKADPAQLAALFEGLRPAQHVLLQQQPLKMTGDKVVRCREGGEHSLDGSGSMRTAQLMMERLLLIPLHWVYQDEGKIVRRVLERIQAACADLVAQELLMEDEARSNMSTDTGSCNQAKKKKKKKQSQQQQRVKEQLRLEKQGVVPRTSLPKVGESTIDRGLGAVMSNGLRLEGTPDVDGHQMEEQLFANRRKIKGEDGVVDEEMRPFSGSSAFRIRRSTDSARKTTGLVTAVVKEDREDQGDLWEEVGRRGTVMKNPSLPPSLTSKTASAHMNSKSGDSSKQVTSKLSDTEVKDTFLQPCYAECGTGRAGGRDSTGPIEACRNVAGDNLVEEIHKVKKENGESADVSAPLRTDGAQAISTNAATILEAAGAASLVAAEDPSNSSHCPATKGCSSALSPSHTPTSPPCVPPRPLYLSSDQPAISDPTSIEPAPAFVHLMVDHAAPTDADPTPSVPSIKVCPNRVSDVTEDEKGKEMQLADRIGTEGKADAGPVDCQENAPPVDADGQTSAGVVEKARAKKKTHNRREYKQRRQMRDAISSILTGLLDKVDQIVSAGQEEMQGDHPAFRKDAFSMSDDTLHQGPLKPKYYRDGQRVDKASMNKATSRAQYAASGIKAQGIQKVPAPKSVQRQRPDQEQEYIDVHQVHCQPLASYVHQQPNGRLKYKAYDHMKGAPCCGSASLPRMCNSQHAQHFPVHGNGRAWGSQGCGGDAGVHMFPSSRLPLYPRIHQYHHNPQYYQEYPRARRGGVELCATSMGANGGQRGQLNDGSDGWKECNDHRVVFQYPLLQQTPVQGLHNQYRHHRQHLQAQRRLKSKTERSDGYGTTTGDFESVVPPPLVLQQPHELYALDMEAEQARLAYNQGIDAMRSQLSENIADFMKNRETKMMEHRAARERILEEVRSIIQSLWAGSRVELYGSCFTGLDLISSDLDLVVCGLKPAGTASPALSALSIKTPQMSRQQDRKQGGTTSSSSPEGTCSISTTTSGKSCISSSSTTSTTTSNSTGCTTGQSSAASSVAGEEEEETDNHSHSQLSDTSSNNTTARTATGSRSPALSSPASSPRFGPAVSSTTSAITSSTTPPRSLPPGHSESARLLYQLAGALEGRAWIRSIKTIDTAFVPVIKILADPAALSTGQESLAPGSATTWVPVDISLEGPQHGGIASSLLIRDLVGPGKPYAHAVPLTLVLKALLMQRGLNQPWCGGISSYALMLMVITVLQQFERPEEAQANVMAIARSVDCIKRRVLQSHSSSDEKNCGTRTSIRGENCVDHIIPSKEGKRSQRDDASSNTDANGTMDYGKAVRGALHSLEDEVHKGEEYFEVRPPPPLVTGGYGSPAEVSYRLWSQFAAAQTSEGRMAEGHEAGKQESNSHVHRLPAGFLLTYFLEYYGRIFNPQAEGIAVDQGYGLTFPLGEFCAARGLPVVADPLTILDPLDRAVNVSRCAFRIGEIQYLFQQCLTALETQGMEMARAMLHKPAVEDDWSHVGSGGGVGKRKKSKKGTDGQRQPTNSTSSVPTPKNDVLSLILGY 1926 MTHDSTWQQATLLSSLWEWFSELRPDERMQALTIDDPLWIRLYLKLFKHELKSRNKKPGRHLQQQHEQQEQQRGPSSLSASCPSLVGTHSPPKQQQQHPPSCYTVKRDKINYMYGRLLKQQQQQHAAASAGNGSRALAAWGAAGDLDDLEENKGMEEDDDELDFALAAEEEEHSLIEGYRIPWSQQGDVRKRAGRKGERSNSDIDGNDMKREQGSQVTLMCADRLLQRSLRVCTLGATPLDTLTLSQPAVEDAEALYQLLRAVTDGAFLSKPLPTATAKQLSLQSSAVAAISGGGPGLSAAAVASVLSGGTGNTLNSSSPTLASHTGTTALPMVLPEAPWLQECMGEDKETIPLRYLLVSRLELSLWVAYWRRMNRCSVSGPRVPVGLKGVTEQIKHLQEFALKADPAQLAALFEGLRPAQHVLLQQQPLKMTGDKVVRCREGGEHSLDGSGSMRTAQLMMERLLLIPLHWVYQDEGKIVRRVLERIQAACADLVAQELLMEDEARSNMSTDTGSCNQAKKKKKKKQSQQQQRVKEQLRLEKQGVVPRTSLPKVGESTIDRGLGAVMSNGLRLEGTPDVDGHQMEEQLFANRRKIKGEDGVVDEEMRPFSGSSAFRIRRSTDSARKTTGLVTAVVKEDREDQGDLWEEVGRRGTVMKNPSLPPSLTSKTASAHMNSKSGDSSKQVTSKLSDTEVKDTFLQPCYAECGTGRAGGRDSTGPIEACRNVAGDNLVEEIHKVKKENGESADVSAPLRTDGAQAISTNAATILEAAGAASLVAAEDPSNSSHCPATKGCSSALSPSHTPTSPPCVPPRPLYLSSDQPAISDPTSIEPAPAFVHLMVDHAAPTDADPTPSVPSIKVCPNRVSDVTEDEKGKEMQLADRIGTEGKADAGPVDCQENAPPVDADGQTSAGVVEKARAKKKTHNRREYKQRRQMRDAISSILTGLLDKVDQIVSAGQEEMQGDHPAFRKDAFSMSDDTLHQGPLKPKYYRDGQRVDKASMNKATSRAQYAASGIKAQGIQKVPAPKSVQRQRPDQEQEYIDVHQVHCQPLASYVHQQPNGRLKYKAYDHMKGAPCCGSASLPRMCNSQHAQHFPVHGNGRAWGSQGCGGDAGVHMFPSSRLPLYPRIHQYHHNPQYYQEYPRARRGGVELCATSMGANGGQRGQLNDGSDGWKECNDHRVVFQYPLLQQTPVQGLHNQYRHHRQHLQAQRRLKSKTERSDGYGTTTGDFESVVPPPLVLQQPHELYALDMEAEQARLAYNQGIDAMRSQLSENIADFMKNRETKMMEHRAARERILEEVRSIIQSLWAGSRVELYGSCFTGLDLISSDLDLVVCGLKPAGTASPALSALSIKTPQMSRQQDRKQGGTTSSSSPEGTCSISTTTSGKSCISSSSTTSTTTSNSTGCTTGQSSAASSVAGEEEEETDNHSHSQLSDTSSNNTTARTATGSRSPALSSPASSPRFGPAVSSTTSAITSSTTPPRSLPPGHSESARLLYQLAGALEGRAWIRSIKTIDTAFVPVIKILADPAALSTGQESLAPGSATTWVPVDISLEGPQHGGIASSLLIRDLVGPGKPYAHAVPLTLVLKALLMQRGLNQPWCGGISSYALMLMVITVLQQFERPEEAQANVMAIARSVDCIKRRVLQSHSSSDEKNCGTRTSIRGENCVDHIIPSKEGKRSQRDDASSNTDANGTMDYGKAVRGALHSLEDEVHKGEEYFEVRPPPPLVTGGYGSPAEVSYRLWSQFAAAQTSEGRMAEGHEAGKQESNSHVHRLPAGFLLTYFLEYYGRIFNPQAEGIAVDQGYGLTFPLGEFCAARGLPVVADPLTILDPLDRAVNVSRCAFRIGEIQYLFQQCLTALETQGMEMARAMLHKPAVEDDWSHVGSGGGVGKRKKSKKGTDGQRQPTNSTSSVPTPKNDVLSLILGY Sbjct: 1 MTHDSTWQQATLLSSLWEWFSELRPDERMQALTIDDPLWIRLYLKLFKHELKSRNKKPGRHLQQQHEQQEQQRGPSSLSASCPSLVGTHSPPKQQQQHPPSCYTVKRDKINYMYGRLLKQQQQQHAAASAGNGSRALAAWGAAGDLDDLEENKGMEEDDDELDFALAAEEEEHSLIEGYRIPWSQQGDVRKRAGRKGERSNSDIDGNDMKREQGSQVTLMCADRLLQRSLRVCTLGATPLDTLTLSQPAVEDAEALYQLLRAVTDGAFLSKPLPTATAKQLSLQSSAVAAISGGGPGLSAAAVASVLSGGTGNTLNSSSPTLASHTGTTALPMVLPEAPWLQECMGEDKETIPLRYLLVSRLELSLWVAYWRRMNRCSVSGPRVPVGLKGVTEQIKHLQEFALKADPAQLAALFEGLRPAQHVLLQQQPLKMTGDKVVRCREGGEHSLDGSGSMRTAQLMMERLLLIPLHWVYQDEGKIVRRVLERIQAACADLVAQELLMEDEARSNMSTDTGSCNQAKKKKKKKQSQQQQRVKEQLRLEKQGVVPRTSLPKVGESTIDRGLGAVMSNGLRLEGTPDVDGHQMEEQLFANRRKIKGEDGVVDEEMRPFSGSSAFRIRRSTDSARKTTGLVTAVVKEDREDQGDLWEEVGRRGTVMKNPSLPPSLTSKTASAHMNSKSGDSSKQVTSKLSDTEVKDTFLQPCYAECGTGRAGGRDSTGPIEACRNVAGDNLVEEIHKVKKENGESADVSAPLRTDGAQAISTNAATILEAAGAASLVAAEDPSNSSHCPATKGCSSALSPSHTPTSPPCVPPRPLYLSSDQPAISDPTSIEPAPAFVHLMVDHAAPTDADPTPSVPSIKVCPNRVSDVTEDEKGKEMQLADRIGTEGKADAGPVDCQENAPPVDADGQTSAGVVEKARAKKKTHNRREYKQRRQMRDAISSILTGLLDKVDQIVSAGQEEMQGDHPAFRKDAFSMSDDTLHQGPLKPKYYRDGQRVDKASMNKATSRAQYAASGIKAQGIQKVPAPKSVQRQRPDQEQEYIDVHQVHCQPLASYVHQQPNGRLKYKAYDHMKGAPCCGSASLPRMCNSQHAQHFPVHGNGRAWGSQGCGGDAGVHMFPSSRLPLYPRIHQYHHNPQYYQEYPRARRGGVELCATSMGANGGQRGQLNDGSDGWKECNDHRVVFQYPLLQQTPVQGLHNQYRHHRQHLQAQRRLKSKTERSDGYGTTTGDFESVVPPPLVLQQPHELYALDMEAEQARLAYNQGIDAMRSQLSENIADFMKNRETKMMEHRAARERILEEVRSIIQSLWAGSRVELYGSCFTGLDLISSDLDLVVCGLKPAGTASPALSALSIKTPQMSRQQDRKQGGTTSSSSPEGTCSISTTTSGKSCISSSSTTSTTTSNSTGCTTGQSSAASSVAGEEEEETDNHSHSQLSDTSSNNTTARTATGSRSPALSSPASSPRFGPAVSSTTSAITSSTTPPRSLPPGHSESARLLYQLAGALEGRAWIRSIKTIDTAFVPVIKILADPAALSTGQESLAPGSATTWVPVDISLEGPQHGGIASSLLIRDLVGPGKPYAHAVPLTLVLKALLMQRGLNQPWCGGISSYALMLMVITVLQQFERPEEAQANVMAIARSVDCIKRRVLQSHSSSDEKNCGTRTSIRGENCVDHIIPSKEGKRSQRDDASSNTDANGTMDYGKAVRGALHSLEDEVHKGEEYFEVRPPPPLVTGGYGSPAEVSYRLWSQFAAAQTSEGRMAEGHEAGKQESNSHVHRLPAGFLLTYFLEYYGRIFNPQAEGIAVDQGYGLTFPLGEFCAARGLPVVADPLTILDPLDRAVNVSRCAFRIGEIQYLFQQCLTALETQGMEMARAMLHKPAVEDDWSHVGSGGGVGKRKKSKKGTDGQRQPTNSTSSVPTPKNDVLSLILGY 1926
BLAST of EWM29150.1 vs. NCBI_GenBank
Match: gi|553196269|ref|XP_005856305.1| (poly rna polymerase, partial [Nannochloropsis gaditana CCMP526] >gi|422292753|gb|EKU20055.1| poly rna polymerase, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 3370.1 bits (8737), Expect = 0.000e+0 Identity = 1636/1649 (99.21%), Postives = 1638/1649 (99.33%), Query Frame = 0 Query: 278 AKQLSLQSSAVAAISGGGPGLSAAAVASVLSGGTGNTLNSSSPTLASHTGTTALPMVLPEAPWLQECMGEDKETIPLRYLLVSRLELSLWVAYWRRMNRCSVSGPRVPVGLKGVTEQIKHLQEFALKADPAQLAALFEGLRPAQHVLLQQQPLKMTGDKVVRCREGGEHSLDGSGSMRTAQLMMERLLLIPLHWVYQDEGKIVRRVLERIQAACADLVAQELLMEDEARSNMSTDTGSCNQAKKKKKKKQSQQQQRVKEQLRLEKQGVVPRTSLPKVGESTIDRGLGAVMSNGLRLEGTPDVDGHQMEEQLFANRRKIKGEDGVVDEEMRPFSGSSAFRIRRSTDSARKTTGLVTAVVKEDREDQGDLWEEVGRRGTVMKNPSLPPSLTSKTASAHMNSKSGDSSKQVTSKLSDTEVKDTFLQPCYAECGTGRAGGRDSTGPIEACRNVAGDNLVEEIHKVKKENGESADVSAPLRTDGAQAISTNAATILEAAGAASLVAAEDPSNSSHCPATKGCSSALSPSHTPTSPPCVPPRPLYLSSDQPAISDPTSIEPAPAFVHLMVDHAAPTDADPTPSVPSIKVCPNRVSDVTEDEKGKEMQLADRIGTEGKADAGPVDCQENAPPVDADGQTSAGVVEKARAKKKTHNRREYKQRRQMRDAISSILTGLLDKVDQIVSAGQEEMQGDHPAFRKDAFSMSDDTLHQGPLKPKYYRDGQRVDKASMNKATSRAQYAASGIKAQGIQKVPAPKSVQRQRPDQEQEYIDVHQVHCQPLASYVHQQPNGRLKYKAYDHMKGAPCCGSASLPRMCNSQHAQHFPVHGNGRAWGSQGCGGDAGVHMFPSSRLPLYPRIHQYHHNPQYYQEYPRARRGGVELCATSMGANGGQRGQLNDGSDGWKECNDHRVVFQYPLLQQTPVQGLHNQYRHHRQHLQAQRRLKSKTERSDGYGTTTGDFESVVPPPLVLQQPHELYALDMEAEQARLAYNQGIDAMRSQLSENIADFMKNRETKMMEHRAARERILEEVRSIIQSLWAGSRVELYGSCFTGLDLISSDLDLVVCGLKPAGTASPALSALSIKTPQMSRQQDRKQGGTTSSSSPEGTCSISTTTSGKSCISSSSTTSTTTSNSTGCTTGQSSAASSVAGEEEEETDNHSHSQLSDTSSNNTTARTATGSRSPALSSPASSPRFGPAVSSTTSAITSSTTPPRSLPPGHSESARLLYQLAGALEGRAWIRSIKTIDTAFVPVIKILADPAALSTGQESLAPGSATTWVPVDISLEGPQHGGIASSLLIRDLVGPGKPYAHAVPLTLVLKALLMQRGLNQPWCGGISSYALMLMVITVLQQFERPEEAQANVMAIARSVDCIKRRVLQSHSSSDEKNCGTRTSIRGENCVDHIIPSKEGKRSQRDDASSNTDANGTMDYGKAVRGALHSLEDEVHKGEEYFEVRPPPPLVTGGYGSPAEVSYRLWSQFAAAQTSEGRMAEGHEAGKQESNSHVHRLPAGFLLTYFLEYYGRIFNPQAEGIAVDQGYGLTFPLGEFCAARGLPVVADPLTILDPLDRAVNVSRCAFRIGEIQYLFQQCLTALETQGMEMARAMLHKPAVEDDWSHVGSGGGVGKRKKSKKGTDGQRQPTNSTSSVPTPKNDVLSLILGY 1926 AKQLSLQSSAVAAISGGGPGLSAAAVASVLSGGTGNTLNSSSPTLASHTGTTALPMVLPEAPWLQECMGEDKETIPLRYLLVSRLELSLWVAYWRRMNRCSVSGPRVPVGLKGVTEQIKHLQEFALKADPAQLAALFEGLRPAQHVLLQQQPLKMTGDKVVRCREGGEHSLDGSGSMRTAQLMMERLLLIPLHWVYQDEGKIVRRVLERIQAACADLVAQELLMEDEARSNMSTDTGSCNQAKKKKKKKQSQQQQRVKEQLRLEKQGVVPRTSLPKVGESTIDRGLGAVMSNGLRLEGTPDVDGHQMEEQLFANRR IKGEDGVVDEEMRPFSGSSAFRIRRSTDSARKTTGLVTAVVKEDREDQ DLWEEVGRRGTVMK PSLPPSLTSKTASAHMNSKSGDSSKQVTSK SDTEVKDT LQPCYAECGTGRAGGRDSTGPIEACRNVAGDNLVEEIHKVKKENGESADVSAPLRTDGAQAISTNAATILEAAGAASLVAAEDPSNSSHCPATKGCSSALSPSHTPTSPPCVPPRPLYLSSDQPAISDPTSIEPAPAFVHLMVDHAAPTDADPT SVPSIKVCPNRVSDVTEDEKGKEMQLADRIGTEGKADAGPVDCQENAPPVDADGQTSAGVVEKARAKKKTHNRREYKQRRQMRDAISSILTGLLDKVDQIVSAGQEEMQGDHPAFRKDAFSMSDDTLHQG LKPKYYRDGQRVDKASMNKATSRAQYAASGIKAQGIQKVPAPKSVQRQRPDQEQEYIDVHQVHC+PLASYVHQQPNGRLKYKAYDHMKGAPCCGSASLPRMCNSQHAQHFPVHGNGRAWGSQGCGGDAGVHMFPSSRLPLYPRIHQYHHNPQYYQEYPRARRGGVELCATSMGANGGQRGQLNDGSDGWKECNDHRVVFQYPLLQQTPVQGLHNQYRHHRQHLQAQRRLKSKTERSDGYGTTTGDFESVVPPPLVLQQPHELYALDMEAEQARLAYNQGIDAMRSQLSENIADFMKNRETKMMEHRAARERILEEVRSIIQSLWAGSRVELYGSCFTGLDLISSDLDLVVCGLKPAGTASPALSALSIKTPQMSRQQDRKQGGTTSSSSPEGTCSISTTTSGKSCISSSSTTSTTTSNSTGCTTGQSSAASSVAGEEEEETDNHSHSQLSDTSSNNTTARTATGSRSPALSSPASSPRFGPAVSSTTSAITSSTTPPRSLPPGHSESARLLYQLAGALEGRAWIRSIKTIDTAFVPVIKILADPAALSTGQESLAPGSATT VPVDISLEGPQHGGIASSLLIRDLVGPGKPYAHAVPLTLVLKALLMQRGLNQPWCGGISSYALMLMVITVLQQFERPEEAQANVMAIARSVDCIKRRVLQSHSSSDEKNCGTRTSIRGENCVDH I SKEGKRSQRDDASSNTDANGTMDYGKAVRGALHSLEDEVHKGEEYFEVRPPPPLVTGGYGSPAEVSYRLWSQFAAAQTSEGRMAEGHEAGKQESNSHVHRLPAGFLLTYFLEYYGRIFNPQAEGIAVDQGYGLTFPLGEFCAARGLPVVADPLTILDPLDRAVNVSRCAFRIGEIQYLFQQCLTALETQGMEMARAMLHKPAVEDDWSHVGSGGGVGKRKKS KGT+GQRQPTNSTSSVPTPKNDVLSLILGY Sbjct: 1 AKQLSLQSSAVAAISGGGPGLSAAAVASVLSGGTGNTLNSSSPTLASHTGTTALPMVLPEAPWLQECMGEDKETIPLRYLLVSRLELSLWVAYWRRMNRCSVSGPRVPVGLKGVTEQIKHLQEFALKADPAQLAALFEGLRPAQHVLLQQQPLKMTGDKVVRCREGGEHSLDGSGSMRTAQLMMERLLLIPLHWVYQDEGKIVRRVLERIQAACADLVAQELLMEDEARSNMSTDTGSCNQAKKKKKKKQSQQQQRVKEQLRLEKQGVVPRTSLPKVGESTIDRGLGAVMSNGLRLEGTPDVDGHQMEEQLFANRR-IKGEDGVVDEEMRPFSGSSAFRIRRSTDSARKTTGLVTAVVKEDREDQDDLWEEVGRRGTVMKKPSLPPSLTSKTASAHMNSKSGDSSKQVTSKHSDTEVKDTLLQPCYAECGTGRAGGRDSTGPIEACRNVAGDNLVEEIHKVKKENGESADVSAPLRTDGAQAISTNAATILEAAGAASLVAAEDPSNSSHCPATKGCSSALSPSHTPTSPPCVPPRPLYLSSDQPAISDPTSIEPAPAFVHLMVDHAAPTDADPTSSVPSIKVCPNRVSDVTEDEKGKEMQLADRIGTEGKADAGPVDCQENAPPVDADGQTSAGVVEKARAKKKTHNRREYKQRRQMRDAISSILTGLLDKVDQIVSAGQEEMQGDHPAFRKDAFSMSDDTLHQGALKPKYYRDGQRVDKASMNKATSRAQYAASGIKAQGIQKVPAPKSVQRQRPDQEQEYIDVHQVHCKPLASYVHQQPNGRLKYKAYDHMKGAPCCGSASLPRMCNSQHAQHFPVHGNGRAWGSQGCGGDAGVHMFPSSRLPLYPRIHQYHHNPQYYQEYPRARRGGVELCATSMGANGGQRGQLNDGSDGWKECNDHRVVFQYPLLQQTPVQGLHNQYRHHRQHLQAQRRLKSKTERSDGYGTTTGDFESVVPPPLVLQQPHELYALDMEAEQARLAYNQGIDAMRSQLSENIADFMKNRETKMMEHRAARERILEEVRSIIQSLWAGSRVELYGSCFTGLDLISSDLDLVVCGLKPAGTASPALSALSIKTPQMSRQQDRKQGGTTSSSSPEGTCSISTTTSGKSCISSSSTTSTTTSNSTGCTTGQSSAASSVAGEEEEETDNHSHSQLSDTSSNNTTARTATGSRSPALSSPASSPRFGPAVSSTTSAITSSTTPPRSLPPGHSESARLLYQLAGALEGRAWIRSIKTIDTAFVPVIKILADPAALSTGQESLAPGSATTLVPVDISLEGPQHGGIASSLLIRDLVGPGKPYAHAVPLTLVLKALLMQRGLNQPWCGGISSYALMLMVITVLQQFERPEEAQANVMAIARSVDCIKRRVLQSHSSSDEKNCGTRTSIRGENCVDHSISSKEGKRSQRDDASSNTDANGTMDYGKAVRGALHSLEDEVHKGEEYFEVRPPPPLVTGGYGSPAEVSYRLWSQFAAAQTSEGRMAEGHEAGKQESNSHVHRLPAGFLLTYFLEYYGRIFNPQAEGIAVDQGYGLTFPLGEFCAARGLPVVADPLTILDPLDRAVNVSRCAFRIGEIQYLFQQCLTALETQGMEMARAMLHKPAVEDDWSHVGSGGGVGKRKKS-KGTNGQRQPTNSTSSVPTPKNDVLSLILGY 1647
BLAST of EWM29150.1 vs. NCBI_GenBank
Match: gi|298715261|emb|CBJ27910.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 138.658 bits (348), Expect = 8.311e-29 Identity = 71/138 (51.45%), Postives = 91/138 (65.94%), Query Frame = 0 Query: 1495 LYQLAGALEGRAWIRSIKTIDTAFVPVIKILADPAALSTGQ-----------ESLAPGSATTWVPVDISLEGPQHGGIASSLLIRDLVGPGKPYAHAVPLTLVLKALLMQRGLNQPWCGGISSYALMLMVITVLQQFE 1621 L +LA L+ + W+R +K I+TA VPVIKILADP + GQ L GS ++P+DIS E PQHGGIASS +RD + GK Y A+P +VLK +L QRGLNQPW GG+SSY+L+ M+ITVLQ+ E Sbjct: 1512 LQKLANVLQEQTWVRGMKVIETAAVPVIKILADPVSNGNGQFMFDDSRNGRDGWLGGGSGLDYIPLDISFESPQHGGIASSKWVRDCIQGGK-YGFALPAVMVLKEILCQRGLNQPWSGGLSSYSLINMMITVLQRAE 1648 HSP 2 Score: 69.707 bits (169), Expect = 7.472e-8 Identity = 28/61 (45.90%), Postives = 41/61 (67.21%), Query Frame = 0 Query: 1278 FMKNRETKMMEHRAARERILEEVRSIIQSLWAGSRVELYGSCFTGLDLISSDLDLVVCGLK 1338 FM+ M R A +++ VR ++ +W +RVE+YGSCFTGL+L SSD+D+VVCG+ Sbjct: 1430 FMQKLGRAMRPRRRAWSQVIARVRELVSGIWKEARVEMYGSCFTGLELPSSDVDVVVCGIN 1490
BLAST of EWM29150.1 vs. NCBI_GenBank
Match: gi|1173949938|gb|OQR97930.1| (hypothetical protein ACHHYP_09454 [Achlya hypogyna]) HSP 1 Score: 85.1149 bits (209), Expect = 7.513e-13 Identity = 92/384 (23.96%), Postives = 156/384 (40.62%), Query Frame = 0 Query: 1495 LYQLAGALEGRAWIRSIKTIDTAFVPVIKILADPAALSTGQESLAPGSATTWVPVDISLEGPQ-HGGIASSLLIRDLVGPGKPYAHAVPLTLVLKALLMQRGLNQPWCGGISSYALMLMVITVLQQFERPEEAQANVMAIARSVDCIKRRVLQSHSSSDEK----NCGTRTSIRGENCVDHIIPSKEGKRSQRDDASSNTDANGTMDYGKAVRGALHSLEDEVHKGEEYFEV---RPPPPLVTGGYGSPAEVSYRLWSQFAAAQTSEGRM--AEGHEAGKQESNSHVHRLP------AGFLLTYFLEYYGRIFNPQAEGIAVDQGYGLTFPL---GEFCAARGLPVVADPLTILDPLDRAVNVSRCAFRIGEIQYLFQQCLTAL 1859 L +LA L+ W+ SI +DTA +P++K++ S + VP+DI+ E H G+ + L++ LV PL +V K LL +RGLN + GG+SSY+++LM++ Q R N + S + + + D+K + + + + +P+K S + + +A Y V E E Y V P P V + + A +Y + +A+ + + +A +++++ P G LE++G IFN Q G++V G G F L G A+ L + I DP+ NVS +F ++ LF+ AL Sbjct: 212 LKRLAAQLQSEKWVESIVMVDTAKIPLLKLV----------------SLDSSVPIDITFESANTHSGLMARDLVKSLVDE---VPELYPLAIVFKQLLRERGLNDVYSGGVSSYSIVLMIVH-FSQLWRAGPTAFNAAMVYASGSLPTEAITIAETPKDDKPAAASSPPSSPAKAQVASPKTVPAKAPPASPKKNLIKVPEAPAVKSYASVV-------ETEPFTTLSYAAVAVGSPTPKPVRSSHPALAPSTYASMAMKESAKEDQLELGSVTSSQADTEDTSADEREDPEPWSVCLGAHAVRMLEFFGVIFNYQKSGMSVRNG-GFIFRLHDEGPSPFAKLL------MVIEDPIHPERNVSAASFAFQKVVALFEDSFMAL 561
BLAST of EWM29150.1 vs. NCBI_GenBank
Match: gi|1214685040|gb|OWZ02264.1| (hypothetical protein PHMEG_00026204 [Phytophthora megakarya]) HSP 1 Score: 82.0333 bits (201), Expect = 6.984e-12 Identity = 51/132 (38.64%), Postives = 72/132 (54.55%), Query Frame = 0 Query: 1491 SARLLYQLAGALEGRAWIRSIKTIDTAFVPVIKILADPAALSTGQESLAPGSATTWVPVDISLEGPQHGGIASSLLIRDLVGPGKPYAHAVP----LTLVLKALLMQRGLNQPWCGGISSYALMLMVITVLQ 1618 +A+ L QLA LE + W+ S+ +DTA VPV+K++ SA T VP+DI+ E S LL RDL+ K YA +P L +V K LL +R LN + GG+SSY+++LM+I Q Sbjct: 190 TAKHLKQLAKVLEKKKWVESLLCLDTAKVPVLKLV----------------SAETSVPIDITFES---AATHSGLLARDLI---KRYADTLPELYPLAIVFKQLLRERDLNDAYTGGLSSYSVVLMIIHFSQ 299
BLAST of EWM29150.1 vs. NCBI_GenBank
Match: gi|570968820|gb|ETP31939.1| (hypothetical protein F442_19262 [Phytophthora parasitica P10297]) HSP 1 Score: 80.8777 bits (198), Expect = 1.740e-11 Identity = 50/128 (39.06%), Postives = 71/128 (55.47%), Query Frame = 0 Query: 1491 SARLLYQLAGALEGRAWIRSIKTIDTAFVPVIKILADPAALSTGQESLAPGSATTWVPVDISLEGPQHGGIASSLLIRDLVGPGKPYAHAVP----LTLVLKALLMQRGLNQPWCGGISSYALMLMVI 1614 +A+ L QLA LE + W+ S+ +DTA VPV+K++ SA T VP+DI+ E S LL RDL+ K YA +P L +V K LL +R LN + GG+SSY+++LM+I Sbjct: 219 TAKHLRQLAKVLEKKKWVESLLCLDTAKVPVLKLV----------------SAETSVPIDITFES---AATHSGLLARDLI---KRYADNMPELYPLAIVFKQLLRERDLNDAYTGGLSSYSVVLMII 324
BLAST of EWM29150.1 vs. NCBI_GenBank
Match: gi|567948504|gb|ETK74251.1| (hypothetical protein L915_18910 [Phytophthora parasitica] >gi|568006680|gb|ETL80931.1| hypothetical protein L917_18632 [Phytophthora parasitica]) HSP 1 Score: 80.8777 bits (198), Expect = 1.740e-11 Identity = 50/128 (39.06%), Postives = 71/128 (55.47%), Query Frame = 0 Query: 1491 SARLLYQLAGALEGRAWIRSIKTIDTAFVPVIKILADPAALSTGQESLAPGSATTWVPVDISLEGPQHGGIASSLLIRDLVGPGKPYAHAVP----LTLVLKALLMQRGLNQPWCGGISSYALMLMVI 1614 +A+ L QLA LE + W+ S+ +DTA VPV+K++ SA T VP+DI+ E S LL RDL+ K YA +P L +V K LL +R LN + GG+SSY+++LM+I Sbjct: 219 TAKHLRQLAKVLEKKKWVESLLCLDTAKVPVLKLV----------------SAETSVPIDITFES---AATHSGLLARDLI---KRYADNMPELYPLAIVFKQLLRERDLNDAYTGGLSSYSVVLMII 324
BLAST of EWM29150.1 vs. NCBI_GenBank
Match: gi|570938513|gb|ETP03770.1| (hypothetical protein F441_19314 [Phytophthora parasitica CJ01A1]) HSP 1 Score: 80.4925 bits (197), Expect = 1.832e-11 Identity = 50/128 (39.06%), Postives = 71/128 (55.47%), Query Frame = 0 Query: 1491 SARLLYQLAGALEGRAWIRSIKTIDTAFVPVIKILADPAALSTGQESLAPGSATTWVPVDISLEGPQHGGIASSLLIRDLVGPGKPYAHAVP----LTLVLKALLMQRGLNQPWCGGISSYALMLMVI 1614 +A+ L QLA LE + W+ S+ +DTA VPV+K++ SA T VP+DI+ E S LL RDL+ K YA +P L +V K LL +R LN + GG+SSY+++LM+I Sbjct: 219 TAKHLRQLAKVLEKKKWVESLLCLDTAKVPVLKLV----------------SAETSVPIDITFES---AATHSGLLARDLI---KRYADNMPELYPLAIVFKQLLRERDLNDAYTGGLSSYSVVLMII 324
BLAST of EWM29150.1 vs. NCBI_GenBank
Match: gi|567977173|gb|ETL27680.1| (hypothetical protein L916_18808 [Phytophthora parasitica]) HSP 1 Score: 80.4925 bits (197), Expect = 1.832e-11 Identity = 50/128 (39.06%), Postives = 71/128 (55.47%), Query Frame = 0 Query: 1491 SARLLYQLAGALEGRAWIRSIKTIDTAFVPVIKILADPAALSTGQESLAPGSATTWVPVDISLEGPQHGGIASSLLIRDLVGPGKPYAHAVP----LTLVLKALLMQRGLNQPWCGGISSYALMLMVI 1614 +A+ L QLA LE + W+ S+ +DTA VPV+K++ SA T VP+DI+ E S LL RDL+ K YA +P L +V K LL +R LN + GG+SSY+++LM+I Sbjct: 219 TAKHLRQLAKVLEKKKWVESLLCLDTAKVPVLKLV----------------SAETSVPIDITFES---AATHSGLLARDLI---KRYADNMPELYPLAIVFKQLLRERDLNDAYTGGLSSYSVVLMII 324
BLAST of EWM29150.1 vs. NCBI_GenBank
Match: gi|675177019|ref|XP_008897394.1| (hypothetical protein PPTG_05561 [Phytophthora parasitica INRA-310] >gi|568103218|gb|ETN17889.1| hypothetical protein PPTG_05561 [Phytophthora parasitica INRA-310]) HSP 1 Score: 80.4925 bits (197), Expect = 1.880e-11 Identity = 50/128 (39.06%), Postives = 71/128 (55.47%), Query Frame = 0 Query: 1491 SARLLYQLAGALEGRAWIRSIKTIDTAFVPVIKILADPAALSTGQESLAPGSATTWVPVDISLEGPQHGGIASSLLIRDLVGPGKPYAHAVP----LTLVLKALLMQRGLNQPWCGGISSYALMLMVI 1614 +A+ L QLA LE + W+ S+ +DTA VPV+K++ SA T VP+DI+ E S LL RDL+ K YA +P L +V K LL +R LN + GG+SSY+++LM+I Sbjct: 219 TAKHLRQLAKVLEKKKWVESLLCLDTAKVPVLKLV----------------SAETSVPIDITFES---AATHSGLLARDLI---KRYADNMPELYPLAIVFKQLLRERDLNDAYTGGLSSYSVVLMII 324 The following BLAST results are available for this feature:
BLAST of EWM29150.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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