EWM29466.1, cds1207 (CDS) Nannochloropsis gaditana

Overview
NameEWM29466.1
Unique Namecds1207
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002457.1:54961..56136 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM29466.1
ProductPhosphatidylethanolamine-binding protein PEBP
Orig transcript idgnl|cribi|Naga_100449g2.9454.mrna
GeneFT
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002457.1supercontigCM002457.1:54961..56136 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: INTERPRO
TermDefinition
IPR008914PtdEtn-bd_prot_PEBP
Homology
BLAST of EWM29466.1 vs. NCBI_GenBank
Match: gi|585112004|gb|EWM29466.1| (Phosphatidylethanolamine-binding protein PEBP [Nannochloropsis gaditana])

HSP 1 Score: 810.061 bits (2091), Expect = 0.000e+0
Identity = 391/391 (100.00%), Postives = 391/391 (100.00%), Query Frame = 0
Query:    1 MHNLGSKMTKLKHKALTVSQELSAAGLIPDVLPDDFRSAYSVNATFGCNNFDSGAKVPPGEMDHPHPVYKLIEARHGSYYTFILVDPDSSPMQGSRSEVQLLHLVTNVSGQQPDSRNGNEVVPYKISRQDQGHIHGTHRYLLIALEQPQEGQQQLHIAPPKYRTQFSVLNFIHMNKVKPVGATLLHVSWDDYRPSKSNSTNAQAREQDSLAYAESMVRKSKLLNELVLEGSVHFKVPVTLTINEEIVNAGDEVPAQVMDLAPVVQFHPGLEEVRKANALYTVICADADFPSIHQPTDRSMLLMLATNIPGTSGDSRIGDPVVPYVSPLRLAGSTGIHRYFVLLLEQHGGALEEGAIDPPENRRAFSFHDFLKTHTSLEAVNATFFLGRRKG 391
            MHNLGSKMTKLKHKALTVSQELSAAGLIPDVLPDDFRSAYSVNATFGCNNFDSGAKVPPGEMDHPHPVYKLIEARHGSYYTFILVDPDSSPMQGSRSEVQLLHLVTNVSGQQPDSRNGNEVVPYKISRQDQGHIHGTHRYLLIALEQPQEGQQQLHIAPPKYRTQFSVLNFIHMNKVKPVGATLLHVSWDDYRPSKSNSTNAQAREQDSLAYAESMVRKSKLLNELVLEGSVHFKVPVTLTINEEIVNAGDEVPAQVMDLAPVVQFHPGLEEVRKANALYTVICADADFPSIHQPTDRSMLLMLATNIPGTSGDSRIGDPVVPYVSPLRLAGSTGIHRYFVLLLEQHGGALEEGAIDPPENRRAFSFHDFLKTHTSLEAVNATFFLGRRKG
Sbjct:    1 MHNLGSKMTKLKHKALTVSQELSAAGLIPDVLPDDFRSAYSVNATFGCNNFDSGAKVPPGEMDHPHPVYKLIEARHGSYYTFILVDPDSSPMQGSRSEVQLLHLVTNVSGQQPDSRNGNEVVPYKISRQDQGHIHGTHRYLLIALEQPQEGQQQLHIAPPKYRTQFSVLNFIHMNKVKPVGATLLHVSWDDYRPSKSNSTNAQAREQDSLAYAESMVRKSKLLNELVLEGSVHFKVPVTLTINEEIVNAGDEVPAQVMDLAPVVQFHPGLEEVRKANALYTVICADADFPSIHQPTDRSMLLMLATNIPGTSGDSRIGDPVVPYVSPLRLAGSTGIHRYFVLLLEQHGGALEEGAIDPPENRRAFSFHDFLKTHTSLEAVNATFFLGRRKG 391          
BLAST of EWM29466.1 vs. NCBI_GenBank
Match: gi|969466328|ref|XP_001358906.3| (uncharacterized protein Dpse_GA14723 [Drosophila pseudoobscura pseudoobscura] >gi|950765779|gb|EAL28049.3| uncharacterized protein Dpse_GA14723 [Drosophila pseudoobscura pseudoobscura])

HSP 1 Score: 85.8853 bits (211), Expect = 9.165e-15
Identity = 98/340 (28.82%), Postives = 154/340 (45.29%), Query Frame = 0
Query:   27 LIPDVL---PDDFRSAYSVNATF-GCNNFDSGAKVPPGEM-DHPHPVYKLIEARHGSYYTFILVDPDSSPMQGSRSEVQLLHLVTNVSGQQ---PDSRNGNEVVPYKISRQDQGHIHGTHRYLLIALEQPQEGQQQLHIAPPKY----RTQFSVLNFIHMNKVK-PVGATLLHVSWDDYRPSKSNSTNAQAREQDSL-AYAESMVRKSKLLNELVLEG-SVHFKVPVTLTINE----EIVNAGDEVPAQVMDLAPV-VQFHPGLEEVRKANALYTVICADADFPSIHQPTDRSMLLMLATNIPGTSGDSRIGDPVVPYVSPLRLAGSTGIHRYFVLLLEQ 346
            +IPDV+   P +F     +N T+ G    D G ++ P ++ D P+  +    A   +YYT +++DPD+   Q   +  +L  +V N+ G Q    D R G  V P   S        G HRY+ +   Q Q+  +      PK+    R+ F  + F    K+  PV   +   SW    P+  NS +  A+++ +L    +++ ++SK+ +    E  + H  VP  + +      ++   G  V  +  +L P  V+  P +E   +  ALYT+I  D D PS  QP  R     L  NIPGT      GD +  YV      G TG+HRY  LL +Q
Sbjct:   35 VIPDVIEAGPQEF-----LNVTYLGFIQADRGVELQPMQVRDEPYVAW---NAPMTNYYTLLMIDPDAPSTQQPSAREKLHWMVLNIPGNQLIMGDVRAGY-VGPTPASGS------GLHRYVFLLYRQ-QDYTKFDFPRLPKHILTGRSNFRSMQFAKRYKLGYPVAGNVFTASWSTDVPALYNSISRGAKQKITLLETKQNISKRSKMSSSEAAECFAKHEIVPDVVPVGPNQLLKVTYGGGVVVDKGAELTPTQVKAQPNVEWDAEPEALYTLILTDPDAPSRKQPKFREWHHWLVVNIPGTQIAK--GDVLSEYVGAGPPEG-TGLHRYVFLLFKQ 355          
BLAST of EWM29466.1 vs. NCBI_GenBank
Match: gi|1037099374|ref|XP_017144696.1| (PREDICTED: uncharacterized protein LOC108157238 [Drosophila miranda] >gi|1037099385|ref|XP_017144697.1| PREDICTED: uncharacterized protein LOC108157238 [Drosophila miranda])

HSP 1 Score: 80.4925 bits (197), Expect = 5.846e-13
Identity = 95/340 (27.94%), Postives = 153/340 (45.00%), Query Frame = 0
Query:   27 LIPDVL---PDDFRSAYSVNATF-GCNNFDSGAKVPPGEM-DHPHPVYKLIEARHGSYYTFILVDPDSSPMQGSRSEVQLLHLVTNVSGQQ---PDSRNGNEVVPYKISRQDQGHIHGTHRYLLIALEQPQEGQQQLHIAPPKY----RTQFSVLNFIHMNKVK-PVGATLLHVSWDDYRPSKSNSTNAQAREQDSL-AYAESMVRKSKLLNELVLEG-SVHFKVPVTLTINE----EIVNAGDEVPAQVMDLAPV-VQFHPGLEEVRKANALYTVICADADFPSIHQPTDRSMLLMLATNIPGTSGDSRIGDPVVPYVSPLRLAGSTGIHRYFVLLLEQ 346
            +IPDV+   P +F     +N T+ G    D G ++ P ++ D P+  +    A   +YYT +++DPD+   Q   +  +L  +V N+ G Q    D R G  V P   S        G HR++ +   Q Q+  +      PK+    R+ F  + F    K+  PV   +   +W    P+  +S +  A+++  L    +++ ++SK+ +    E  + H  VP  + +      ++   G  V  +  +L P  V+  P +E   +  ALYT+I  D D PS  QP  R     L  NIPGT      GD +  YV      G TG+HRY  LL +Q
Sbjct:   35 VIPDVIEAGPQEF-----LNVTYLGFIQADRGVELQPMQVRDEPYVAW---NAPMTNYYTLLMIDPDAPSTQQPSAREKLHWMVLNIPGNQLIMGDVRAGY-VGPTPASGS------GLHRFIFLLYRQ-QDYTKFDFPRLPKHILTGRSNFRSMQFAKRYKLGYPVAGNVFTATWSTDVPALYDSISRGAKQKIPLLETKQNISKRSKMSSSEAAECFAKHEIVPDVIPVGPNKLLKVTYGGGLVVDKGGELTPTQVKAQPNVEWDAEPEALYTLILTDPDAPSRKQPKFREWHHWLVVNIPGTQIAK--GDVLSEYVGAGPPEG-TGLHRYVFLLFKQ 355          
BLAST of EWM29466.1 vs. NCBI_GenBank
Match: gi|1101392309|ref|XP_018909050.1| (PREDICTED: uncharacterized protein LOC109038462 [Bemisia tabaci] >gi|1101392311|ref|XP_018909051.1| PREDICTED: uncharacterized protein LOC109038462 [Bemisia tabaci])

HSP 1 Score: 79.337 bits (194), Expect = 1.625e-12
Identity = 93/373 (24.93%), Postives = 149/373 (39.95%), Query Frame = 0
Query:   17 TVSQELSAAGLIPDVLPDDFRSAYSVNATFGC-NNFDSGAKVPPGEMDHPHPVYKLIEARHGSYYTFILVDPDSSPMQGSRSEVQLLHLVTNVSGQQPDSRNGNEVVPYKISRQDQGHIHGTHRYLLIALEQP----QEGQQQLHIAPPKYRTQFSVLNFIHMNKV-KPVGATLLHVSW-DDYRPSKSNSTNAQAREQDSL--AYAESMVRKSKLLNELVLEGSVHFKVPVTLTINEEIVNAGDEV-PAQVMDLAPVVQFHPGLEEVRKANALYTVICADADFPSIHQPTDRSMLLMLATNIPGTSGDSRIGDPVVPYVSPLRLAGSTGIHRYFVLLLEQHGGALEEGAIDPPENRRAFSFHDFLKTHTSLEA 379
            T+ Q+++  G+IPDV+    R+  +V  +     NF +  K P    D     +    A    YYT IL DPDS      ++   LL LV N+ G   D ++G+ +V Y   R D G   G+HR++ +  +QP       + ++     + R  FS   F    ++  P  +   H  W D  + +  N    + R ++ +  A+ E  +    L      +  V FK         +  N G+ + P+Q        Q  P L+     +  Y VI  D D P       R  L  +  NIP  S D   GD +  Y+ P     +TG HRY   +  Q    ++              FH+ L+  + LE+
Sbjct:   37 TMQQQITKHGIIPDVITMQPRNHITVEYSKKVVANFGNKLKTP----DLKKKPWLQWSADPELYYTLILTDPDSPSRAEPKNREWLLWLVVNIPGF--DVKSGDTIVDY--MRPDAGKGTGSHRFIFLTYQQPSVIYNFNETKVSSREHEGRANFSTQKFCDKYRLGSPWASNFFHAEWFDKEKDAIENHPGIKKRRKEEMKEAFIEHGLIPHYLHGLPRRDLQVEFK-------GGKKANFGNVLKPSQ-------TQQTPYLQWSADPDHYYAVIMIDFDAPDAEHHAWREWLHWMVVNIP--SFDVEAGDILTQYLGP-NPGANTGFHRYIFTVFSQGNDTIK--------------FHEPLRVRSDLES 370          
BLAST of EWM29466.1 vs. NCBI_GenBank
Match: gi|585112503|gb|EWM29920.1| (tf1-like protein [Nannochloropsis gaditana])

HSP 1 Score: 73.9442 bits (180), Expect = 1.093e-11
Identity = 62/185 (33.51%), Postives = 82/185 (44.32%), Query Frame = 0
Query:    2 HNLGSKMTKLKHKALTVSQELSAAGLIPDVLPDDFRSAYSVNATFGCNNFDSGAKVPPGEMDHPHPVYKLIEARHGSYYTFILVDPDS-SPMQGSRSEVQLLHLVTNVSGQQPDSRNGNEVVPYKISRQDQGHIHGTHRYLLIALEQPQEGQQQLHIAPPKYRTQFSVLNFIHMNKVKPVGATLL 185
            H  G+     KH A      L  AG+IPDV+ D+F     +  T+       GA + P +  H  P   L  ++ G  YT  + DPD+ SP   S  E  L  +V+N+ G   D   G EVVPY      Q    GTHRY+L  +EQP  G   + + PP  R  F    F     +  VGAT  
Sbjct:   25 HRFGAVAQMTKHHA----ANLRDAGVIPDVI-DNFDPQVQIRITYDSLLITPGATILPRQGVH-MPQVTLEGSQPGHLYTLFMSDPDAPSPEHPSHREY-LHWIVSNIPGGANDIAEGTEVVPYAPPTPPQ----GTHRYVLTVMEQP--GTNPMTVRPPAQRGGFRTRTFGKEAGMDVVGATFF 196          

HSP 2 Score: 62.3882 bits (150), Expect = 1.094e-7
Identity = 39/107 (36.45%), Postives = 51/107 (47.66%), Query Frame = 0
Query:  279 LYTVICADADFPSIHQPTDRSMLLMLATNIPGTSGDSRIGDPVVPYVSPLRLAGSTGIHRYFVLLLEQHGGALEEGAIDPPENRRAFSFHDFLKTHTSLEAVNATFF 385
            LYT+  +D D PS   P+ R  L  + +NIPG + D   G  VVPY  P       G HRY + ++EQ G       + PP  R  F    F K    ++ V ATFF
Sbjct:   96 LYTLFMSDPDAPSPEHPSHREYLHWIVSNIPGGANDIAEGTEVVPYAPP---TPPQGTHRYVLTVMEQPG--TNPMTVRPPAQRGGFRTRTFGK-EAGMDVVGATFF 196          
BLAST of EWM29466.1 vs. NCBI_GenBank
Match: gi|336444830|gb|AEI55782.1| (flowering locus T [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 72.7886 bits (177), Expect = 1.304e-11
Identity = 60/174 (34.48%), Postives = 88/174 (50.57%), Query Frame = 0
Query:  226 LVLEGSVH-----FKVPVTLTI---NEEIVNAGDEVPAQVMDLAPVVQFHPGLEEVRKANALYTVICADADFPSIHQPTDRSMLLMLATNIPGTSGDSRIGDPVVPYVSPLRLAGSTGIHRYFVLLLEQHGGALEEGAIDPPENRRAFSFHDFLKTHTSLEAVNATFFLGRRKG 391
            LVL G +      F+  VTL I   N  + N GD  P+QV++  P V+   G +++R     YT++  D D PS   P  R  LL L T+IPGT+  S  G+ +V Y +P     STGIHR+   L  Q G       ++ P+ R+ F+  DF + +     V A +F  +R+G
Sbjct:   13 LVLGGVIGDVLEPFERSVTLKISFNNRNVKNGGDFRPSQVVN-QPRVEV--GGDDLRTC---YTLVMVDPDAPSPSNPHQREYLLWLVTDIPGTTSAS-FGEEIVYYENP---RPSTGIHRFVFALFRQLG----RQTVNAPQQRQNFNTRDFAELYNLGLPVAAVYFNCQREG 172          
BLAST of EWM29466.1 vs. NCBI_GenBank
Match: gi|731357769|ref|XP_010690385.1| (PREDICTED: protein FLOWERING LOCUS T [Beta vulgaris subsp. vulgaris] >gi|306485920|gb|ADM92607.1| flowering locus T-like protein FT1 [Beta vulgaris] >gi|306485922|gb|ADM92608.1| flowering locus T-like protein FT1 [Beta vulgaris] >gi|870849153|gb|KMT01416.1| hypothetical protein BVRB_9g214250 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 69.707 bits (169), Expect = 1.569e-10
Identity = 59/174 (33.91%), Postives = 87/174 (50.00%), Query Frame = 0
Query:  226 LVLEGSVH-----FKVPVTLTI---NEEIVNAGDEVPAQVMDLAPVVQFHPGLEEVRKANALYTVICADADFPSIHQPTDRSMLLMLATNIPGTSGDSRIGDPVVPYVSPLRLAGSTGIHRYFVLLLEQHGGALEEGAIDPPENRRAFSFHDFLKTHTSLEAVNATFFLGRRKG 391
            LVL G +      F+  VTL I   N  + N GD  P+QV++  P V+   G +++R     YT++  D D PS   P  R  L  L T+IPGT+  S  G+ +V Y +P     STGIHR+   L  Q G       ++ P+ R+ F+  DF + +     V A +F  +R+G
Sbjct:   13 LVLGGVIGDVLEPFERSVTLKISFNNRNVNNGGDFRPSQVVN-QPRVEV--GGDDLRTC---YTLVMVDPDAPSPSNPHQREYLHWLVTDIPGTTSAS-FGEEIVYYENP---RPSTGIHRFVFALFRQLG----RQTVNAPQQRQNFNTRDFAELYNLGLPVAAVYFNCQREG 172          
BLAST of EWM29466.1 vs. NCBI_GenBank
Match: gi|294461154|gb|ADE76141.1| (unknown [Picea sitchensis])

HSP 1 Score: 70.0922 bits (170), Expect = 1.713e-10
Identity = 44/115 (38.26%), Postives = 56/115 (48.70%), Query Frame = 0
Query:  279 LYTVICADADFPSIHQPTDRSMLLMLATNIPG----TSGDSRIGDPVVPYVSPLRLAGSTGIHRYFVLLLEQHGGALEEGAIDPPENRRAFSFHDFLKTHTSLEAVNATFFLGRR 389
            LYTV+  D D PS   PT R+ L  L  NIPG    TS     G  VV Y+ P       G HRY  LL +Q G    E  +DP E+R+ F   DF+K H     +  ++F  +R
Sbjct:   74 LYTVMMVDPDAPSPTNPTFRNFLHWLVINIPGQTPPTSEIWETGKEVVSYMGP---DPPEGCHRYVFLLFKQKG----EIKVDPIEDRKLFKVEDFMKQHQLSPPMGGSYFYAKR 181          
BLAST of EWM29466.1 vs. NCBI_GenBank
Match: gi|322794767|gb|EFZ17714.1| (hypothetical protein SINV_04146, partial [Solenopsis invicta])

HSP 1 Score: 70.8626 bits (172), Expect = 9.343e-10
Identity = 87/343 (25.36%), Postives = 147/343 (42.86%), Query Frame = 0
Query:   17 TVSQELSAAGLIPDVLPDDFRSAYSVNATFGCN-NFDSGAKVPPGEMDHPHPVYKLIEARHGSYYTFILVDPDSSPMQGSRSEVQLLHLVTNVSGQQPDSRNGNEVVPYKISRQDQGHIHGTHRYLLIALEQPQE---GQQQLHIAPPKYRTQFSVLNFI-HMNKVKPVGATLLHVSWDDYRP--SKSNSTNAQAREQDSLAYAESMVRKSKLLNELVLEGSVHFKVPVTLTINEEIVNAGDEV-PAQVMDLAPVVQFHPGLEEVRKANALYTVICADADFPSIHQPTDRSMLLMLATNIPGTSGDSRIGDPVVPYVSPLRLAGSTGIHRYFVLLLEQHGGAL 351
            +++Q L   G+IPDV+  D   A  +N T+  N   + G  + P ++ +  P  +   A   S+YT  + DPD+   +  +       LV N+ G   D   G  +  Y  S   QG   G HRY+ +  +QP +    +++L       R +FS  NF    N   P+   +    +DDY P   K            SL   ES  +K+K+  +++ +  +     + +   ++ V+ G E+ P +  ++  +   H G         LYT++  D D P      +R     L  NIP    +   G+ +  YV P     +TG HRY  L+ +Q+ GA+
Sbjct:   30 SMAQALQTHGVIPDVV--DKVPASVLNVTYPNNLAVEIGKVLTPTQVKN-QPTVQW-NAETNSFYTLCMTDPDAPSRENPKFREWHHWLVGNIPGS--DVSKGEVLSQYIGSGPPQGT--GLHRYVFLLYKQPGKLTFDEKRLTNRSGDNRGKFSTKNFAAKYNLGDPIAGNMYQAEFDDYVPILYKQLEGILLCVISFSLGDVESEFKKAKIEPDIIEKAPIE---KIEVKYGKKTVDLGTELTPTETHEIPEIHYKHEG-------GVLYTLVLTDPDAPR-RGGYNREFRHWLVGNIP--EENVAKGEVLAEYVGPAP-PKNTGKHRYVFLIYKQNQGAI 350          
BLAST of EWM29466.1 vs. NCBI_GenBank
Match: gi|961067368|ref|XP_014774397.1| (PREDICTED: phosphatidylethanolamine-binding protein homolog F40A3.3-like isoform X2 [Octopus bimaculoides] >gi|918340714|gb|KOG00992.1| hypothetical protein OCBIM_22018677mg [Octopus bimaculoides])

HSP 1 Score: 66.6254 bits (161), Expect = 1.078e-9
Identity = 48/134 (35.82%), Postives = 65/134 (48.51%), Query Frame = 0
Query:  258 MDLAPVVQFH-PGLEEVRKANALYTVICADADFPSIHQPTDRSMLLMLATNIPGTSGDSRIGDPVVPYVSPLRLAGSTGIHRYFVLLLEQHGGALE---EGAID--PPENRRAFSFHDFLKTHTSLEAVNATFF 385
            M+L P +  H P ++    AN+ YT+I  DADFPS            L  NIPG   D   GD +  YV PL   G TG HRY  +L +Q  G +E   E  I+    + R+ ++  DF + H  +E V   FF
Sbjct:    1 MNLTPSMTKHQPHIKFEADANSYYTLIMNDADFPSHSDQKMSEFQHWLIVNIPGN--DLSRGDVLTEYVGPLPNKG-TGHHRYVFMLFKQSKGKMEFRGERRINNRTSDGRKVYNMMDFARKHFLVEPVYGNFF 131          
The following BLAST results are available for this feature:
BLAST of EWM29466.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585112004|gb|EWM29466.1|0.000e+0100.00Phosphatidylethanolamine-binding protein PEBP [Nan... [more]
gi|969466328|ref|XP_001358906.3|9.165e-1528.82uncharacterized protein Dpse_GA14723 [Drosophila p... [more]
gi|1037099374|ref|XP_017144696.1|5.846e-1327.94PREDICTED: uncharacterized protein LOC108157238 [D... [more]
gi|1101392309|ref|XP_018909050.1|1.625e-1224.93PREDICTED: uncharacterized protein LOC109038462 [B... [more]
gi|585112503|gb|EWM29920.1|1.093e-1133.51tf1-like protein [Nannochloropsis gaditana][more]
gi|336444830|gb|AEI55782.1|1.304e-1134.48flowering locus T [Beta vulgaris subsp. vulgaris][more]
gi|731357769|ref|XP_010690385.1|1.569e-1033.91PREDICTED: protein FLOWERING LOCUS T [Beta vulgari... [more]
gi|294461154|gb|ADE76141.1|1.713e-1038.26unknown [Picea sitchensis][more]
gi|322794767|gb|EFZ17714.1|9.343e-1025.36hypothetical protein SINV_04146, partial [Solenops... [more]
gi|961067368|ref|XP_014774397.1|1.078e-935.82PREDICTED: phosphatidylethanolamine-binding protei... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna1208rna1208Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications