rna1425, rna1425 (mRNA) Nannochloropsis gaditana

Overview
Namerna1425
Unique Namerna1425
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length439
Alignment locationCM002457.1:602576..604689 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100119g1.7993.mrna
Orig protein idgnl|cribi|Naga_100119g1.7993
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002457.1supercontigCM002457.1:602576..604689 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100119g1gene1376Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna1425rna1425-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM29235.1cds1423Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna1425 ID=rna1425|Name=rna1425|organism=Nannochloropsis gaditana|type=mRNA|length=439bp
GAGGAGGAGGTGGATGGTGAATCAAAAACAAATAATTACACCATTGATGC
CCGGGTGGCAGATATTGTATTGACCGGCGATGGTAGCGGGCAACTTGAAA
CCATCACCGTTGTAGACGCTTCACGCGAGGAAAAGGAGCAGGAACTCATG
TCCTTCCTGCAAGAGGAACTACCCCAGATCCAACGAGAAGTGGCCTTGAG
TGCTCAATCCCTATGGTTCAAACGAGAGGGGTACCAAGATCAGCTGGCGG
ACACTCGAAAAAAGTTATCCGAAGTCAAAACGTTAATAGAGGGCTTAGAA
TGTGGGATGCCATCGGTACCGTCTTTCGCGCCTGCCCAGGTGTCTCAACA
CGTTGGTGCTGGGAGACAGACAGTGGATCATCACACAGCTACACCGAAAA
ATTAAAATTACTCGTATTGCACTAAAGAAAAAAAGTTGC
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protein sequence of rna1425

>rna1425-protein ID=rna1425-protein|Name=rna1425|organism=Nannochloropsis gaditana|type=polypeptide|length=128bp
MGNVSQSLRERYRTTFEDAVDEMSIAQKKEMHRDLQHQALLLLQLESEIL
RILRKLSEEEANLRRREEFLELRRRAYVKRLDTASVEEQKKKREEEEEEE
EEEEEEEEEEEEEEEEEEEEEEEEEVEW
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mRNA from alignment at CM002457.1:602576..604689-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna1425 ID=rna1425|Name=rna1425|organism=Nannochloropsis gaditana|type=mRNA|length=2114bp|location=Sequence derived from alignment at CM002457.1:602576..604689- (Nannochloropsis gaditana)
AGACCCGTCCAAAACGCCTGCCACTAGAGCACCCACACTGCCGCCCAGCG
AGAACCCCACGACATGAAGCGCGTAGCCGGGGCAAGTCTCCCTTAGAGCG
GTGGTCAGGACCGCTTTGACACGCTCGATGACAGTAACTGCCGCCGCCCA
TAGGCGTGGATTCACCATCATGGATCGGCGCAGGAGGCCTCGCGGACGCA
AGGGCACCGTCAGGGGGGGCGCTCGCAGGACATCGAGCCTCTGGGCCCAT
GTCAGGGAGTCACCCACGGAGAGCGTCAGTCTCCGGCTGTCTCGGTCCAC
AAGCAGAAGGAAGCGGAACGTTCCCCCTTCCACCGATAGAAAGTCCTCCG
CCAACACCTCCTGAGTGCTCTGCAGCTCTGATACCATCGTCAAGGCCTCT
CTTCGGCCCACTCCGTCCGCCGACAGCTCCGCTAGTTCCGAGCTATACAC
CGCCTCCTCCAGAAGTTTGGCCTTGCGGAATGCCTTGAGCCGCATCTCTT
TCTCAGCCTTGCTGGCCCGGCTGTACTCCAGCCGGCTCCAGGCCGTGACC
GGGGGCCGAGGGTGGCTGTAAGCGTAGAGGCTGTGCGCTGCCCCGTCCAT
GGTCTTGAGGGCTTGCTGGGAAGATGCCACCACCTGACAGCGTCCAGTAG
AAAGCACAAAGAACAAGAGGAAGAGGTGAGTCGAGATGCCGGTGCCGCAA
AAGCCTACTTGGCCGAGAGAGGAGGAAACAACCGGGCAGACGTTCAAACC
ATGGCACGCCGATGCGACAGCATCGTACGACAGCTTTGCCTCGATGCTGC
AGCTCGAAGTTCAACCAATACCCCCAAAAATTGAAGCACATAAATTTAAT
ATGCCCACTCACTTTGAAAGCCCGCTCGATATTGGGCGGGCCGGCGCCCT
TGAGGTCCGAGTCAGCGCTGCGGTCGAGCCACTCCGACAGGATTTGGAAG
GGGCTTGAGTCTGTCCATGGAGGATGAGAGGAGACGGCTCCCGCAGTCGA
TATAATCAAAATGACTCCAACAGCCACTTGCACGAGCGACGCCGACGATA
ATCCCGTCACGCGTGTAGATGAGAACCTCCCCCTCCGCCGCGCGCTGCTT
CGGCCCCCCAAGCCCTCCGCGTCTGTGATCCCTTCAGCGGCCACTTGCCG
CGCGACAAAGAGATTCCCTCCCCCGCGCCAGTGTTGGCTGTGCTTCATCG
CTGGGAGATTATTGCGAGTGGTTGAGGCCAGCTGTGAGTGAAGCAAAAGC
TGTGTCCAGGTGTCCCAGCGATGACGACCATCATTTCGCTCTCGCTGAGG
CGCGACTCTGATTGCACTAACTTCCATTCAGGCAAGCAAATTTATTCCCA
AAACAGCACGGAAAGCCAGCTCTGCGCGATCGTATGCATCGTAAGCCATG
GGAAACGTGAGCCAGTCACTGCGGGAAAGGTAGGTGATAAGGCTGTAGGA
TTCGCAAAACAAAGCACCATGCTACTATAGGGTCATGGGCCGACTGACAT
TCTCTCACTTTTGGCTATGTTTTAAGTCGTTTAGCAACCCAAAAAATCAA
TTCTACACAAATCAGGTATAGGACGACTTTCGAAGACGCTGTTGACGAAA
TGTCGATCGCTCAAAAGAAAGAAATGCACAGAGACTTGCAGCATCAGGTA
GATCAAGCATTCCCCCGTGTTTTTTTCTTGTCCTCATATTTATATGCGAG
TATACGCCCTTTCTTCTCAAAGGCTTTATTACTTCTCCAACTTGAGAGCG
AGATCTTGCGAATTCTGAGAAAATTATCAGAGGAAGAAGCCAATCTGAGG
AGACGCGAGGTAGGAGAGTTTCCCAAATTACCTCATCTCTTCTAGGGACC
CGCTTCCATGATTTGTGACGAGTGATTATCCTTCATGATATCTCCTCAAG
TACCCTTTGCGATGTTTCCGCCCAATAGGAGTTTCTTGAGCTTCGGCGCC
GGGCTTACGTAAAGCGCCTTGATACCGCATCCGTCGAGGAGCAGAAGAAA
AAGAGGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGA
GGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGG
AGGTGGAGTGGTAG
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Coding sequence (CDS) from alignment at CM002457.1:602576..604689-

>rna1425 ID=rna1425|Name=rna1425|organism=Nannochloropsis gaditana|type=CDS|length=1548bp|location=Sequence derived from alignment at CM002457.1:602576..604689- (Nannochloropsis gaditana)
GAGTTTCTTGAGCTTCGGCGCCGGGCTTACGTAAAGCGCCTTGATACCGC
ATCCGTCGAGGAGCAGAAGAAAAAGAGGGAGGAGGAGGAGGAGGAGGAGG
AGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAG
GAGGAGGAGGAGGAGGAGGAGGAGGTGGAGTGGTAGGCTTTATTACTTCT
CCAACTTGAGAGCGAGATCTTGCGAATTCTGAGAAAATTATCAGAGGAAG
AAGCCAATCTGAGGAGACGCGAGGTATAGGACGACTTTCGAAGACGCTGT
TGACGAAATGTCGATCGCTCAAAAGAAAGAAATGCACAGAGACTTGCAGC
ATCAGATGGGAAACGTGAGCCAGTCACTGCGGGAAAGGAGTTTCTTGAGC
TTCGGCGCCGGGCTTACGTAAAGCGCCTTGATACCGCATCCGTCGAGGAG
CAGAAGAAAAAGAGGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGA
GGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGG
AGGAGGAGGAGGTGGAGTGGTAGGCTTTATTACTTCTCCAACTTGAGAGC
GAGATCTTGCGAATTCTGAGAAAATTATCAGAGGAAGAAGCCAATCTGAG
GAGACGCGAGGTATAGGACGACTTTCGAAGACGCTGTTGACGAAATGTCG
ATCGCTCAAAAGAAAGAAATGCACAGAGACTTGCAGCATCAGATGGGAAA
CGTGAGCCAGTCACTGCGGGAAAGGAGTTTCTTGAGCTTCGGCGCCGGGC
TTACGTAAAGCGCCTTGATACCGCATCCGTCGAGGAGCAGAAGAAAAAGA
GGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAG
GAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGT
GGAGTGGTAGGCTTTATTACTTCTCCAACTTGAGAGCGAGATCTTGCGAA
TTCTGAGAAAATTATCAGAGGAAGAAGCCAATCTGAGGAGACGCGAGGTA
TAGGACGACTTTCGAAGACGCTGTTGACGAAATGTCGATCGCTCAAAAGA
AAGAAATGCACAGAGACTTGCAGCATCAGATGGGAAACGTGAGCCAGTCA
CTGCGGGAAAGGAGTTTCTTGAGCTTCGGCGCCGGGCTTACGTAAAGCGC
CTTGATACCGCATCCGTCGAGGAGCAGAAGAAAAAGAGGGAGGAGGAGGA
GGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGG
AGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGTGGAGTGGTAGGCT
TTATTACTTCTCCAACTTGAGAGCGAGATCTTGCGAATTCTGAGAAAATT
ATCAGAGGAAGAAGCCAATCTGAGGAGACGCGAGGTATAGGACGACTTTC
GAAGACGCTGTTGACGAAATGTCGATCGCTCAAAAGAAAGAAATGCACAG
AGACTTGCAGCATCAGATGGGAAACGTGAGCCAGTCACTGCGGGAAAG
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Synonyms
Publications