EWM29478.1, cds1197 (CDS) Nannochloropsis gaditana

Overview
NameEWM29478.1
Unique Namecds1197
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002457.1:25186..25477 +
Alignment locationCM002457.1:25603..25727 +
Alignment locationCM002457.1:25878..26000 +
Alignment locationCM002457.1:26085..26142 +
Alignment locationCM002457.1:26234..26320 +
Alignment locationCM002457.1:26431..26676 +
Alignment locationCM002457.1:26826..26945 +
Alignment locationCM002457.1:27025..27059 +
Alignment locationCM002457.1:27223..27435 +

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Properties
Property NameValue
Protein idEWM29478.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100128g8.9400.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002457.1supercontigCM002457.1:25186..25477 +
CM002457.1supercontigCM002457.1:25603..25727 +
CM002457.1supercontigCM002457.1:25878..26000 +
CM002457.1supercontigCM002457.1:26085..26142 +
CM002457.1supercontigCM002457.1:26234..26320 +
CM002457.1supercontigCM002457.1:26431..26676 +
CM002457.1supercontigCM002457.1:26826..26945 +
CM002457.1supercontigCM002457.1:27025..27059 +
CM002457.1supercontigCM002457.1:27223..27435 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
[Close]
BLAST of EWM29478.1 vs. NCBI_GenBank
Match: gi|585112019|gb|EWM29478.1| (hypothetical protein Naga_100128g8 [Nannochloropsis gaditana])

HSP 1 Score: 897.116 bits (2317), Expect = 0.000e+0
Identity = 432/432 (100.00%), Postives = 432/432 (100.00%), Query Frame = 0 
Query:    1 MMVVHHLLVVFFLITLNTSTTAQRLQHSLRAITPVQGYSSNTAVHFNRTASGNSYNTLATTLVVDGNIFPELLYKQQRVEYTFAIPVSLAPVELLTDGWVKDFAAFPCLQCYVTDAGFYAEYAEEANTQLAFLSGDQFKALLVHCASAPGKVTQACWDAAGLGDVEIEAYPYQTYAYHDKGTTPVFEGTYLVFNNGDNPVNIEYGMAYFGLNPGAPSEPGGLVVKEGEGLTPTRLKEIVQGLQRPILIPKATDSLDIPGQRKKEIRPVEERASSVERTSKSLRVAGSKAERVEGTWTRYALAMGNEVANNGYNWWSNAGATYEGGNLVASFLSGDLYIKLRTACPQTTEEGLLIVTSDCWKQISNRSTIPKTLASGERIERDYDGRADPNGGGSCVDGWWIFMNESKSTGANVVKADANFGLRTLGNNPRDA 432
            MMVVHHLLVVFFLITLNTSTTAQRLQHSLRAITPVQGYSSNTAVHFNRTASGNSYNTLATTLVVDGNIFPELLYKQQRVEYTFAIPVSLAPVELLTDGWVKDFAAFPCLQCYVTDAGFYAEYAEEANTQLAFLSGDQFKALLVHCASAPGKVTQACWDAAGLGDVEIEAYPYQTYAYHDKGTTPVFEGTYLVFNNGDNPVNIEYGMAYFGLNPGAPSEPGGLVVKEGEGLTPTRLKEIVQGLQRPILIPKATDSLDIPGQRKKEIRPVEERASSVERTSKSLRVAGSKAERVEGTWTRYALAMGNEVANNGYNWWSNAGATYEGGNLVASFLSGDLYIKLRTACPQTTEEGLLIVTSDCWKQISNRSTIPKTLASGERIERDYDGRADPNGGGSCVDGWWIFMNESKSTGANVVKADANFGLRTLGNNPRDA
Sbjct:    1 MMVVHHLLVVFFLITLNTSTTAQRLQHSLRAITPVQGYSSNTAVHFNRTASGNSYNTLATTLVVDGNIFPELLYKQQRVEYTFAIPVSLAPVELLTDGWVKDFAAFPCLQCYVTDAGFYAEYAEEANTQLAFLSGDQFKALLVHCASAPGKVTQACWDAAGLGDVEIEAYPYQTYAYHDKGTTPVFEGTYLVFNNGDNPVNIEYGMAYFGLNPGAPSEPGGLVVKEGEGLTPTRLKEIVQGLQRPILIPKATDSLDIPGQRKKEIRPVEERASSVERTSKSLRVAGSKAERVEGTWTRYALAMGNEVANNGYNWWSNAGATYEGGNLVASFLSGDLYIKLRTACPQTTEEGLLIVTSDCWKQISNRSTIPKTLASGERIERDYDGRADPNGGGSCVDGWWIFMNESKSTGANVVKADANFGLRTLGNNPRDA 432
[Close]
BLAST of EWM29478.1 vs. NCBI_GenBank
Match: gi|553191274|ref|XP_005855353.1| (hypothetical protein NGA_0119500, partial [Nannochloropsis gaditana CCMP526] >gi|422293710|gb|EKU21010.1| hypothetical protein NGA_0119500, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 461.84 bits (1187), Expect = 9.545e-161
Identity = 222/223 (99.55%), Postives = 222/223 (99.55%), Query Frame = 0 
Query:  140 ALLVHCASAPGKVTQACWDAAGLGDVEIEAYPYQTYAYHDKGTTPVFEGTYLVFNNGDNPVNIEYGMAYFGLNPGAPSEPGGLVVKEGEGLTPTRLKEIVQGLQRPILIPKATDSLDIPGQRKKEIRPVEERASSVERTSKSLRVAGSKAERVEGTWTRYALAMGNEVANNGYNWWSNAGATYEGGNLVASFLSGDLYIKLRTACPQTTEEGLLIVTSDCWKQ 362
            ALLVHCASAPGKVTQACWDAAGLGDVEIEAYPYQTYAYHDKGTTPVFEGTYLVFNNGDNPVNIEYGMAYFGLNPGAPSEPGGLVVKEGEGLTPTRLKEIVQGLQRPILIPKATDSLDIPGQRKKEIRPVEERASSVERTSKSLRVAGSKAERVEGTWTRYALAMGNEVANNGYNWWSNAGATYEGGNLVASFLSGDLYIKLRTACPQTTEEGLL VTSDCWKQ
Sbjct:    2 ALLVHCASAPGKVTQACWDAAGLGDVEIEAYPYQTYAYHDKGTTPVFEGTYLVFNNGDNPVNIEYGMAYFGLNPGAPSEPGGLVVKEGEGLTPTRLKEIVQGLQRPILIPKATDSLDIPGQRKKEIRPVEERASSVERTSKSLRVAGSKAERVEGTWTRYALAMGNEVANNGYNWWSNAGATYEGGNLVASFLSGDLYIKLRTACPQTTEEGLLFVTSDCWKQ 224
The following BLAST results are available for this feature:
BLAST of EWM29478.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 2
Match NameE-valueIdentityDescription
gi|585112019|gb|EWM29478.1|0.000e+0100.00hypothetical protein Naga_100128g8 [Nannochloropsi... [more]
gi|553191274|ref|XP_005855353.1|9.545e-16199.55hypothetical protein NGA_0119500, partial [Nannoch... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna1198rna1198Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications