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Properties
| Property Name | Value |
|---|
| Product | Phosphatidylethanolamine-binding protein PEBP |
| Orig transcript id | gnl|cribi|Naga_100449g2.9454.mrna |
| Orig protein id | gnl|cribi|Naga_100449g2.9454 |
| Gene | FT |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002457.1 | supercontig | CM002457.1:54621..56636 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna1208 ID=rna1208|Name=rna1208|organism=Nannochloropsis gaditana|type=mRNA|length=1356bp
ATGGCAGCGGATACAGCACAGTTACATGATCGTATTGCGACGCTCGAGAA
GGAAAAAATCGAGTGTTTGGAGCTGATAAAGACATTGCACCGAAAAATCC
ACGCTTTGGAGGAGGAGAACGACCTCCTGGCAGTGGAGAATGAAAGACTC
AGAGCACAAGAACCTCTTTCGGTCGTGGATGGACAATCAAATGTCGCGCC
AGAAACAGGAATCGGTATCTTTGATTTGCCGATCAATACCACTTATTTGG
AAGAATGCGATGGAGCAAAGTATATTACGCAAGAGTTGGCAGAGGTAGAA
GGTGTTGGAGGCGGACTCAACCCTCTTTGCGTCCGCATCTGCACATTTCC
CTCCCTCCCTGCCTCTGCCGCTCCTTTCATTCCTGACACGGTCCTGGTGG
CAGTGGGTGGCGTTGACAAGTTCCTGACTCTCTACAGGGTCGAGACAAAT
GGCAGTCCCTCCGAGAAGGTCTTGGTCCTCTCAGGCTTCGGCGGGCCCCT
GCTGAGCCTCGACTTTTTCGCCGCAGGGGAGGAGGAGGGGAGGCTTCTTG
TCACGTGCATGGACGGCAGTCACAGCGTGGTTCATTTCAATAAACATCGT
CCCGTGGATGCCTGTGTCGTGCACGCGCGCAAGGATCACGAGAAACACGC
AGTCATAGGCCGCTGGTCTCGATGCGGCCGTCTGTATGCGACAGGCGGGC
ACGATAAGGCTGTGCACCTGTATGACAGCAACGGAGGGGGGGCACTCAAG
TCCTTCTACTTCCTGGGCAACGTCGAAGCGCTCGCCTTTGTGGACCGCCC
CGCCAGCGGCTGTGGGAAAGTTCTCAAACCTCTTGAAACAGGGGAGGCGC
AGACGAGAGGGGAAGGCGGGTTGATCGCTTGCTCGCGGCCCTTCCTGATC
GTGGCCTCCCGCAACGTGGCGCATTTGACCTACATCGATTGCGACTCCTT
CGAGAAGCACACGGTCTCTCTCAACAACGCCTTGTGGGACACGCATGTCT
CCTTCTCCGTCCTCTCTCTGGCCGTTTCCCCCTGCCAGGAATTCCTGCTG
GCCGCCACAGACAAATCGCGCGTTATACTTTACCGCATAGGGCATAATGA
GCAGCTACGTTCCTTGTACGGACACAGGGCCGATGAATACAGTAATCCCC
GCGTCGCCTGGGATCGGAACGGTAATTACGTCTACTGCTCGTCACAAGAA
GGGAATGAGCTGGTAGGGTGGTCGCTAGCTTCTGAGCGGGTCGTTGTGAA
ACTGAAGGGCCACCGTGCTTTGGTGCGTGACATGACGTTTGACCCGGCCT
CATGCCTGCTAGCCTCTATTGCTTACGACAAGACTTTGCGGCTTTGGAGC
AGTTAG back to topprotein sequence of rna1208 >rna1208-protein ID=rna1208-protein|Name=rna1208|organism=Nannochloropsis gaditana|type=polypeptide|length=391bp
MHNLGSKMTKLKHKALTVSQELSAAGLIPDVLPDDFRSAYSVNATFGCNN
FDSGAKVPPGEMDHPHPVYKLIEARHGSYYTFILVDPDSSPMQGSRSEVQ
LLHLVTNVSGQQPDSRNGNEVVPYKISRQDQGHIHGTHRYLLIALEQPQE
GQQQLHIAPPKYRTQFSVLNFIHMNKVKPVGATLLHVSWDDYRPSKSNST
NAQAREQDSLAYAESMVRKSKLLNELVLEGSVHFKVPVTLTINEEIVNAG
DEVPAQVMDLAPVVQFHPGLEEVRKANALYTVICADADFPSIHQPTDRSM
LLMLATNIPGTSGDSRIGDPVVPYVSPLRLAGSTGIHRYFVLLLEQHGGA
LEEGAIDPPENRRAFSFHDFLKTHTSLEAVNATFFLGRRKG back to topmRNA from alignment at CM002457.1:54621..56636+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna1208 ID=rna1208|Name=rna1208|organism=Nannochloropsis gaditana|type=mRNA|length=2016bp|location=Sequence derived from alignment at CM002457.1:54621..56636+ (Nannochloropsis gaditana)
ACTGGGGAAGTAGAATAGGATGACCGTGACAGTTGAAGTTTGGCTGTGAT
GCCGCGACAGTCGAAAGTTCCACTTGGTCATGCGAGTTtatgttttccct
cccttccctcttttcctggTATTTGCATTCTGCTTTCCAATTCTGAATAT
ACATCGACTGTTTCAATAAGCATTACAACCAGGTTTGTATTTTGACTTTT
TGTCGACCTCGTTCTGTGGTTCATTCCTTGTAAAGGCATTAATTGTGCGT
GCTGTCTATGGAGCAACGTACTATATGTACCAGGATCCTAGAATAGACAA
GACATCAATAGCTTGGCTATGACCAAAACATACATCATTAATGCATAATC
TAGGATCGAAAATGACCAAATTAAAGCATAAGGCCTTGACTGTCTCCCAG
GAGCTGTCTGCCGCGGGCCTGATACCTGATGTACTCCCCGACGATTTTCG
AAGCGCATATTCTGTCAACGCCACATTTGGGTGCAATAATTTCGACTCTG
GGGCAAAAGTTCCTCCAGGAGAAATGGATCATCCTCATCCGGTGTATAAG
TTGATCGAAGCTCGACATGGGAGCTATTACACTTTCATCTTGGTGGATCC
TGATTCATCTCCCATGCAGGGCTCTCGCAGCGAGGTACAACTTTTACACC
TCGTGACAAATGTGTCGGGACAACAACCAGACAGTCGTAATGGGAACGAA
GTAGTCCCCTATAAAATTTCGAGACAAGACCAAGGCCACATTCATGGTAC
TCATCGCTATTTGCTGATTGCTTTGGAACAGCCTCAGGAAGGACAACAAC
AATTGCACATCGCTCCGCCGAAGTACCGCACGCAGTTTTCCGTCTTGAAT
TTCATTCATATGAACAAGGTGAAACCTGTGGGAGCTACATTGCTTCACGT
GTCATGGGATGATTATCGGCCAAGTAAATCCAATAGCACGAATGCCCAGG
CACGAGAGCAAGACAGCTTAGCCTACGCTGAGTCCATGGTCAGAAAGTCC
AAGTTGCTCAACGAGCTAGTCCTGGAAGGGAGTGTACATTTCAAGGTACC
TGTAACTCTGACAATCAATGAAGAGATTGTCAACGCTGGGGATGAGGTGC
CTGCCCAGGTCATGGATTTGGCTCCTGTGGTTCAGTTTCACCCAGGACTC
GAAGAAGTTCGAAAAGCTAATGCTTTGTATACAGTGATATGTGCGGATGC
CGACTTCCCTTCCATACATCAGCCGACCGATCGGTCCATGCTTTTGATGC
TTGCGACAAACATTCCTGGCACGTCGGGGGACAGTCGTATTGGCGACCCC
GTGGTGCCTTACGTGTCTCCCTTGAGACTTGCAGGTAGTACGGGAATCCA
TCGCTATTTTGTTCTGCTTTTGGAGCAACATGGCGGtgctctggaggagg
gtgctATTGATCCGCCTGAAAATAGGCGagccttttctttccatgaTTTT
TTGAAAACGCACACCAGTCTGGAGGCAGTGAATGCAACTTTCTTTTTAGG
GCGCCGCAAAGGATGATGCATGAAAATCGTAAACTATGAGATATAGGAAT
AGATCAGGTGTTTGCATGATACGTCTCGTGGAGCAGAGGAGACGCTCTCA
CAGAGACTTTGTGGCTATTATGAGCATATTGTAAGGAAGTAGGTACGTTA
AAAATACAAGACTTGAGATGTTGAACAAGTCATATTGGTACAACAGATAT
ATTTCGTTGAGTGATGGGCAAGATTTCTGGCAAGGGGTAGATGATTAAGA
GCTCTTGAAAGGATACGCACACAAAAGACAATTGCATGTCGCCACCGCTC
ATGAAGTATGCATGCTTAAGCGTATTTTCTTGTGAACTTTACGTCAGGGT
GCTGCTCTAAACGATTGGGTTGCGCGAAAACCTAAAATCCTACCAGCGCA
CCATTCTTACGAAAAGCTTGCTGCATGGGCTTGGAACTGTCGACTTTTCA
TGGATCCGTTAATGGCCGCAGTCGTCTGAATATTAGTCAGCTCACTCTAT
GAGCGCGCACGTTTCC back to topCoding sequence (CDS) from alignment at CM002457.1:54621..56636+ >rna1208 ID=rna1208|Name=rna1208|organism=Nannochloropsis gaditana|type=CDS|length=1176bp|location=Sequence derived from alignment at CM002457.1:54621..56636+ (Nannochloropsis gaditana)
ATGCATAATCTAGGATCGAAAATGACCAAATTAAAGCATAAGGCCTTGAC
TGTCTCCCAGGAGCTGTCTGCCGCGGGCCTGATACCTGATGTACTCCCCG
ACGATTTTCGAAGCGCATATTCTGTCAACGCCACATTTGGGTGCAATAAT
TTCGACTCTGGGGCAAAAGTTCCTCCAGGAGAAATGGATCATCCTCATCC
GGTGTATAAGTTGATCGAAGCTCGACATGGGAGCTATTACACTTTCATCT
TGGTGGATCCTGATTCATCTCCCATGCAGGGCTCTCGCAGCGAGGTACAA
CTTTTACACCTCGTGACAAATGTGTCGGGACAACAACCAGACAGTCGTAA
TGGGAACGAAGTAGTCCCCTATAAAATTTCGAGACAAGACCAAGGCCACA
TTCATGGTACTCATCGCTATTTGCTGATTGCTTTGGAACAGCCTCAGGAA
GGACAACAACAATTGCACATCGCTCCGCCGAAGTACCGCACGCAGTTTTC
CGTCTTGAATTTCATTCATATGAACAAGGTGAAACCTGTGGGAGCTACAT
TGCTTCACGTGTCATGGGATGATTATCGGCCAAGTAAATCCAATAGCACG
AATGCCCAGGCACGAGAGCAAGACAGCTTAGCCTACGCTGAGTCCATGGT
CAGAAAGTCCAAGTTGCTCAACGAGCTAGTCCTGGAAGGGAGTGTACATT
TCAAGGTACCTGTAACTCTGACAATCAATGAAGAGATTGTCAACGCTGGG
GATGAGGTGCCTGCCCAGGTCATGGATTTGGCTCCTGTGGTTCAGTTTCA
CCCAGGACTCGAAGAAGTTCGAAAAGCTAATGCTTTGTATACAGTGATAT
GTGCGGATGCCGACTTCCCTTCCATACATCAGCCGACCGATCGGTCCATG
CTTTTGATGCTTGCGACAAACATTCCTGGCACGTCGGGGGACAGTCGTAT
TGGCGACCCCGTGGTGCCTTACGTGTCTCCCTTGAGACTTGCAGGTAGTA
CGGGAATCCATCGCTATTTTGTTCTGCTTTTGGAGCAACATGGCGGtgct
ctggaggagggtgctATTGATCCGCCTGAAAATAGGCGagccttttcttt
ccatgaTTTTTTGAAAACGCACACCAGTCTGGAGGCAGTGAATGCAACTT
TCTTTTTAGGGCGCCGCAAAGGATGA back to top
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