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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100006g107.8634.mrna |
| Orig protein id | gnl|cribi|Naga_100006g107.8634 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002456.1 | supercontig | CM002456.1:1073353..1075227 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna1061 ID=rna1061|Name=rna1061|organism=Nannochloropsis gaditana|type=mRNA|length=1285bp
GAGTCGCGACGACACGGCGATGATATAGATGCTCACACAAGAAATATGTT
CGTCCGCCGATGTTTTAGAATGCTTGTGGTCCGTTGTACAACAATAATAT
ATAACCTAGAGGCGTGTAATCCGCTTGAGGTCTTTCCGGGACGAATTTTT
ACATCTAGGAGCTACTCGATTCTCCCTCGTATGTCGAGATCCCTGCATGT
GTGAGCCCCGGCCTCTGTTCCAGCAACTCACCATCCACCAGAGATGATTG
TCGAGATAAAAAACTTGATGATGCTTTATCACAATCACATGACTGAAAAC
ATGTGTGATTGCGCTTGATTCTGCGATATTGCCTGTCATTTCTGACACGC
GTTACTCCCTTCAAGCACCCTCCTAGGACTTTAAGAACAAAGTGAACAAC
ATAGCGACATAGTATCATTCGGTCAAAAGCAGAATCTATCGGCTAATGGT
GCTTTCCGCGGGCACTCGTCGGCTTTTTAACCCCTCACAAAGTGTTTTCT
ACGTGCGTGCCGCGGTTTGCAAGCCAGTTCAGCCCTATCGACGCTGTGGG
TTGTCCGCCTTGGTCCGCACACTTCGACGAGAGCATTCGACCGCATTCAT
TCCGACGCATCGACGACTATCGACAGCCGACGGCAGTGGTGACAATGGGA
CGCAGAGCCATGACCCACCACATTTCAAACTGATTTTGCCGGACATAGGT
CAGACAAGCAAAACAGGCAACCTCACTCGGTGGAGGAAAGCGGAGGGCGA
CGTGATCAAAAACGGGGACGTGGTCTGCGAAGTGGAAATGGACCAATTTA
ACGTGGGCATGGAGGTTGACGACAAGGGCTACCTGGCCCGTATTTTGGTT
CCGGCAGGGACGCGAGGAGTGCCCGCGGGTGAAGCTTTGGCAGTGTTTGT
CTACGAGGAGCAGTACAAGGACGCCTTCAGCTCCTTGCCTCGCTACCACG
CAGGGGGAGGGGGAGCGTCAGAGGCGAGTGCGGGGGCGGAGGAAGGCGAG
ATGGCGATCGACGGGGTCTCGCTCTTGAAGTTCTTGCACAAGCTTGTGCG
GAATGGATCAATCAAGGATAAAGAGTTTGCGCAGAAGCTCCAAACCCTGG
CCCGGCACGAAGACAAGCAGCTTTTGCGTGTGTTCGAAGCGAGCTTTGAG
GGGGAGGGTCCTCGGAGGGAGGAGGACTTCGACCTCGAGTTCTTCTTGGA
GGAGGGGCGGGGGGTGGTGCACGACATGGAGGCGGCCATGTGCAAGGCAG
GGGAGGAGGGGAAAGGGGAGCCGGTTGAAAAATAG back to topprotein sequence of rna1061 >rna1061-protein ID=rna1061-protein|Name=rna1061|organism=Nannochloropsis gaditana|type=polypeptide|length=551bp
MMPGPCGVGGLAGRSDHIASRLSRLSTFSFSVLAVRTWPFLAMLVSHLQP
AQPFQRRPPPPPPSSPPPSFPSKPPLPFSSRLANQGNSASTRSSWPSSQV
SSSPWESTTFLSTADPAPEDNGPFRLLFDQATDRFLFQTAVVDLQQPGQD
GPRVRLIGSVHIAEPAYFKALEASCADCDVVLYEMITSEGNVLRDGTDAR
WPSKEQLGVELQATDGLRRLASSHGLEPQLDNMHFFGKKNWYLSDIVREE
LCKLQRLRGERTLDAPAKGRLGHVFEVLEVFWNGFTSRGKVLPKFLFLRP
GQAFSALPFRVLRLCMWLTPAPELQLLLLDWARQYPPAGGLSRVLRSMVG
ALVQGDFLTLRRLAFAQMLTSSQTAPAPEVLVQERDSKVVLDVEQALRTG
AKDVGVLYGGLHLKDIEAKLRGHLNFTRVEGGMEKGAGGQETLKRGREAQ
AVQWHTAWTMQAFTRQRQALVTALCVALPALYLSVGGLDWSATFGGLAKD
VSQHVATEGTAAEAPTVGWQEVVLYMLRHMYIYYGLSRWVVEWEKQLFEM
R back to topmRNA from alignment at CM002456.1:1073353..1075227+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna1061 ID=rna1061|Name=rna1061|organism=Nannochloropsis gaditana|type=mRNA|length=1875bp|location=Sequence derived from alignment at CM002456.1:1073353..1075227+ (Nannochloropsis gaditana)
GTCGTAATGAAATCCTGTCTAAACTTGGCTTCCGCAAAACACACTTCATT
TGTCAGGCACAGTCGCAATGATGCCAGGCCCTTGCGGTGTCGGCGGCCTT
GCGGGTCGCAGTGATCACATCGCGTCACGTTTGTCGCGGCTTTCAACTTT
TTCGTTTTCCGTGCTGGCAGTGCGGACATGGCCATTCCTCGCCATGCTTG
TCTCCCACCTCCAGCCCGCGCAACCCTTTCAAcgtcgtccacctcctcca
cctccgtcctctcccccgccctcttttccaaGCAAACCACCATTGCCGTT
CTCCTCCCGGTTGGCGAACCAGGGCAACAGCGCCAGCACCCGGTCCTCCT
GGCCTTCCTCACAggtttcctcttctccgtggGAGAGCACaaccttcctt
tccaccgcGGATCCGGCGCCGGAGGACAACGGtccctttcgcctcctctt
cgaccaGGCCACTGAccgctttctttttcagACGGCCGTCGTCGACCTCC
AGCAACCGGGACAAGACGGACCTCGCGTCCGGCTGATTGGCAGCGTGCAC
ATCGCGGAGCCCGCCTATTTCAAGGCGTTGGAGGCGTCCTGCGCGGACTG
TGACGTGGTCCTGTACGAAATGATTACCTCGGAAGGGAACGTGCTGAGGG
ACGGAACTGACGCCCGGTGGCCCTCCAAGGAGCAACTGGGCGTGGAGCTT
CAAGCCACTGACGGCCTGCGtcgcctcgcttcctcccacggcctGGAGCC
TCAGCTGGACAACATGCATTTCTTCGGCAAGAAGAACTGGTACCTGTCGG
ACATCGTACGGGAGGAACTCTGCAAGTTGCAGCGGTTGCGGGGAGAGCGC
ACCCTGGACGCGCCGGCCAAAGGGCGCTTGGGCCACGTTTtcgaggtgct
ggaggtctTCTGGAACGGGTTCACGTCCCGGGGGAAGGTCCTCCCCAAGT
TCCTTTTCTTGCGGCCGGGACAGGCGTTCTCGGCCTTGCCCTTCCGCGTC
CTTCGCTTGTGTATGTGGTTGACACCCGCGCCGGAGCTGCAGCTGCTCCT
GTTGGACTGGGCGCGTCAGTACCCTCCCGCGGGCGGTCTGAGCCGCGTCT
TGCGGTCCATGGTAGGGGCGTTGGTCCAAGGGGACTTTTTGACGCTGCGT
CGGCTCGCGTTCGCGCAGATGCTGACCTCGAGTCAAACGGCGCCCGCGCC
GGAGGTGCTGGTTCAGGAACGGGACTCGAAGGTggtgctggacgtggagc
aGGCCCTGCGGACCGGCGCCAAGGACGTCGGGGTGCTCTACGGGGGCCTG
CATTTGAAAGATATTGAAGCGAAGCTGCGAGGACATTTAAATTTCACGCG
TGTCGAAGGCgggatggaaaaaggggcggggggccaAGAGACGCTcaaaa
gggggagggaggcgcaggcGGTGCAGTGGCATACAGCCTGGACGATGCAG
GCATTTACCCGGCAACGACAGGCCCTGGTAACCGCACTGTGCGTGGCCTT
GCCGGCTCTGTACCTGAGTGTGGGAGGGTTGGATTGGAGTGCCACGTTTG
GAGGCCTGGCAAAGGACGTGTCGCAGCATGTGGCAACTGAAGGCACCGCG
GCTGAGGCGCCAACAGTTGGGTGGCAAGAAGTAGTGCTCTACATGCTGCG
GCACATGTACATTTACTACGGACTTTCTCGCTGGGTAGTCGAGTGGGAGA
AACAGTTGTTTGAGATGCGCTGAGCTGCAGCGTTGTATAAGAGCTTTTTG
TCGAAattgggtggggaggttggagatGTAGATTGTCAATTTGTGATATT
AGACCGCGACATGGTCGCGCAACAGTCAAATTCGGCTTCAAAGCAATGTA
AATTTGACCATTTGTCGAGTCCGGA back to topCoding sequence (CDS) from alignment at CM002456.1:1073353..1075227+ >rna1061 ID=rna1061|Name=rna1061|organism=Nannochloropsis gaditana|type=CDS|length=1656bp|location=Sequence derived from alignment at CM002456.1:1073353..1075227+ (Nannochloropsis gaditana)
ATGATGCCAGGCCCTTGCGGTGTCGGCGGCCTTGCGGGTCGCAGTGATCA
CATCGCGTCACGTTTGTCGCGGCTTTCAACTTTTTCGTTTTCCGTGCTGG
CAGTGCGGACATGGCCATTCCTCGCCATGCTTGTCTCCCACCTCCAGCCC
GCGCAACCCTTTCAAcgtcgtccacctcctccacctccgtcctctccccc
gccctcttttccaaGCAAACCACCATTGCCGTTCTCCTCCCGGTTGGCGA
ACCAGGGCAACAGCGCCAGCACCCGGTCCTCCTGGCCTTCCTCACAggtt
tcctcttctccgtggGAGAGCACaaccttcctttccaccgcGGATCCGGC
GCCGGAGGACAACGGtccctttcgcctcctcttcgaccaGGCCACTGAcc
gctttctttttcagACGGCCGTCGTCGACCTCCAGCAACCGGGACAAGAC
GGACCTCGCGTCCGGCTGATTGGCAGCGTGCACATCGCGGAGCCCGCCTA
TTTCAAGGCGTTGGAGGCGTCCTGCGCGGACTGTGACGTGGTCCTGTACG
AAATGATTACCTCGGAAGGGAACGTGCTGAGGGACGGAACTGACGCCCGG
TGGCCCTCCAAGGAGCAACTGGGCGTGGAGCTTCAAGCCACTGACGGCCT
GCGtcgcctcgcttcctcccacggcctGGAGCCTCAGCTGGACAACATGC
ATTTCTTCGGCAAGAAGAACTGGTACCTGTCGGACATCGTACGGGAGGAA
CTCTGCAAGTTGCAGCGGTTGCGGGGAGAGCGCACCCTGGACGCGCCGGC
CAAAGGGCGCTTGGGCCACGTTTtcgaggtgctggaggtctTCTGGAACG
GGTTCACGTCCCGGGGGAAGGTCCTCCCCAAGTTCCTTTTCTTGCGGCCG
GGACAGGCGTTCTCGGCCTTGCCCTTCCGCGTCCTTCGCTTGTGTATGTG
GTTGACACCCGCGCCGGAGCTGCAGCTGCTCCTGTTGGACTGGGCGCGTC
AGTACCCTCCCGCGGGCGGTCTGAGCCGCGTCTTGCGGTCCATGGTAGGG
GCGTTGGTCCAAGGGGACTTTTTGACGCTGCGTCGGCTCGCGTTCGCGCA
GATGCTGACCTCGAGTCAAACGGCGCCCGCGCCGGAGGTGCTGGTTCAGG
AACGGGACTCGAAGGTggtgctggacgtggagcaGGCCCTGCGGACCGGC
GCCAAGGACGTCGGGGTGCTCTACGGGGGCCTGCATTTGAAAGATATTGA
AGCGAAGCTGCGAGGACATTTAAATTTCACGCGTGTCGAAGGCgggatgg
aaaaaggggcggggggccaAGAGACGCTcaaaagggggagggaggcgcag
gcGGTGCAGTGGCATACAGCCTGGACGATGCAGGCATTTACCCGGCAACG
ACAGGCCCTGGTAACCGCACTGTGCGTGGCCTTGCCGGCTCTGTACCTGA
GTGTGGGAGGGTTGGATTGGAGTGCCACGTTTGGAGGCCTGGCAAAGGAC
GTGTCGCAGCATGTGGCAACTGAAGGCACCGCGGCTGAGGCGCCAACAGT
TGGGTGGCAAGAAGTAGTGCTCTACATGCTGCGGCACATGTACATTTACT
ACGGACTTTCTCGCTGGGTAGTCGAGTGGGAGAAACAGTTGTTTGAGATG
CGCTGA back to top
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