EWM29466.1, cds1207 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM29466.1 vs. NCBI_GenBank
Match: gi|585112004|gb|EWM29466.1| (Phosphatidylethanolamine-binding protein PEBP [Nannochloropsis gaditana]) HSP 1 Score: 810.061 bits (2091), Expect = 0.000e+0 Identity = 391/391 (100.00%), Postives = 391/391 (100.00%), Query Frame = 0 Query: 1 MHNLGSKMTKLKHKALTVSQELSAAGLIPDVLPDDFRSAYSVNATFGCNNFDSGAKVPPGEMDHPHPVYKLIEARHGSYYTFILVDPDSSPMQGSRSEVQLLHLVTNVSGQQPDSRNGNEVVPYKISRQDQGHIHGTHRYLLIALEQPQEGQQQLHIAPPKYRTQFSVLNFIHMNKVKPVGATLLHVSWDDYRPSKSNSTNAQAREQDSLAYAESMVRKSKLLNELVLEGSVHFKVPVTLTINEEIVNAGDEVPAQVMDLAPVVQFHPGLEEVRKANALYTVICADADFPSIHQPTDRSMLLMLATNIPGTSGDSRIGDPVVPYVSPLRLAGSTGIHRYFVLLLEQHGGALEEGAIDPPENRRAFSFHDFLKTHTSLEAVNATFFLGRRKG 391 MHNLGSKMTKLKHKALTVSQELSAAGLIPDVLPDDFRSAYSVNATFGCNNFDSGAKVPPGEMDHPHPVYKLIEARHGSYYTFILVDPDSSPMQGSRSEVQLLHLVTNVSGQQPDSRNGNEVVPYKISRQDQGHIHGTHRYLLIALEQPQEGQQQLHIAPPKYRTQFSVLNFIHMNKVKPVGATLLHVSWDDYRPSKSNSTNAQAREQDSLAYAESMVRKSKLLNELVLEGSVHFKVPVTLTINEEIVNAGDEVPAQVMDLAPVVQFHPGLEEVRKANALYTVICADADFPSIHQPTDRSMLLMLATNIPGTSGDSRIGDPVVPYVSPLRLAGSTGIHRYFVLLLEQHGGALEEGAIDPPENRRAFSFHDFLKTHTSLEAVNATFFLGRRKG Sbjct: 1 MHNLGSKMTKLKHKALTVSQELSAAGLIPDVLPDDFRSAYSVNATFGCNNFDSGAKVPPGEMDHPHPVYKLIEARHGSYYTFILVDPDSSPMQGSRSEVQLLHLVTNVSGQQPDSRNGNEVVPYKISRQDQGHIHGTHRYLLIALEQPQEGQQQLHIAPPKYRTQFSVLNFIHMNKVKPVGATLLHVSWDDYRPSKSNSTNAQAREQDSLAYAESMVRKSKLLNELVLEGSVHFKVPVTLTINEEIVNAGDEVPAQVMDLAPVVQFHPGLEEVRKANALYTVICADADFPSIHQPTDRSMLLMLATNIPGTSGDSRIGDPVVPYVSPLRLAGSTGIHRYFVLLLEQHGGALEEGAIDPPENRRAFSFHDFLKTHTSLEAVNATFFLGRRKG 391
BLAST of EWM29466.1 vs. NCBI_GenBank
Match: gi|969466328|ref|XP_001358906.3| (uncharacterized protein Dpse_GA14723 [Drosophila pseudoobscura pseudoobscura] >gi|950765779|gb|EAL28049.3| uncharacterized protein Dpse_GA14723 [Drosophila pseudoobscura pseudoobscura]) HSP 1 Score: 85.8853 bits (211), Expect = 9.165e-15 Identity = 98/340 (28.82%), Postives = 154/340 (45.29%), Query Frame = 0 Query: 27 LIPDVL---PDDFRSAYSVNATF-GCNNFDSGAKVPPGEM-DHPHPVYKLIEARHGSYYTFILVDPDSSPMQGSRSEVQLLHLVTNVSGQQ---PDSRNGNEVVPYKISRQDQGHIHGTHRYLLIALEQPQEGQQQLHIAPPKY----RTQFSVLNFIHMNKVK-PVGATLLHVSWDDYRPSKSNSTNAQAREQDSL-AYAESMVRKSKLLNELVLEG-SVHFKVPVTLTINE----EIVNAGDEVPAQVMDLAPV-VQFHPGLEEVRKANALYTVICADADFPSIHQPTDRSMLLMLATNIPGTSGDSRIGDPVVPYVSPLRLAGSTGIHRYFVLLLEQ 346 +IPDV+ P +F +N T+ G D G ++ P ++ D P+ + A +YYT +++DPD+ Q + +L +V N+ G Q D R G V P S G HRY+ + Q Q+ + PK+ R+ F + F K+ PV + SW P+ NS + A+++ +L +++ ++SK+ + E + H VP + + ++ G V + +L P V+ P +E + ALYT+I D D PS QP R L NIPGT GD + YV G TG+HRY LL +Q Sbjct: 35 VIPDVIEAGPQEF-----LNVTYLGFIQADRGVELQPMQVRDEPYVAW---NAPMTNYYTLLMIDPDAPSTQQPSAREKLHWMVLNIPGNQLIMGDVRAGY-VGPTPASGS------GLHRYVFLLYRQ-QDYTKFDFPRLPKHILTGRSNFRSMQFAKRYKLGYPVAGNVFTASWSTDVPALYNSISRGAKQKITLLETKQNISKRSKMSSSEAAECFAKHEIVPDVVPVGPNQLLKVTYGGGVVVDKGAELTPTQVKAQPNVEWDAEPEALYTLILTDPDAPSRKQPKFREWHHWLVVNIPGTQIAK--GDVLSEYVGAGPPEG-TGLHRYVFLLFKQ 355
BLAST of EWM29466.1 vs. NCBI_GenBank
Match: gi|1037099374|ref|XP_017144696.1| (PREDICTED: uncharacterized protein LOC108157238 [Drosophila miranda] >gi|1037099385|ref|XP_017144697.1| PREDICTED: uncharacterized protein LOC108157238 [Drosophila miranda]) HSP 1 Score: 80.4925 bits (197), Expect = 5.846e-13 Identity = 95/340 (27.94%), Postives = 153/340 (45.00%), Query Frame = 0 Query: 27 LIPDVL---PDDFRSAYSVNATF-GCNNFDSGAKVPPGEM-DHPHPVYKLIEARHGSYYTFILVDPDSSPMQGSRSEVQLLHLVTNVSGQQ---PDSRNGNEVVPYKISRQDQGHIHGTHRYLLIALEQPQEGQQQLHIAPPKY----RTQFSVLNFIHMNKVK-PVGATLLHVSWDDYRPSKSNSTNAQAREQDSL-AYAESMVRKSKLLNELVLEG-SVHFKVPVTLTINE----EIVNAGDEVPAQVMDLAPV-VQFHPGLEEVRKANALYTVICADADFPSIHQPTDRSMLLMLATNIPGTSGDSRIGDPVVPYVSPLRLAGSTGIHRYFVLLLEQ 346 +IPDV+ P +F +N T+ G D G ++ P ++ D P+ + A +YYT +++DPD+ Q + +L +V N+ G Q D R G V P S G HR++ + Q Q+ + PK+ R+ F + F K+ PV + +W P+ +S + A+++ L +++ ++SK+ + E + H VP + + ++ G V + +L P V+ P +E + ALYT+I D D PS QP R L NIPGT GD + YV G TG+HRY LL +Q Sbjct: 35 VIPDVIEAGPQEF-----LNVTYLGFIQADRGVELQPMQVRDEPYVAW---NAPMTNYYTLLMIDPDAPSTQQPSAREKLHWMVLNIPGNQLIMGDVRAGY-VGPTPASGS------GLHRFIFLLYRQ-QDYTKFDFPRLPKHILTGRSNFRSMQFAKRYKLGYPVAGNVFTATWSTDVPALYDSISRGAKQKIPLLETKQNISKRSKMSSSEAAECFAKHEIVPDVIPVGPNKLLKVTYGGGLVVDKGGELTPTQVKAQPNVEWDAEPEALYTLILTDPDAPSRKQPKFREWHHWLVVNIPGTQIAK--GDVLSEYVGAGPPEG-TGLHRYVFLLFKQ 355
BLAST of EWM29466.1 vs. NCBI_GenBank
Match: gi|1101392309|ref|XP_018909050.1| (PREDICTED: uncharacterized protein LOC109038462 [Bemisia tabaci] >gi|1101392311|ref|XP_018909051.1| PREDICTED: uncharacterized protein LOC109038462 [Bemisia tabaci]) HSP 1 Score: 79.337 bits (194), Expect = 1.625e-12 Identity = 93/373 (24.93%), Postives = 149/373 (39.95%), Query Frame = 0 Query: 17 TVSQELSAAGLIPDVLPDDFRSAYSVNATFGC-NNFDSGAKVPPGEMDHPHPVYKLIEARHGSYYTFILVDPDSSPMQGSRSEVQLLHLVTNVSGQQPDSRNGNEVVPYKISRQDQGHIHGTHRYLLIALEQP----QEGQQQLHIAPPKYRTQFSVLNFIHMNKV-KPVGATLLHVSW-DDYRPSKSNSTNAQAREQDSL--AYAESMVRKSKLLNELVLEGSVHFKVPVTLTINEEIVNAGDEV-PAQVMDLAPVVQFHPGLEEVRKANALYTVICADADFPSIHQPTDRSMLLMLATNIPGTSGDSRIGDPVVPYVSPLRLAGSTGIHRYFVLLLEQHGGALEEGAIDPPENRRAFSFHDFLKTHTSLEA 379 T+ Q+++ G+IPDV+ R+ +V + NF + K P D + A YYT IL DPDS ++ LL LV N+ G D ++G+ +V Y R D G G+HR++ + +QP + ++ + R FS F ++ P + H W D + + N + R ++ + A+ E + L + V FK + N G+ + P+Q Q P L+ + Y VI D D P R L + NIP S D GD + Y+ P +TG HRY + Q ++ FH+ L+ + LE+ Sbjct: 37 TMQQQITKHGIIPDVITMQPRNHITVEYSKKVVANFGNKLKTP----DLKKKPWLQWSADPELYYTLILTDPDSPSRAEPKNREWLLWLVVNIPGF--DVKSGDTIVDY--MRPDAGKGTGSHRFIFLTYQQPSVIYNFNETKVSSREHEGRANFSTQKFCDKYRLGSPWASNFFHAEWFDKEKDAIENHPGIKKRRKEEMKEAFIEHGLIPHYLHGLPRRDLQVEFK-------GGKKANFGNVLKPSQ-------TQQTPYLQWSADPDHYYAVIMIDFDAPDAEHHAWREWLHWMVVNIP--SFDVEAGDILTQYLGP-NPGANTGFHRYIFTVFSQGNDTIK--------------FHEPLRVRSDLES 370
BLAST of EWM29466.1 vs. NCBI_GenBank
Match: gi|585112503|gb|EWM29920.1| (tf1-like protein [Nannochloropsis gaditana]) HSP 1 Score: 73.9442 bits (180), Expect = 1.093e-11 Identity = 62/185 (33.51%), Postives = 82/185 (44.32%), Query Frame = 0 Query: 2 HNLGSKMTKLKHKALTVSQELSAAGLIPDVLPDDFRSAYSVNATFGCNNFDSGAKVPPGEMDHPHPVYKLIEARHGSYYTFILVDPDS-SPMQGSRSEVQLLHLVTNVSGQQPDSRNGNEVVPYKISRQDQGHIHGTHRYLLIALEQPQEGQQQLHIAPPKYRTQFSVLNFIHMNKVKPVGATLL 185 H G+ KH A L AG+IPDV+ D+F + T+ GA + P + H P L ++ G YT + DPD+ SP S E L +V+N+ G D G EVVPY Q GTHRY+L +EQP G + + PP R F F + VGAT Sbjct: 25 HRFGAVAQMTKHHA----ANLRDAGVIPDVI-DNFDPQVQIRITYDSLLITPGATILPRQGVH-MPQVTLEGSQPGHLYTLFMSDPDAPSPEHPSHREY-LHWIVSNIPGGANDIAEGTEVVPYAPPTPPQ----GTHRYVLTVMEQP--GTNPMTVRPPAQRGGFRTRTFGKEAGMDVVGATFF 196 HSP 2 Score: 62.3882 bits (150), Expect = 1.094e-7 Identity = 39/107 (36.45%), Postives = 51/107 (47.66%), Query Frame = 0 Query: 279 LYTVICADADFPSIHQPTDRSMLLMLATNIPGTSGDSRIGDPVVPYVSPLRLAGSTGIHRYFVLLLEQHGGALEEGAIDPPENRRAFSFHDFLKTHTSLEAVNATFF 385 LYT+ +D D PS P+ R L + +NIPG + D G VVPY P G HRY + ++EQ G + PP R F F K ++ V ATFF Sbjct: 96 LYTLFMSDPDAPSPEHPSHREYLHWIVSNIPGGANDIAEGTEVVPYAPP---TPPQGTHRYVLTVMEQPG--TNPMTVRPPAQRGGFRTRTFGK-EAGMDVVGATFF 196
BLAST of EWM29466.1 vs. NCBI_GenBank
Match: gi|336444830|gb|AEI55782.1| (flowering locus T [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 72.7886 bits (177), Expect = 1.304e-11 Identity = 60/174 (34.48%), Postives = 88/174 (50.57%), Query Frame = 0 Query: 226 LVLEGSVH-----FKVPVTLTI---NEEIVNAGDEVPAQVMDLAPVVQFHPGLEEVRKANALYTVICADADFPSIHQPTDRSMLLMLATNIPGTSGDSRIGDPVVPYVSPLRLAGSTGIHRYFVLLLEQHGGALEEGAIDPPENRRAFSFHDFLKTHTSLEAVNATFFLGRRKG 391 LVL G + F+ VTL I N + N GD P+QV++ P V+ G +++R YT++ D D PS P R LL L T+IPGT+ S G+ +V Y +P STGIHR+ L Q G ++ P+ R+ F+ DF + + V A +F +R+G Sbjct: 13 LVLGGVIGDVLEPFERSVTLKISFNNRNVKNGGDFRPSQVVN-QPRVEV--GGDDLRTC---YTLVMVDPDAPSPSNPHQREYLLWLVTDIPGTTSAS-FGEEIVYYENP---RPSTGIHRFVFALFRQLG----RQTVNAPQQRQNFNTRDFAELYNLGLPVAAVYFNCQREG 172
BLAST of EWM29466.1 vs. NCBI_GenBank
Match: gi|731357769|ref|XP_010690385.1| (PREDICTED: protein FLOWERING LOCUS T [Beta vulgaris subsp. vulgaris] >gi|306485920|gb|ADM92607.1| flowering locus T-like protein FT1 [Beta vulgaris] >gi|306485922|gb|ADM92608.1| flowering locus T-like protein FT1 [Beta vulgaris] >gi|870849153|gb|KMT01416.1| hypothetical protein BVRB_9g214250 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 69.707 bits (169), Expect = 1.569e-10 Identity = 59/174 (33.91%), Postives = 87/174 (50.00%), Query Frame = 0 Query: 226 LVLEGSVH-----FKVPVTLTI---NEEIVNAGDEVPAQVMDLAPVVQFHPGLEEVRKANALYTVICADADFPSIHQPTDRSMLLMLATNIPGTSGDSRIGDPVVPYVSPLRLAGSTGIHRYFVLLLEQHGGALEEGAIDPPENRRAFSFHDFLKTHTSLEAVNATFFLGRRKG 391 LVL G + F+ VTL I N + N GD P+QV++ P V+ G +++R YT++ D D PS P R L L T+IPGT+ S G+ +V Y +P STGIHR+ L Q G ++ P+ R+ F+ DF + + V A +F +R+G Sbjct: 13 LVLGGVIGDVLEPFERSVTLKISFNNRNVNNGGDFRPSQVVN-QPRVEV--GGDDLRTC---YTLVMVDPDAPSPSNPHQREYLHWLVTDIPGTTSAS-FGEEIVYYENP---RPSTGIHRFVFALFRQLG----RQTVNAPQQRQNFNTRDFAELYNLGLPVAAVYFNCQREG 172
BLAST of EWM29466.1 vs. NCBI_GenBank
Match: gi|294461154|gb|ADE76141.1| (unknown [Picea sitchensis]) HSP 1 Score: 70.0922 bits (170), Expect = 1.713e-10 Identity = 44/115 (38.26%), Postives = 56/115 (48.70%), Query Frame = 0 Query: 279 LYTVICADADFPSIHQPTDRSMLLMLATNIPG----TSGDSRIGDPVVPYVSPLRLAGSTGIHRYFVLLLEQHGGALEEGAIDPPENRRAFSFHDFLKTHTSLEAVNATFFLGRR 389 LYTV+ D D PS PT R+ L L NIPG TS G VV Y+ P G HRY LL +Q G E +DP E+R+ F DF+K H + ++F +R Sbjct: 74 LYTVMMVDPDAPSPTNPTFRNFLHWLVINIPGQTPPTSEIWETGKEVVSYMGP---DPPEGCHRYVFLLFKQKG----EIKVDPIEDRKLFKVEDFMKQHQLSPPMGGSYFYAKR 181
BLAST of EWM29466.1 vs. NCBI_GenBank
Match: gi|322794767|gb|EFZ17714.1| (hypothetical protein SINV_04146, partial [Solenopsis invicta]) HSP 1 Score: 70.8626 bits (172), Expect = 9.343e-10 Identity = 87/343 (25.36%), Postives = 147/343 (42.86%), Query Frame = 0 Query: 17 TVSQELSAAGLIPDVLPDDFRSAYSVNATFGCN-NFDSGAKVPPGEMDHPHPVYKLIEARHGSYYTFILVDPDSSPMQGSRSEVQLLHLVTNVSGQQPDSRNGNEVVPYKISRQDQGHIHGTHRYLLIALEQPQE---GQQQLHIAPPKYRTQFSVLNFI-HMNKVKPVGATLLHVSWDDYRP--SKSNSTNAQAREQDSLAYAESMVRKSKLLNELVLEGSVHFKVPVTLTINEEIVNAGDEV-PAQVMDLAPVVQFHPGLEEVRKANALYTVICADADFPSIHQPTDRSMLLMLATNIPGTSGDSRIGDPVVPYVSPLRLAGSTGIHRYFVLLLEQHGGAL 351 +++Q L G+IPDV+ D A +N T+ N + G + P ++ + P + A S+YT + DPD+ + + LV N+ G D G + Y S QG G HRY+ + +QP + +++L R +FS NF N P+ + +DDY P K SL ES +K+K+ +++ + + + + ++ V+ G E+ P + ++ + H G LYT++ D D P +R L NIP + G+ + YV P +TG HRY L+ +Q+ GA+ Sbjct: 30 SMAQALQTHGVIPDVV--DKVPASVLNVTYPNNLAVEIGKVLTPTQVKN-QPTVQW-NAETNSFYTLCMTDPDAPSRENPKFREWHHWLVGNIPGS--DVSKGEVLSQYIGSGPPQGT--GLHRYVFLLYKQPGKLTFDEKRLTNRSGDNRGKFSTKNFAAKYNLGDPIAGNMYQAEFDDYVPILYKQLEGILLCVISFSLGDVESEFKKAKIEPDIIEKAPIE---KIEVKYGKKTVDLGTELTPTETHEIPEIHYKHEG-------GVLYTLVLTDPDAPR-RGGYNREFRHWLVGNIP--EENVAKGEVLAEYVGPAP-PKNTGKHRYVFLIYKQNQGAI 350
BLAST of EWM29466.1 vs. NCBI_GenBank
Match: gi|961067368|ref|XP_014774397.1| (PREDICTED: phosphatidylethanolamine-binding protein homolog F40A3.3-like isoform X2 [Octopus bimaculoides] >gi|918340714|gb|KOG00992.1| hypothetical protein OCBIM_22018677mg [Octopus bimaculoides]) HSP 1 Score: 66.6254 bits (161), Expect = 1.078e-9 Identity = 48/134 (35.82%), Postives = 65/134 (48.51%), Query Frame = 0 Query: 258 MDLAPVVQFH-PGLEEVRKANALYTVICADADFPSIHQPTDRSMLLMLATNIPGTSGDSRIGDPVVPYVSPLRLAGSTGIHRYFVLLLEQHGGALE---EGAID--PPENRRAFSFHDFLKTHTSLEAVNATFF 385 M+L P + H P ++ AN+ YT+I DADFPS L NIPG D GD + YV PL G TG HRY +L +Q G +E E I+ + R+ ++ DF + H +E V FF Sbjct: 1 MNLTPSMTKHQPHIKFEADANSYYTLIMNDADFPSHSDQKMSEFQHWLIVNIPGN--DLSRGDVLTEYVGPLPNKG-TGHHRYVFMLFKQSKGKMEFRGERRINNRTSDGRKVYNMMDFARKHFLVEPVYGNFF 131 The following BLAST results are available for this feature:
BLAST of EWM29466.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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