EWM29359.1, cds1314 (CDS) Nannochloropsis gaditana

Overview
NameEWM29359.1
Unique Namecds1314
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002457.1:314807..317017 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM29359.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100028g36.3295.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002457.1supercontigCM002457.1:314807..317017 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR001478PDZ
Homology
BLAST of EWM29359.1 vs. NCBI_GenBank
Match: gi|585111887|gb|EWM29359.1| (hypothetical protein Naga_100028g36 [Nannochloropsis gaditana])

HSP 1 Score: 1504.96 bits (3895), Expect = 0.000e+0
Identity = 736/736 (100.00%), Postives = 736/736 (100.00%), Query Frame = 0
Query:    1 MTLWTSPVPMHMAGKQVTAPRMETAVQDGEPSNTVSVVLASGAGDGAGSNLGSGASNNFTHSNSSASGSTTSTAPHQRRQTLANVPSAAEVHGRQEKWLEFAPTSPQRRASFVDEPGVVDGNPFEIFKEPARADHFGSQSFYEAGASYSAKQHAPPPSAASSVVSRPASATRLTASSIPLGPERLDSSYRPSSSTGNPFCEAPLSPIRYNKPIAKVELSPQSTALSAVAFSALDPLKRTESPTASVPLDQLKISAYNREQEVLAAAKAAEEQGKQFQESEHYRRQLQLQQPQPTAHFQQNLPQPQGQAEQPHPQQGDWSAWPMQQGVLQAASQAQPASSTEWDAFGASPTVFPQKAPPSQPTFDNNFGWQSIPGAFTTTTPNSDDFRVLGGHAAGGGEDGGEGKRGGGAIFDPVRQKSLADASFDLSVGGFFPEEPTGAHTNAGTGSRRSSGAGHAEEEEEEGGLEDHAEEEDDDSMGGDGTGELEMQEEHFGEGGSGLEGRQRSASGMYYEVAFTAPTTFGMLLERKDEWVRGSVARRERTVVTLVVEGGEAEAKGVAVGSMIVSINGEEVTGLTYKETLERIKGQARPMQVVFERESLNEDVLQGYFFVSKGPFFSNPTTMDKWKRKYIVLGGPIAKKNVLQIYDSKRAYHNTVVALFQRKRPSHRVKTYALTYAFKLSQLQERRMDGHTAPLKFFAFMTPAARFKSVRIASETRKSVQGLQERFSRFAGKSTR 736
            MTLWTSPVPMHMAGKQVTAPRMETAVQDGEPSNTVSVVLASGAGDGAGSNLGSGASNNFTHSNSSASGSTTSTAPHQRRQTLANVPSAAEVHGRQEKWLEFAPTSPQRRASFVDEPGVVDGNPFEIFKEPARADHFGSQSFYEAGASYSAKQHAPPPSAASSVVSRPASATRLTASSIPLGPERLDSSYRPSSSTGNPFCEAPLSPIRYNKPIAKVELSPQSTALSAVAFSALDPLKRTESPTASVPLDQLKISAYNREQEVLAAAKAAEEQGKQFQESEHYRRQLQLQQPQPTAHFQQNLPQPQGQAEQPHPQQGDWSAWPMQQGVLQAASQAQPASSTEWDAFGASPTVFPQKAPPSQPTFDNNFGWQSIPGAFTTTTPNSDDFRVLGGHAAGGGEDGGEGKRGGGAIFDPVRQKSLADASFDLSVGGFFPEEPTGAHTNAGTGSRRSSGAGHAEEEEEEGGLEDHAEEEDDDSMGGDGTGELEMQEEHFGEGGSGLEGRQRSASGMYYEVAFTAPTTFGMLLERKDEWVRGSVARRERTVVTLVVEGGEAEAKGVAVGSMIVSINGEEVTGLTYKETLERIKGQARPMQVVFERESLNEDVLQGYFFVSKGPFFSNPTTMDKWKRKYIVLGGPIAKKNVLQIYDSKRAYHNTVVALFQRKRPSHRVKTYALTYAFKLSQLQERRMDGHTAPLKFFAFMTPAARFKSVRIASETRKSVQGLQERFSRFAGKSTR
Sbjct:    1 MTLWTSPVPMHMAGKQVTAPRMETAVQDGEPSNTVSVVLASGAGDGAGSNLGSGASNNFTHSNSSASGSTTSTAPHQRRQTLANVPSAAEVHGRQEKWLEFAPTSPQRRASFVDEPGVVDGNPFEIFKEPARADHFGSQSFYEAGASYSAKQHAPPPSAASSVVSRPASATRLTASSIPLGPERLDSSYRPSSSTGNPFCEAPLSPIRYNKPIAKVELSPQSTALSAVAFSALDPLKRTESPTASVPLDQLKISAYNREQEVLAAAKAAEEQGKQFQESEHYRRQLQLQQPQPTAHFQQNLPQPQGQAEQPHPQQGDWSAWPMQQGVLQAASQAQPASSTEWDAFGASPTVFPQKAPPSQPTFDNNFGWQSIPGAFTTTTPNSDDFRVLGGHAAGGGEDGGEGKRGGGAIFDPVRQKSLADASFDLSVGGFFPEEPTGAHTNAGTGSRRSSGAGHAEEEEEEGGLEDHAEEEDDDSMGGDGTGELEMQEEHFGEGGSGLEGRQRSASGMYYEVAFTAPTTFGMLLERKDEWVRGSVARRERTVVTLVVEGGEAEAKGVAVGSMIVSINGEEVTGLTYKETLERIKGQARPMQVVFERESLNEDVLQGYFFVSKGPFFSNPTTMDKWKRKYIVLGGPIAKKNVLQIYDSKRAYHNTVVALFQRKRPSHRVKTYALTYAFKLSQLQERRMDGHTAPLKFFAFMTPAARFKSVRIASETRKSVQGLQERFSRFAGKSTR 736          
BLAST of EWM29359.1 vs. NCBI_GenBank
Match: gi|298710824|emb|CBJ26333.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 175.252 bits (443), Expect = 5.025e-44
Identity = 91/220 (41.36%), Postives = 128/220 (58.18%), Query Frame = 0
Query:  511 YEVAFTAPTTFGMLLERKDEWVRGSVARRERTVVTLVVEGGEAEAKGVAVGSMIVSINGEEVTGLTYKETLERIKGQARPMQVVFERESLNEDVLQGYFFVSKGPFFSNPTTMDKWKRKYIVLGGPIAKKNVLQIYDSKRAYHNTVVALFQRKRPSHRVKTYALTYAFKLSQLQERRMDGHTAPLKFFAFMTPAARFKSVRIASETRKSVQGLQERFSRF 730
            Y V F      GMLLER DEW  G   R ER +V +VV+ G A+ +GV VGS +  +NG+ V GLTY++TLE IK  ARP++V FER  L ++   G     K      P +   W+R+Y VLGG +AK +VLQ+Y SK++Y   V+A+F+ +R + RVK Y L+  FK   ++ +   GH  PL FF    P +R K +  AS+    +Q L+   S+F
Sbjct:  248 YIVEFERARKLGMLLERHDEWPDGREKRSERAIVKMVVDSGPAKIRGVTVGSKVKRVNGDTVEGLTYQQTLECIKNAARPLRVEFERGQLEQEDNVGQILFKKT--VGVPRSYSAWQRRYFVLGGAVAKVHVLQVYVSKQSYDRMVLAVFENRRINERVKAYKLSNLFKCGPIKVKSFKGHPTPLYFFTVKLPKSRLKQLNFASQNLGDLQHLRTSISKF 465          
BLAST of EWM29359.1 vs. NCBI_GenBank
Match: gi|1173947868|gb|OQR96042.1| (hypothetical protein ACHHYP_17196 [Achlya hypogyna])

HSP 1 Score: 137.117 bits (344), Expect = 2.117e-30
Identity = 77/217 (35.48%), Postives = 126/217 (58.06%), Query Frame = 0
Query:  511 YEVAFTAPTTFGMLLERKDEWVRGSVARRERTVVTLVVEGGEAEAKGVAVGSMIVSINGEEVTGLTYKETLERIKGQARPMQVVFERESLNEDVLQGYFF--VSKGPF-FSNPTTMD-KWKRKYIVLGGPIAKKNVLQIYDSKRAYHNTVVALFQRKRPSHRVKTYALTYAFKLSQLQERRMDGHTAPLKFFAFMTPAARFKSVRIASETRKSVQGL 723
            YEV F + +  G+L+ER D + + +  +RE  VV LVVEGG A+  GV VGS+I  IN +++   +Y  TL+ IK   RPM +  +  S  ++V QG     +S G F   N T+ + KW  KY   GG  AK +VLQ++ S+ AYH  V+AL++++  S  ++++ L    KLS ++ +   G+   L +F+   P+ RF + + ASE  ++++ +
Sbjct:  306 YEVIFESGSKLGVLMERVDTYAKDTRQKRELAVVKLVVEGGAADRIGVKVGSIIRGINDQDLMYESYNTTLDLIKTAPRPMTIRLKDRSETKEVTQGAVLTRISNGTFSVGNLTSGNAKWDSKYFAFGG--AKMDVLQLFVSRAAYHECVIALYEKRHVSTPIQSFRLCRDHKLSPIKSKIYKGY-GNLHYFSLTVPSLRFIAAKFASENYETIKTM 519          
BLAST of EWM29359.1 vs. NCBI_GenBank
Match: gi|1173959409|gb|OQS05647.1| (cleavage induced hypothetical protein [Thraustotheca clavata])

HSP 1 Score: 134.806 bits (338), Expect = 8.010e-30
Identity = 77/217 (35.48%), Postives = 123/217 (56.68%), Query Frame = 0
Query:  511 YEVAFTAPTTFGMLLERKDEWVRGSVARRERTVVTLVVEGGEAEAKGVAVGSMIVSINGEEVTGLTYKETLERIKGQARPMQVVFERESLNEDVLQGYFF--VSKGPF-FSNPTTMD-KWKRKYIVLGGPIAKKNVLQIYDSKRAYHNTVVALFQRKRPSHRVKTYALTYAFKLSQLQERRMDGHTAPLKFFAFMTPAARFKSVRIASETRKSVQGL 723
            YEV F   +  G+L+ER D + + +  +RE  VV LVVEGG A+  GV VGS+I  IN  ++   +Y   LE IK   RPM +  +  S  ++V QG     +S G F   N T+ + KW  KY   GG  AK +VLQ++ S+ AYH  V+AL++++  S  ++++ L    KLS ++ +   G+   L +F+   P+ RF + + ASE  ++++ +
Sbjct:  268 YEVIFEYGSKLGVLMERVDTYAKDTRQKRELAVVKLVVEGGAADRIGVKVGSVIRGINDRDMAYESYNTVLELIKTVPRPMTIRLQDRSETKEVTQGNVLTRISNGTFSVGNLTSGNAKWDSKYFAFGG--AKMDVLQLFVSRAAYHECVIALYEKRHVSTLIQSFRLCRDHKLSPIKSKIYKGY-GNLHYFSLTVPSLRFIAAKFASENYETIKTM 481          
BLAST of EWM29359.1 vs. NCBI_GenBank
Match: gi|669150540|ref|XP_008610832.1| (hypothetical protein SDRG_06805 [Saprolegnia diclina VS20] >gi|530737828|gb|EQC36070.1| hypothetical protein SDRG_06805 [Saprolegnia diclina VS20])

HSP 1 Score: 134.035 bits (336), Expect = 2.261e-29
Identity = 76/217 (35.02%), Postives = 123/217 (56.68%), Query Frame = 0
Query:  511 YEVAFTAPTTFGMLLERKDEWVRGSVARRERTVVTLVVEGGEAEAKGVAVGSMIVSINGEEVTGLTYKETLERIKGQARPMQVVFERESLNEDVLQGYFF--VSKGPF-FSNPTTMD-KWKRKYIVLGGPIAKKNVLQIYDSKRAYHNTVVALFQRKRPSHRVKTYALTYAFKLSQLQERRMDGHTAPLKFFAFMTPAARFKSVRIASETRKSVQGL 723
            YEV F   +  G+L+ER D + + +  +RE  VV LVVEGG A+  GV VGS+I  IN  ++   +Y   L+ IK   RPM +  +  S  ++V QG     +S G F   N T+ + KW  KY   GG  AK +VLQ++ S+ AYH  V+AL++++  S  ++++ L    KLS ++ +   G+   L +F+   P+ RF + + ASE  ++++ +
Sbjct:  305 YEVIFEFGSKLGVLMERVDTYSKDTRQKRELAVVKLVVEGGAADRIGVKVGSIIRGINDRDLMYESYNTVLDLIKTAPRPMTIRLKDRSETKEVTQGAVLTRISNGTFSVGNLTSGNAKWDSKYFAFGG--AKMDVLQLFVSRAAYHECVIALYEKRHVSTPIQSFRLCRDHKLSPIKSKIYKGYGN-LHYFSLTVPSLRFIAAKFASENYETIKTM 518          
BLAST of EWM29359.1 vs. NCBI_GenBank
Match: gi|970650009|gb|KUF89139.1| (hypothetical protein AM588_10002078 [Phytophthora nicotianae])

HSP 1 Score: 132.494 bits (332), Expect = 4.176e-29
Identity = 74/217 (34.10%), Postives = 124/217 (57.14%), Query Frame = 0
Query:  511 YEVAFTAPTTFGMLLERKDEWVRGSVARRERTVVTLVVEGGEAEAKGVAVGSMIVSINGEEVTGLTYKETLERIKGQARPMQVVFERESLNEDVLQGYFF--VSKGPF-FSNPTTMD-KWKRKYIVLGGPIAKKNVLQIYDSKRAYHNTVVALFQRKRPSHRVKTYALTYAFKLSQLQERRMDGHTAPLKFFAFMTPAARFKSVRIASETRKSVQGL 723
            Y+V F +    G+L+ER D W   +  R+E  VV LVVE G A+  GV++GS +V+IN + V   TY   LE IK   RP+++ F+R S N+D  QG     +S G F   N T+ +  W  KY   GG  +K +VLQ++ S+ AYH  V+AL++++    +++++ L    K+S ++ +   G+   L +F+   P+ RF + + AS+   +++ +
Sbjct:  263 YDVRFESGRKLGVLMERVDVW-NAANQRKETAVVKLVVENGAADRVGVSIGSTVVAINRKSVENETYVAILEMIKAAPRPLRMRFQRGSQNKDTTQGTILTRISNGTFSVGNLTSGNATWTTKYFAFGG--SKMDVLQLFVSRAAYHECVIALYEKRGVHTQIQSFRLCRDHKISPIKSKIYKGY-GNLHYFSLSVPSLRFVAAKFASDDYATIKNI 475          
BLAST of EWM29359.1 vs. NCBI_GenBank
Match: gi|675193081|ref|XP_008905425.1| (hypothetical protein PPTG_11925 [Phytophthora parasitica INRA-310] >gi|567990256|gb|ETL40488.1| hypothetical protein L916_08338 [Phytophthora parasitica] >gi|568094816|gb|ETN09592.1| hypothetical protein PPTG_11925 [Phytophthora parasitica INRA-310])

HSP 1 Score: 132.494 bits (332), Expect = 9.112e-29
Identity = 74/217 (34.10%), Postives = 124/217 (57.14%), Query Frame = 0
Query:  511 YEVAFTAPTTFGMLLERKDEWVRGSVARRERTVVTLVVEGGEAEAKGVAVGSMIVSINGEEVTGLTYKETLERIKGQARPMQVVFERESLNEDVLQGYFF--VSKGPF-FSNPTTMD-KWKRKYIVLGGPIAKKNVLQIYDSKRAYHNTVVALFQRKRPSHRVKTYALTYAFKLSQLQERRMDGHTAPLKFFAFMTPAARFKSVRIASETRKSVQGL 723
            Y+V F +    G+L+ER D W   +  R+E  VV LVVE G A+  GV++GS +V+IN + V   TY   LE IK   RP+++ F+R S N+D  QG     +S G F   N T+ +  W  KY   GG  +K +VLQ++ S+ AYH  V+AL++++    +++++ L    K+S ++ +   G+   L +F+   P+ RF + + AS+   +++ +
Sbjct:  336 YDVRFESGRKLGVLMERVDVW-NAANQRKETAVVKLVVENGAADRVGVSIGSTVVAINRKSVENETYVAILEMIKAAPRPLRMRFQRGSQNKDTTQGTILTRISNGTFSVGNLTSGNATWTTKYFAFGG--SKMDVLQLFVSRAAYHECVIALYEKRGVHTQIQSFRLCRDHKISPIKSKIYKGY-GNLHYFSLSVPSLRFVAAKFASDDYATIKNI 548          
BLAST of EWM29359.1 vs. NCBI_GenBank
Match: gi|970663017|gb|KUG00295.1| (hypothetical protein AM587_10008759 [Phytophthora nicotianae])

HSP 1 Score: 132.494 bits (332), Expect = 9.451e-29
Identity = 74/217 (34.10%), Postives = 124/217 (57.14%), Query Frame = 0
Query:  511 YEVAFTAPTTFGMLLERKDEWVRGSVARRERTVVTLVVEGGEAEAKGVAVGSMIVSINGEEVTGLTYKETLERIKGQARPMQVVFERESLNEDVLQGYFF--VSKGPF-FSNPTTMD-KWKRKYIVLGGPIAKKNVLQIYDSKRAYHNTVVALFQRKRPSHRVKTYALTYAFKLSQLQERRMDGHTAPLKFFAFMTPAARFKSVRIASETRKSVQGL 723
            Y+V F +    G+L+ER D W   +  R+E  VV LVVE G A+  GV++GS +V+IN + V   TY   LE IK   RP+++ F+R S N+D  QG     +S G F   N T+ +  W  KY   GG  +K +VLQ++ S+ AYH  V+AL++++    +++++ L    K+S ++ +   G+   L +F+   P+ RF + + AS+   +++ +
Sbjct:  336 YDVRFESGRKLGVLMERVDVW-NAANQRKETAVVKLVVENGAADRVGVSIGSTVVAINRKSVENETYVAILEMIKAAPRPLRMRFQRGSQNKDTTQGTILTRISNGTFSVGNLTSGNATWTTKYFAFGG--SKMDVLQLFVSRAAYHECVIALYEKRGVHTQIQSFRLCRDHKISPIKSKIYKGY-GNLHYFSLSVPSLRFVAAKFASDDYATIKNI 548          
BLAST of EWM29359.1 vs. NCBI_GenBank
Match: gi|570327886|gb|ETO75834.1| (hypothetical protein F444_08652 [Phytophthora parasitica P1976])

HSP 1 Score: 132.109 bits (331), Expect = 1.035e-28
Identity = 74/217 (34.10%), Postives = 124/217 (57.14%), Query Frame = 0
Query:  511 YEVAFTAPTTFGMLLERKDEWVRGSVARRERTVVTLVVEGGEAEAKGVAVGSMIVSINGEEVTGLTYKETLERIKGQARPMQVVFERESLNEDVLQGYFF--VSKGPF-FSNPTTMD-KWKRKYIVLGGPIAKKNVLQIYDSKRAYHNTVVALFQRKRPSHRVKTYALTYAFKLSQLQERRMDGHTAPLKFFAFMTPAARFKSVRIASETRKSVQGL 723
            Y+V F +    G+L+ER D W   +  R+E  VV LVVE G A+  GV++GS +V+IN + V   TY   LE IK   RP+++ F+R S N+D  QG     +S G F   N T+ +  W  KY   GG  +K +VLQ++ S+ AYH  V+AL++++    +++++ L    K+S ++ +   G+   L +F+   P+ RF + + AS+   +++ +
Sbjct:  336 YDVRFESGRKLGVLMERVDVW-NAANQRKETAVVKLVVENGAADRVGVSIGSTVVAINRKSVENETYVAILEMIKAAPRPLRMRFQRGSQNKDTTQGTILTRISNGTFSVGNLTSGNATWTTKYFAFGG--SKMDVLQLFVSRAAYHECVIALYEKRGVHTQIQSFRLCRDHKISPIKSKIYKGY-GNLHYFSLSVPSLRFVAAKFASDDYATIKNI 548          
BLAST of EWM29359.1 vs. NCBI_GenBank
Match: gi|568019492|gb|ETL93637.1| (hypothetical protein L917_08245 [Phytophthora parasitica])

HSP 1 Score: 132.109 bits (331), Expect = 1.177e-28
Identity = 74/217 (34.10%), Postives = 124/217 (57.14%), Query Frame = 0
Query:  511 YEVAFTAPTTFGMLLERKDEWVRGSVARRERTVVTLVVEGGEAEAKGVAVGSMIVSINGEEVTGLTYKETLERIKGQARPMQVVFERESLNEDVLQGYFF--VSKGPF-FSNPTTMD-KWKRKYIVLGGPIAKKNVLQIYDSKRAYHNTVVALFQRKRPSHRVKTYALTYAFKLSQLQERRMDGHTAPLKFFAFMTPAARFKSVRIASETRKSVQGL 723
            Y+V F +    G+L+ER D W   +  R+E  VV LVVE G A+  GV++GS +V+IN + V   TY   LE IK   RP+++ F+R S N+D  QG     +S G F   N T+ +  W  KY   GG  +K +VLQ++ S+ AYH  V+AL++++    +++++ L    K+S ++ +   G+   L +F+   P+ RF + + AS+   +++ +
Sbjct:  336 YDVRFESGHKLGVLMERVDVW-NAANQRKETAVVKLVVENGAADRVGVSIGSTVVAINRKSVENETYVAILEMIKAAPRPLRMRFQRGSQNKDTTQGTILTRISNGTFSVGNLTSGNATWTTKYFAFGG--SKMDVLQLFVSRAAYHECVIALYEKRGVHTQIQSFRLCRDHKISPIKSKIYKGY-GNLHYFSLSVPSLRFVAAKFASDDYATIKNI 548          
The following BLAST results are available for this feature:
BLAST of EWM29359.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585111887|gb|EWM29359.1|0.000e+0100.00hypothetical protein Naga_100028g36 [Nannochlorops... [more]
gi|298710824|emb|CBJ26333.1|5.025e-4441.36conserved unknown protein [Ectocarpus siliculosus][more]
gi|1173947868|gb|OQR96042.1|2.117e-3035.48hypothetical protein ACHHYP_17196 [Achlya hypogyna... [more]
gi|1173959409|gb|OQS05647.1|8.010e-3035.48cleavage induced hypothetical protein [Thraustothe... [more]
gi|669150540|ref|XP_008610832.1|2.261e-2935.02hypothetical protein SDRG_06805 [Saprolegnia dicli... [more]
gi|970650009|gb|KUF89139.1|4.176e-2934.10hypothetical protein AM588_10002078 [Phytophthora ... [more]
gi|675193081|ref|XP_008905425.1|9.112e-2934.10hypothetical protein PPTG_11925 [Phytophthora para... [more]
gi|970663017|gb|KUG00295.1|9.451e-2934.10hypothetical protein AM587_10008759 [Phytophthora ... [more]
gi|570327886|gb|ETO75834.1|1.035e-2834.10hypothetical protein F444_08652 [Phytophthora para... [more]
gi|568019492|gb|ETL93637.1|1.177e-2834.10hypothetical protein L917_08245 [Phytophthora para... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna1316rna1316Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications