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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100006g69.8637.mrna |
| Orig protein id | gnl|cribi|Naga_100006g69.8637 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002456.1 | supercontig | CM002456.1:1174501..1177218 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna1098 ID=rna1098|Name=rna1098|organism=Nannochloropsis gaditana|type=mRNA|length=1140bp
ATGAGACAAAGAACGATAATCATTCCAACGACTTTGTGGACTTTGGTTAT
GCAATTGGTGGTCGGAAACTGTGCAGCAACACGTTGTTCCTCTTCGTGCT
TCCTTTCTTCAAGTGCATTGTTTTCCTCCGTCCATGGCGGAAGAAAGGTA
CCTTTGCATCAACAATTCCGACTTCATAGTCGTAATATGATGGCTTATAG
CAACAAGCATGGCTCCACCGGAAGACGTCGAGTGAAGGATGTGCTACGGC
CTCCGTTACCTCCACAAACCGCGGTCCAAGGGAACAAATGGGCGGAGGAA
ATCAGCCCTGCGAGCTTGAAACAAAAGTTTACGCAGCAACCTTTCCAACG
AGTGATACCACTTATCACGCTAGTGACCTTCGTGGGATATGTCTTTGTCT
CTCCCTATGCCCCTGGGTCAGTCCCCAACATGCTGGACAGCGCCGTTCTC
AAGACCGTGGGTGGGCTCACGCTCAATTACTTCAATGTACTGCCTACTCT
CCTCCCTGACCTTGCTCCTCGTTTTTCTCCTGTTATGGAGGGGGTGTTCA
ATCTTTTACTGGCGTACGCTGCATTGCTCAGCGGCTTTTTGGTCGACGGC
CGCCAGGCTGCAGATCCTGCCTCTGTCAACTCGGACAGTCCAGGCGGTAT
CAATTTTTTCTTCCCTTTCGCTGCAGCGGGCCTGGCGCTGACGAACACCG
CTTTCTTGCCTTACCTTATCCTGCGTCCGCTGCACAAGGTGGACAAACCT
GTCATGCAAGAGGAGGTACCTGAAATCGAGCTGAAGCTTGGCGAGTCGAA
ACCTTTGTTGTCCGTGTACGGGGTGGCCGGCTTGTACAGTATCTGGTGGG
CATTTTTCGGTCGTCCAGAATTCGGAGGCCTTACAGAACGCTGGGCGAGC
TTCACGGACCTGGTCTCTTCGGACAGATTGATGTTCGCCTTCTCGGTCGA
AGCCGTCCTGTATTGGATCTTTCAAGGCTGGCTGGTCGATGATGACATGC
GTCGGCGCGCCGCAGTCTCTGAAGGCGTGGTTCCTTGGATCGCAAAAACC
GTGCCCTTTTTGGGACTCTTTGTGTACATGCTCTGGCGGCCCCCATTGTT
GAGCCAACAAAGCGAGGAACCCGGCCGACAAAGGGGCTGA back to topprotein sequence of rna1098 >rna1098-protein ID=rna1098-protein|Name=rna1098|organism=Nannochloropsis gaditana|type=polypeptide|length=554bp
MKGHECPTAEGEGKSPSLDETPDMDVASTAMQEIELPTTRHNSPLENASP
GSSLCFVPGESCRLTSKEFFSSSDLGTTVDDDVNGDYLDSIIPEEKPAHP
DELLQRIYTILIAGTGFLADSYDLFVINIVLLMMRQNESYGPLTPDVQTH
VSFMAIVGAMAGQLGFGFLGDQYGRRRMFLLTAALTIVGNVLQATAQPRQ
SMGIYQQMMLYRFIMGMGVGGEYPAAGTITSENSTAWQRGRNLAAVFSMQ
GVGRLLCALVLLISAFTIENTDLQWRVAIIVGALPMMAAIFFRWLPETDA
FRHHVEARYPNMRLRFKNIWRTVWENRRALAGTAGSWFILDMLFYGNSLF
SADVTETMGFGSGIRGRTVQNLIIQSMAMPGYILAVIFIDRIGKKRLQLI
GFFGEGLIFGFMAAYQSPLKQAPVVFLLMYALTFLFDNFGANTATFVIPA
VIYPTEARSTCHGISAAAGKAGAVVGASAFLRLVSMYCPNHICSENVDPA
LIDKGIRTVFYWCAVLSLVGFLWTCIFVHDRSHKSLDCKAPLTAPVGSPE
YEMA back to topmRNA from alignment at CM002456.1:1174501..1177218- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna1098 ID=rna1098|Name=rna1098|organism=Nannochloropsis gaditana|type=mRNA|length=2718bp|location=Sequence derived from alignment at CM002456.1:1174501..1177218- (Nannochloropsis gaditana)
AGGACATCAGAAGACAGGGAAAACAAGGCGTGCATGATTGCCTCGTGAAA
CCACCGTCAATAGCTTACCACCATAATGGCGCCGGCATTGGTGCGGTATT
TATGGCCTATTCAGTGGCTTTTACGCGGCCCGTCGGGTCAACTCTGTTGG
AGCTCGGTCGGCCTCCATCTTTCTCGAGGGGGGCCTCGCAAAGCAATTCG
TCAAGGCCTTAATATGCTTTCATGGCCCGCGACGATGCAGAATGTCGGCA
TCTGCGCCTGTAATGTACTCACTATGATTAGTTTTTACTGACACATGGGT
GGTTTTTGTGCCCTTGTTGGTTGCCACGAGCAGAAACATCAACATAAAAC
TGAATGCCCAGCTTGCCTGCTGGTTGAGGCGTCCGGCTGAGCATAGCGAC
ATAGTCGAGGGTGGTAGCGGCACTACCCTCTCTGCGGGTCACACGCACGG
TATTAACGTTGCTCGTGCTCAGACATTCGTTTCCTATCGTTGCCACGAAT
CTCACGTCTTACGCAGGGGACATGAAAGGGCATGAGTGTCCCACGGCGGA
AGGTGAAGGGAAATCACCTTCGTTGGATGAGACTCCGGACATGGACGTCG
CCTCTACCGCCATGCAAGAGATTGAACTACCCACCACACGGCACAATTCT
CCTCTAGAGAATGCGTCACCAGGTTCATCCCTTTGTTTTGTTCCGGGGGA
AAGCTGCCGGCTCACGTCCAAGGAGTTCTTCTCCTCGTCCGATCTGGGCA
CGACCGTCGATGACGACGTGAATGGGGATTACCTTGATAGCATTATCCCA
GAAGAAAAGCCGGCACATCCCGATGAACTGCTGCAGCGTATCTACACCAT
TTTAATCGCTGGAACAGGTTTCTTGGCGGATAGCTACGACCTGTTCGTGA
TCAACATCGTGCTGCTGATGATGAGACAAAACGAGAGCTACGGACCTCTG
ACACCAGATGTGCAAACCCACGTTTCCTTCATGGCTATCGTGGGAGCGAT
GGCAGGGCAACTCGGTTTCGGATTTTTGGGAGACCAGTACGGGCGCCGGC
GCATGTTCCTGTTAACGGCAGCTTTGACAATAGTAGGAAATGTTTTACAG
GCAACGGCCCAGCCAAGACAGAGCATGGGCATCTACCAACAAATGATGCT
TTATCGCTTCATTATGGGTATGGGGGTAGGAGGGGAATATCCTGCCGCTG
GAACAATCACCTCAGAAAACTCGACGGCCTGGCAGCGGGGCAGGAACCTT
GCGGCCGTCTTCTCCATGCAAGGCGTGGGTAGGCTGCTCTGCGCCCTGGT
CCTACTGATCTCTGCCTTCACGATCGAGAACACCGACCTGCAATGGCGCG
TGGCGATTATTGTGGGCGCGCTACCGATGATGGCGGCCATTTTCTTCCGT
TGGCTGCCGGAGACGGACGCGTTTCGGCACCACGTGGAGGCCCGCTACCC
CAACATGCGGCTGCGTTTCAAGAACATTTGGAGGACCGTGTGGGAAAATC
GGCGGGCCTTGGCCGGGACGGCTGGCTCTTGGTTTATTTTGGACATGCTC
TTCTACGGGAATTCCCTCTTCTCTGCAGACGTGACCGAGACCATGGGCTT
TGGAAGTGGGATCCGTGGGCGGACGGTGCAGAATTTGATCATTCAATCTA
TGGCGATGCCAGGTTACATCTTGGCCGTCATTTTCATCGACCGTATCGGG
AAGAAACGTTTGCAATTGATCGGCTTCTTTGGGGAGGGTTTGATCTTTGG
GTTCATGGCAGCGTATCAGTCACCTTTGAAACAGGCGCCCGTAGTATTCC
TTTTAATGTACGCGCTCACTTTCCTGTTCGACAACTTCGGTGCCAACACC
GCCACATTCGTCATTCCAGCTGTGATTTATCCCACGGAAGCGCGTTCTAC
GTGTCATGGGATTTCTGCTGCCGCCGGCAAGGCAGGGGCCGTAGTTGGCG
CCAGCGCCTTCCTGCGCTTGGTAAGCATGTACTGTCCTAATCACATCTGC
TCGGAAAATGTTGATCCCGCTCTCATTGACAAGGGTATCCGGACAGTTTT
TTACTGGTATGTACGAAGGGGTGCGAGTAGGGAGGCCTCGTGGAGGGAGG
GGACGTGAAGAGCCCGAGAGGAATGTTCGGGATCAAGACGATTGATCAGT
GCGCATGTGCTCTCACGTGCGCGTCCTCGACCACGGCCACATACATTGTC
AAGATGATATAATAAAATTTCTACCCTTCTCTACCCTATCCTCCTTGTGG
ACATGCCCGCAGGTGCGCCGTCCTCTCTCTCGTCGGCTTCCTCTGGACAT
GCATTTTCGTCCACGATCGCAGTCACAAGTCTTTGGATTGTAAAGCTCCA
TTAACAGCTCCTGTGGGGTCACCAGAGTACGAGATGGCATAATGAATAAT
GGAGAAGACGCGCCCCGGATGGGCGGGACGGGGGCACATTTGGGGAGCGG
GAGCGTAAATGTGGGTGCGATTTTGCTGAACCCGACATAGGGGGAGGGTG
CGAAATGATGGACAGTAGCTATATGGAAGGCAATGGATTCCTCTGCCACA
TGCTGTTGATAAATTGAAAGACTCATCATCAGGCGTGTGCGGCCTCACTT
CAGATGCGAAAAAAGGTGGAAAGATGCGAGCTTTTTAAAAGGGAGAAGGC
TCACCCGCAGGAAAACATTGTGACAATGTACACTCAGAAGAAACGATGTG
ACACATGTACTGCATGGG back to topCoding sequence (CDS) from alignment at CM002456.1:1174501..1177218- >rna1098 ID=rna1098|Name=rna1098|organism=Nannochloropsis gaditana|type=CDS|length=3330bp|location=Sequence derived from alignment at CM002456.1:1174501..1177218- (Nannochloropsis gaditana)
GTGCGCCGTCCTCTCTCTCGTCGGCTTCCTCTGGACATGCATTTTCGTCC
ACGATCGCAGTCACAAGTCTTTGGATTGTAAAGCTCCATTAACAGCTCCT
GTGGGGTCACCAGAGTACGAGATGGCATAAATGAAAGGGCATGAGTGTCC
CACGGCGGAAGGTGAAGGGAAATCACCTTCGTTGGATGAGACTCCGGACA
TGGACGTCGCCTCTACCGCCATGCAAGAGATTGAACTACCCACCACACGG
CACAATTCTCCTCTAGAGAATGCGTCACCAGGTTCATCCCTTTGTTTTGT
TCCGGGGGAAAGCTGCCGGCTCACGTCCAAGGAGTTCTTCTCCTCGTCCG
ATCTGGGCACGACCGTCGATGACGACGTGAATGGGGATTACCTTGATAGC
ATTATCCCAGAAGAAAAGCCGGCACATCCCGATGAACTGCTGCAGCGTAT
CTACACCATTTTAATCGCTGGAACAGGTTTCTTGGCGGATAGCTACGACC
TGTTCGTGATCAACATCGTGCTGCTGATGATGAGACAAAACGAGAGCTAC
GGACCTCTGACACCAGATGTGCAAACCCACGTTTCCTTCATGGCTATCGT
GGGAGCGATGGCAGGGCAACTCGGTTTCGGATTTTTGGGAGACCAGTACG
GGCGCCGGCGCATGTTCCTGTTAACGGCAGCTTTGACAATAGTAGGAAAT
GTTTTACAGGCAACGGCCCAGCCAAGACAGAGCATGGGCATCTACCAACA
AATGATGCTTTATCGCTTCATTATGGGTATGGGGGTAGGAGGGGAATATC
CTGCCGCTGGAACAATCACCTCAGAAAACTCGACGGCCTGGCAGCGGGGC
AGGAACCTTGCGGCCGTCTTCTCCATGCAAGGCGTGGGTAGGCTGCTCTG
CGCCCTGGTCCTACTGATCTCTGCCTTCACGATCGAGAACACCGACCTGC
AATGGCGCGTGGCGATTATTGTGGGCGCGCTACCGATGATGGCGGCCATT
TTCTTCCGTTGGCTGCCGGAGACGGACGCGTTTCGGCACCACGTGGAGGC
CCGCTACCCCAACATGCGGCTGCGTTTCAAGAACATTTGGAGGACCGTGT
GGGAAAATCGGCGGGCCTTGGCCGGGACGGCTGGCTCTTGGTTTATTTTG
GACATGCTCTTCTACGGGAATTCCCTCTTCTCTGCAGACGTGACCGAGAC
CATGGGCTTTGGAAGTGGGATCCGTGGGCGGACGGTGCAGAATTTGATCA
TTCAATCTATGGCGATGCCAGGTTACATCTTGGCCGTCATTTTCATCGAC
CGTATCGGGAAGAAACGTTTGCAATTGATCGGCTTCTTTGGGGAGGGTTT
GATCTTTGGGTTCATGGCAGCGTATCAGTCACCTTTGAAACAGGCGCCCG
TAGTATTCCTTTTAATGTACGCGCTCACTTTCCTGTTCGACAACTTCGGT
GCCAACACCGCCACATTCGTCATTCCAGCTGTGATTTATCCCACGGAAGC
GCGTTCTACGTGTCATGGGATTTCTGCTGCCGCCGGCAAGGCAGGGGCCG
TAGTTGGCGCCAGCGCCTTCCTGCGCTTGGTAAGCATGTACTGTCCTAAT
CACATCTGCTCGGAAAATGTTGATCCCGCTCTCATTGACAAGGGTATCCG
GACAGTTTTTTACTGGTGCGCCGTCCTCTCTCTCGTCGGCTTCCTCTGGA
CATGCATTTTCGTCCACGATCGCAGTCACAAGTCTTTGGATTGTAAAGCT
CCATTAACAGCTCCTGTGGGGTCACCAGAGTACGAGATGGCATAAATGAA
AGGGCATGAGTGTCCCACGGCGGAAGGTGAAGGGAAATCACCTTCGTTGG
ATGAGACTCCGGACATGGACGTCGCCTCTACCGCCATGCAAGAGATTGAA
CTACCCACCACACGGCACAATTCTCCTCTAGAGAATGCGTCACCAGGTTC
ATCCCTTTGTTTTGTTCCGGGGGAAAGCTGCCGGCTCACGTCCAAGGAGT
TCTTCTCCTCGTCCGATCTGGGCACGACCGTCGATGACGACGTGAATGGG
GATTACCTTGATAGCATTATCCCAGAAGAAAAGCCGGCACATCCCGATGA
ACTGCTGCAGCGTATCTACACCATTTTAATCGCTGGAACAGGTTTCTTGG
CGGATAGCTACGACCTGTTCGTGATCAACATCGTGCTGCTGATGATGAGA
CAAAACGAGAGCTACGGACCTCTGACACCAGATGTGCAAACCCACGTTTC
CTTCATGGCTATCGTGGGAGCGATGGCAGGGCAACTCGGTTTCGGATTTT
TGGGAGACCAGTACGGGCGCCGGCGCATGTTCCTGTTAACGGCAGCTTTG
ACAATAGTAGGAAATGTTTTACAGGCAACGGCCCAGCCAAGACAGAGCAT
GGGCATCTACCAACAAATGATGCTTTATCGCTTCATTATGGGTATGGGGG
TAGGAGGGGAATATCCTGCCGCTGGAACAATCACCTCAGAAAACTCGACG
GCCTGGCAGCGGGGCAGGAACCTTGCGGCCGTCTTCTCCATGCAAGGCGT
GGGTAGGCTGCTCTGCGCCCTGGTCCTACTGATCTCTGCCTTCACGATCG
AGAACACCGACCTGCAATGGCGCGTGGCGATTATTGTGGGCGCGCTACCG
ATGATGGCGGCCATTTTCTTCCGTTGGCTGCCGGAGACGGACGCGTTTCG
GCACCACGTGGAGGCCCGCTACCCCAACATGCGGCTGCGTTTCAAGAACA
TTTGGAGGACCGTGTGGGAAAATCGGCGGGCCTTGGCCGGGACGGCTGGC
TCTTGGTTTATTTTGGACATGCTCTTCTACGGGAATTCCCTCTTCTCTGC
AGACGTGACCGAGACCATGGGCTTTGGAAGTGGGATCCGTGGGCGGACGG
TGCAGAATTTGATCATTCAATCTATGGCGATGCCAGGTTACATCTTGGCC
GTCATTTTCATCGACCGTATCGGGAAGAAACGTTTGCAATTGATCGGCTT
CTTTGGGGAGGGTTTGATCTTTGGGTTCATGGCAGCGTATCAGTCACCTT
TGAAACAGGCGCCCGTAGTATTCCTTTTAATGTACGCGCTCACTTTCCTG
TTCGACAACTTCGGTGCCAACACCGCCACATTCGTCATTCCAGCTGTGAT
TTATCCCACGGAAGCGCGTTCTACGTGTCATGGGATTTCTGCTGCCGCCG
GCAAGGCAGGGGCCGTAGTTGGCGCCAGCGCCTTCCTGCGCTTGGTAAGC
ATGTACTGTCCTAATCACATCTGCTCGGAAAATGTTGATCCCGCTCTCAT
TGACAAGGGTATCCGGACAGTTTTTTACTG back to top
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