EWM29571.1, cds1156 (CDS) Nannochloropsis gaditana

Overview
NameEWM29571.1
Unique Namecds1156
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002456.1:1346527..1346865 +
Alignment locationCM002456.1:1347070..1347321 +
Alignment locationCM002456.1:1347630..1347751 +
Alignment locationCM002456.1:1347928..1348045 +
Alignment locationCM002456.1:1348224..1348356 +
Alignment locationCM002456.1:1348533..1348661 +
Alignment locationCM002456.1:1349599..1349678 +
Alignment locationCM002456.1:1349843..1350346 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM29571.1
Productuncharacterized protein
Orig transcript idgnl|cribi|Naga_100006g11.8660.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002456.1supercontigCM002456.1:1346527..1346865 +
CM002456.1supercontigCM002456.1:1347070..1347321 +
CM002456.1supercontigCM002456.1:1347630..1347751 +
CM002456.1supercontigCM002456.1:1347928..1348045 +
CM002456.1supercontigCM002456.1:1348224..1348356 +
CM002456.1supercontigCM002456.1:1348533..1348661 +
CM002456.1supercontigCM002456.1:1349599..1349678 +
CM002456.1supercontigCM002456.1:1349843..1350346 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
GO:0016301kinase activity
GO:0005515protein binding
GO:0004683calmodulin-dependent protein kinase activity
GO:0005516calmodulin binding
Vocabulary: Biological Process
TermDefinition
GO:0006950response to stress
GO:0042221response to chemical
GO:0006464cellular protein modification process
GO:0009056catabolic process
GO:0006468protein phosphorylation
Vocabulary: INTERPRO
TermDefinition
IPR003323OTU_dom
IPR013543Ca/CaM-dep_prot_kinase-assoc
Homology
BLAST of EWM29571.1 vs. NCBI_GenBank
Match: gi|585112142|gb|EWM29571.1| (uncharacterized protein Naga_100006g11 [Nannochloropsis gaditana])

HSP 1 Score: 1157.13 bits (2992), Expect = 0.000e+0
Identity = 558/558 (100.00%), Postives = 558/558 (100.00%), Query Frame = 0
Query:    1 MKDTPCLSSLPATQYCSSFPWPLSMISVSTRRARPSRRGARLRRSPTLMPTFLLLLLVAPSATFRFSFAATNFPSGTATGDGRLEVYNSISRGGFFSETWDVHHSKSKMRVRQVPGDGSCLFHAIYVALAYATNGSHPQEDYEAMCKAAGVLRQTALDYLSDDPSRLLTVTYNQDMKSQELLDMTSKEMGLSAEQYLVRLRDPKEWGGGLEIVALANALERPIFLYELKPVGLLFWSRFVFKKMVECGMPKFSPKKSLHILIADCNFPDCAPYFYNKAGNHFLALFPCEDASTVPTSDNSVPAPSAAPVASSLENSGSHAFAKCRERQRRVHGLNGLGPGWLVYESIGKIGLLKKVKNTLYNMSHILTFKMLLAKSLATQSLRLQASITAKKAFPVHLLSTVRETIPSRPSHKQVVAEVAATTEKWLETVTGQKPTSPAETAALYAKDGVLWATVSTELRVNPKEIRDYFDVFARLPNLKVSDYKPYIRVYGDIALNDGYYTVTFDSPEGKKVTKARYVFVYKRDEASGAWEIIDHHSSAMPVAPAGLKKATTVAPPS 558
            MKDTPCLSSLPATQYCSSFPWPLSMISVSTRRARPSRRGARLRRSPTLMPTFLLLLLVAPSATFRFSFAATNFPSGTATGDGRLEVYNSISRGGFFSETWDVHHSKSKMRVRQVPGDGSCLFHAIYVALAYATNGSHPQEDYEAMCKAAGVLRQTALDYLSDDPSRLLTVTYNQDMKSQELLDMTSKEMGLSAEQYLVRLRDPKEWGGGLEIVALANALERPIFLYELKPVGLLFWSRFVFKKMVECGMPKFSPKKSLHILIADCNFPDCAPYFYNKAGNHFLALFPCEDASTVPTSDNSVPAPSAAPVASSLENSGSHAFAKCRERQRRVHGLNGLGPGWLVYESIGKIGLLKKVKNTLYNMSHILTFKMLLAKSLATQSLRLQASITAKKAFPVHLLSTVRETIPSRPSHKQVVAEVAATTEKWLETVTGQKPTSPAETAALYAKDGVLWATVSTELRVNPKEIRDYFDVFARLPNLKVSDYKPYIRVYGDIALNDGYYTVTFDSPEGKKVTKARYVFVYKRDEASGAWEIIDHHSSAMPVAPAGLKKATTVAPPS
Sbjct:    1 MKDTPCLSSLPATQYCSSFPWPLSMISVSTRRARPSRRGARLRRSPTLMPTFLLLLLVAPSATFRFSFAATNFPSGTATGDGRLEVYNSISRGGFFSETWDVHHSKSKMRVRQVPGDGSCLFHAIYVALAYATNGSHPQEDYEAMCKAAGVLRQTALDYLSDDPSRLLTVTYNQDMKSQELLDMTSKEMGLSAEQYLVRLRDPKEWGGGLEIVALANALERPIFLYELKPVGLLFWSRFVFKKMVECGMPKFSPKKSLHILIADCNFPDCAPYFYNKAGNHFLALFPCEDASTVPTSDNSVPAPSAAPVASSLENSGSHAFAKCRERQRRVHGLNGLGPGWLVYESIGKIGLLKKVKNTLYNMSHILTFKMLLAKSLATQSLRLQASITAKKAFPVHLLSTVRETIPSRPSHKQVVAEVAATTEKWLETVTGQKPTSPAETAALYAKDGVLWATVSTELRVNPKEIRDYFDVFARLPNLKVSDYKPYIRVYGDIALNDGYYTVTFDSPEGKKVTKARYVFVYKRDEASGAWEIIDHHSSAMPVAPAGLKKATTVAPPS 558          
BLAST of EWM29571.1 vs. NCBI_GenBank
Match: gi|553188044|ref|XP_005854725.1| (hypothetical protein NGA_0375300 [Nannochloropsis gaditana CCMP526] >gi|422294338|gb|EKU21638.1| hypothetical protein NGA_0375300 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 496.123 bits (1276), Expect = 2.182e-172
Identity = 238/239 (99.58%), Postives = 238/239 (99.58%), Query Frame = 0
Query:    1 MKDTPCLSSLPATQYCSSFPWPLSMISVSTRRARPSRRGARLRRSPTLMPTFLLLLLVAPSATFRFSFAATNFPSGTATGDGRLEVYNSISRGGFFSETWDVHHSKSKMRVRQVPGDGSCLFHAIYVALAYATNGSHPQEDYEAMCKAAGVLRQTALDYLSDDPSRLLTVTYNQDMKSQELLDMTSKEMGLSAEQYLVRLRDPKEWGGGLEIVALANALERPIFLYELKPVGLLFWSRF 239
            MKDTPCLSSLPATQYCSSFPWPLSMISVSTRRARPSRRGARLRRSPTLMPTFLLLLLVAPSATFRFSFAATNFPSGTATGDGRLEVYNSISRGGFFSETWDVHHSKSKMRVRQVPGDGSCLFHAIYVALAYATNGSHPQEDYEAMCKAAGVLRQTALDYLSDDPSRLLTVTYNQDMKSQELLDMTSKEMGLSAEQYLVRLRDPKEWGGGLEIVALANALERPIFLYELKPVGLLFWSR 
Sbjct:    1 MKDTPCLSSLPATQYCSSFPWPLSMISVSTRRARPSRRGARLRRSPTLMPTFLLLLLVAPSATFRFSFAATNFPSGTATGDGRLEVYNSISRGGFFSETWDVHHSKSKMRVRQVPGDGSCLFHAIYVALAYATNGSHPQEDYEAMCKAAGVLRQTALDYLSDDPSRLLTVTYNQDMKSQELLDMTSKEMGLSAEQYLVRLRDPKEWGGGLEIVALANALERPIFLYELKPVGLLFWSRL 239          
BLAST of EWM29571.1 vs. NCBI_GenBank
Match: gi|553187201|ref|XP_005854563.1| (putative protein conserved in bacteria with a cystatin-like fold containing protein [Nannochloropsis gaditana CCMP526] >gi|553188032|ref|XP_005854721.1| putative protein conserved in bacteria with a cystatin-like fold containing protein [Nannochloropsis gaditana CCMP526] >gi|422294334|gb|EKU21634.1| putative protein conserved in bacteria with a cystatin-like fold containing protein [Nannochloropsis gaditana CCMP526] >gi|422294494|gb|EKU21794.1| putative protein conserved in bacteria with a cystatin-like fold containing protein [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 382.874 bits (982), Expect = 1.089e-128
Identity = 188/188 (100.00%), Postives = 188/188 (100.00%), Query Frame = 0
Query:  371 MLLAKSLATQSLRLQASITAKKAFPVHLLSTVRETIPSRPSHKQVVAEVAATTEKWLETVTGQKPTSPAETAALYAKDGVLWATVSTELRVNPKEIRDYFDVFARLPNLKVSDYKPYIRVYGDIALNDGYYTVTFDSPEGKKVTKARYVFVYKRDEASGAWEIIDHHSSAMPVAPAGLKKATTVAPPS 558
            MLLAKSLATQSLRLQASITAKKAFPVHLLSTVRETIPSRPSHKQVVAEVAATTEKWLETVTGQKPTSPAETAALYAKDGVLWATVSTELRVNPKEIRDYFDVFARLPNLKVSDYKPYIRVYGDIALNDGYYTVTFDSPEGKKVTKARYVFVYKRDEASGAWEIIDHHSSAMPVAPAGLKKATTVAPPS
Sbjct:    1 MLLAKSLATQSLRLQASITAKKAFPVHLLSTVRETIPSRPSHKQVVAEVAATTEKWLETVTGQKPTSPAETAALYAKDGVLWATVSTELRVNPKEIRDYFDVFARLPNLKVSDYKPYIRVYGDIALNDGYYTVTFDSPEGKKVTKARYVFVYKRDEASGAWEIIDHHSSAMPVAPAGLKKATTVAPPS 188          
BLAST of EWM29571.1 vs. NCBI_GenBank
Match: gi|585106548|gb|EWM24920.1| (uncharacterized protein Naga_100092g2 [Nannochloropsis gaditana])

HSP 1 Score: 172.94 bits (437), Expect = 2.235e-47
Identity = 84/148 (56.76%), Postives = 108/148 (72.97%), Query Frame = 0
Query:  413 KQVVAEVAATTEKWLETVTGQKPTSPAETAALYAKDGVLWATVSTELRVNPKEIRDYFDVFARLPNLKVSDYKPYIRVY-----GDIALNDGYYTVTFDSPEGKKVTK-ARYVFVYKRDEASGAWEIIDHHSSAMPVAPAGLKKATTV 554
            ++V  EV  TT++WL+TVT  + T+ AETAALYA D VLW TVS ELRVNP EIR YFD FA LP L+V+ Y+PY+R++     G+ A+NDGYY   +  P+G++V K ARY FVY+++   G W I+DHHSS +P APAGL KATTV
Sbjct:   39 ERVKQEVLQTTQEWLQTVTSNRATASAETAALYASDAVLWGTVSEELRVNPAEIRSYFDFFAALPGLRVAAYQPYVRIFGTGNEGETAINDGYYVFAWRGPDGREVQKHARYSFVYRKE--GGKWMIVDHHSSLLPTAPAGLAKATTV 184          
BLAST of EWM29571.1 vs. NCBI_GenBank
Match: gi|553185748|ref|XP_005854298.1| (putative protein conserved in bacteria with a cystatin-like fold containing protein [Nannochloropsis gaditana CCMP526] >gi|553190747|ref|XP_005855250.1| putative protein conserved in bacteria with a cystatin-like fold containing protein [Nannochloropsis gaditana CCMP526] >gi|422293807|gb|EKU21107.1| putative protein conserved in bacteria with a cystatin-like fold containing protein [Nannochloropsis gaditana CCMP526] >gi|422294759|gb|EKU22059.1| putative protein conserved in bacteria with a cystatin-like fold containing protein [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 171.014 bits (432), Expect = 1.224e-46
Identity = 84/148 (56.76%), Postives = 107/148 (72.30%), Query Frame = 0
Query:  413 KQVVAEVAATTEKWLETVTGQKPTSPAETAALYAKDGVLWATVSTELRVNPKEIRDYFDVFARLPNLKVSDYKPYIRVY-----GDIALNDGYYTVTFDSPEGKKVTK-ARYVFVYKRDEASGAWEIIDHHSSAMPVAPAGLKKATTV 554
            ++V  EV  TT+KWL+TVT  + T+ AETAALYA D VLW TVS ELRVNP EIR YFD FA LP L+V+ Y+PY+R++     G+ A+NDGYY   +  P+G++V K ARY FVY+++     W I+DHHSS +P APAGL KATTV
Sbjct:   39 ERVKQEVLQTTQKWLQTVTSNRATASAETAALYASDAVLWGTVSEELRVNPAEIRSYFDFFAALPGLRVAAYQPYVRIFGTGNEGETAINDGYYVFAWRGPDGREVQKHARYSFVYRKEGEK--WMIVDHHSSLLPTAPAGLAKATTV 184          
BLAST of EWM29571.1 vs. NCBI_GenBank
Match: gi|585106549|gb|EWM24921.1| (uncharacterized protein Naga_100092g2 [Nannochloropsis gaditana])

HSP 1 Score: 174.481 bits (441), Expect = 4.158e-46
Identity = 84/148 (56.76%), Postives = 108/148 (72.97%), Query Frame = 0
Query:  413 KQVVAEVAATTEKWLETVTGQKPTSPAETAALYAKDGVLWATVSTELRVNPKEIRDYFDVFARLPNLKVSDYKPYIRVY-----GDIALNDGYYTVTFDSPEGKKVTK-ARYVFVYKRDEASGAWEIIDHHSSAMPVAPAGLKKATTV 554
            ++V  EV  TT++WL+TVT  + T+ AETAALYA D VLW TVS ELRVNP EIR YFD FA LP L+V+ Y+PY+R++     G+ A+NDGYY   +  P+G++V K ARY FVY+++   G W I+DHHSS +P APAGL KATTV
Sbjct:  183 ERVKQEVLQTTQEWLQTVTSNRATASAETAALYASDAVLWGTVSEELRVNPAEIRSYFDFFAALPGLRVAAYQPYVRIFGTGNEGETAINDGYYVFAWRGPDGREVQKHARYSFVYRKE--GGKWMIVDHHSSLLPTAPAGLAKATTV 328          
BLAST of EWM29571.1 vs. NCBI_GenBank
Match: gi|299469679|emb|CBN76533.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 173.326 bits (438), Expect = 4.664e-45
Identity = 87/206 (42.23%), Postives = 120/206 (58.25%), Query Frame = 0
Query:   90 ISRGGFFSETWDVHHSKSKMRVRQVPGDGSCLFHAIYVALAYATNGSHPQEDYEAMCKAAGVLRQTALDYLSDDPSRLLTVTYNQDMKSQELLDMTSKEMGLSAEQYLVRLRDPKEWGGGLEIVALANALERPIFLYELKPVGLLFWSRFVFKKMVECGMPKFSPKKSLHILIADCNFPDCAPYFYNKAGNHFLALFPCEDASTVP 295
            I R GF ++++ V    + M VRQVPGDG+CLFHAI   L +A NG+HP  D   +   +  LR+ A+DYL D+  + L +   + +   ELL + + +  ++AE Y   +R    WGGG EIVAL+NAL RPI +YEL   G+     F F++M   G P F  K+++HIL AD  FP+  P      GNHFLALFPC +    P
Sbjct:   31 IKRDGFLTDSFAVQGISTNMAVRQVPGDGNCLFHAISACLDHACNGTHPSLDLSELMPKSAALRKVAVDYLVDNLKKTLYLEKEESVPVYELLSVVAAQYNMTAEHYCEVMRQSSVWGGGPEIVALSNALCRPIHVYELASNGV----SFCFRRMACFGSPSFDDKQAIHILSADSRFPNLKPGRQLANGNHFLALFPCPETVASP 232          
BLAST of EWM29571.1 vs. NCBI_GenBank
Match: gi|738538870|ref|WP_036487251.1| (cystatin [Myxosarcina sp. GI1])

HSP 1 Score: 141.354 bits (355), Expect = 1.856e-35
Identity = 82/183 (44.81%), Postives = 107/183 (58.47%), Query Frame = 0
Query:  371 MLLAKSLATQSLRLQASITAKKAFPVHLLSTVRETIPSRPSHKQVV---AEVAATTEKWLETVTGQKPTSPAETAALYAKDGVLWATVSTELRVNPKEIRDYFDVFARLPNLKVSDYKPYIRVYG-DIALNDGYYTVTFDSPEGKKVTKARYVFVYKRDEASGAWEIIDHHSSAMPVAPAGLK 549
            M+L+++ + Q+ R       KK F    ++ +  TI    S  Q      EVA TT+ WL TVT        E  ALYA+DGVLW TVS ++R  P EI DYF+ FARLP L VS YK  +R+Y  D+A+N GYYT TF      K   ARY FVY+++  +  WEII+HHSSA+P AP  L+
Sbjct:    1 MILSQNSSFQTGR-GLVWNKKKLFSFIFVTALLVTITPLSSFAQTEKAEQEVAETTDTWLNTVTSGSEGVVDEVVALYAEDGVLWGTVSEQVRDTPAEIGDYFEFFARLPELSVSSYKGCVRMYDEDLAINSGYYTFTFSENGQTKEVPARYSFVYQKN-GNNQWEIIEHHSSALPEAPETLE 181          
BLAST of EWM29571.1 vs. NCBI_GenBank
Match: gi|1186534701|ref|WP_085435675.1| (DUF4440 domain-containing protein [unicellular cyanobacterium SU2])

HSP 1 Score: 139.813 bits (351), Expect = 8.580e-35
Identity = 79/186 (42.47%), Postives = 104/186 (55.91%), Query Frame = 0
Query:  371 MLLAKSLATQSLRLQASITAKKAFPVHLLSTVRETIPSRP-----SHKQVVAEVAATTEKWLETVTGQKPTSPAETAALYAKDGVLWATVSTELRVNPKEIRDYFDVFARLPNLKVSDYKPYIRVYGD-IALNDGYYTVTFDSPEGKKVTKARYVFVYKRDEASGAWEIIDHHSSAMPVAPAGLKK 550
            M L+K LA  S      +   +   +  +S     I   P       ++   EVA  T+ WL TVT        E  ALYA+DGVLW TVS ++R  P EIRDYF  FA+LP+L VS YK  +R++ D +A+N GYYT T+      K   ARY FVY++D  +  WEII+HHSSA+P AP  L+K
Sbjct:    1 MSLSKDLAISSCFKFFDLVGNRKKLISFISVTALLIAMTPLSSFAQMEKAEKEVAEMTDIWLNTVTSGSEEVVDEVVALYAEDGVLWGTVSEQVRDTPAEIRDYFQYFAKLPDLSVSSYKGCVRMHDDNLAINTGYYTFTYSKDGRTKEVPARYSFVYQKD-GNNKWEIIEHHSSALPEAPEALQK 185          
BLAST of EWM29571.1 vs. NCBI_GenBank
Match: gi|518336514|ref|WP_019506721.1| (hypothetical protein [Pleurocapsa sp. PCC 7319])

HSP 1 Score: 139.428 bits (350), Expect = 1.106e-34
Identity = 71/142 (50.00%), Postives = 92/142 (64.79%), Query Frame = 0
Query:  413 KQVVAEVAATTEKWLETVTGQKPTSPAETAALYAKDGVLWATVSTELRVNPKEIRDYFDVFARLPNLKVSDYKPYIRVYGD-IALNDGYYTVTFDSPEGKKVTKARYVFVYKRDEASGAWEIIDHHSSAMPVAPAGLKKATT 553
            K+   EVA +T+ WL+TVT        E  ALYA+DGVLW TVS ++R  P EI DYF+ FA+LP L VS YK  +RVY + +A+N GYYT T+      KV  ARY FVY +  ++  WEII+HHSSA+P AP  L+  +T
Sbjct:   53 KKAEKEVAQSTDIWLDTVTSGSEEVVDEVVALYAEDGVLWGTVSEQVRSTPVEISDYFEYFAKLPELSVSSYKGCVRVYDENVAINTGYYTFTYSKDGQTKVVPARYSFVYHKG-SNNQWEIIEHHSSALPEAPETLETVST 193          
The following BLAST results are available for this feature:
BLAST of EWM29571.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585112142|gb|EWM29571.1|0.000e+0100.00uncharacterized protein Naga_100006g11 [Nannochlor... [more]
gi|553188044|ref|XP_005854725.1|2.182e-17299.58hypothetical protein NGA_0375300 [Nannochloropsis ... [more]
gi|553187201|ref|XP_005854563.1|1.089e-128100.00putative protein conserved in bacteria with a cyst... [more]
gi|585106548|gb|EWM24920.1|2.235e-4756.76uncharacterized protein Naga_100092g2 [Nannochloro... [more]
gi|553185748|ref|XP_005854298.1|1.224e-4656.76putative protein conserved in bacteria with a cyst... [more]
gi|585106549|gb|EWM24921.1|4.158e-4656.76uncharacterized protein Naga_100092g2 [Nannochloro... [more]
gi|299469679|emb|CBN76533.1|4.664e-4542.23conserved unknown protein [Ectocarpus siliculosus][more]
gi|738538870|ref|WP_036487251.1|1.856e-3544.81cystatin [Myxosarcina sp. GI1][more]
gi|1186534701|ref|WP_085435675.1|8.580e-3542.47DUF4440 domain-containing protein [unicellular cya... [more]
gi|518336514|ref|WP_019506721.1|1.106e-3450.00hypothetical protein [Pleurocapsa sp. PCC 7319][more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna1157rna1157Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications