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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100022g31.828.mrna |
| Orig protein id | gnl|cribi|Naga_100022g31.828 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002456.1 | supercontig | CM002456.1:726079..727901 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna918 ID=rna918|Name=rna918|organism=Nannochloropsis gaditana|type=mRNA|length=1412bp
CACAGCCAAGTCTGCCAACCTACAACGCGCTAGCCTTGCCAGCTTCTGGT
CACGCGCATGCGTTGTGCGACTTTTTGGGATTCGCAACAAAACGTGATGG
GGCCGGAGACCCTGGCGCCAAGGTCAGCTAGCGATGCCAGACCAGCGCGA
CGCGCAGACTTGGCCCGCCGGTTTTTCACGATGTTTAAATCTGGTTTTAT
GGGCACACGGACAGGCGCGACTAAGGACACCAGCGCGACAGCCGTCTCAG
GCAGCCGCCGCTACAAGGTCATGTCGATAGAGTCCCTTGGGGACGGAGGC
AGTGATGGCAGTGCCGTAAACGGGGCAGGAGGCACAACACCGCAGCTTCC
ATTCCTGCTTAAAGCCTCGGTGGTCAAAGGGTTTGGGAGGGGAAGCAAGC
TACTGGGAATCCCAACAGCAAATCTCAATATGGATCAAGTGGGCCCTGTG
GTGGATTCGTGGCCGAATGGCATTTATTACGGCTTCTCGTGTTTGAAGGG
TGACGTGTACAAGGCCGTTGCCAGTATCGGAACCAATCCCTACTTCAAGA
ACAGCCAGAAGACCGTGGAGCCCCACCTCTTGCACGAGTTCCCAGACGAC
TTCTATGGCGAGGAGCTCAAGTTTTTGGTGTGTGGCTACGTGAGGCCGGA
GAGGTCCTTCGCCTCCTTGGAAGAGCTGGTGGCGGCCATACGCAGCGACA
TAGAGGTCGCGCGAACGGCCTTGGAGGCGCCTGATTGGAGGATGTTGGGG
ACGAGGGAAGCGGCGTGGGCGGGGGGGTGAGGGGAAGGGCCAATTTGGAG
TACGGGGCGATGATAATACTAGCAAGTGTACAGTAACACAGAAGCGATTT
TGATTATGGTCTTGCGTCGGTCACACGGGATGCCGAGCTGAATATATCCT
TTCTGGCCGCAGAAAGCCCCCCCCAGATCGCTCACTCCCTCGCAATAACT
CAGCCCTCGCTCGAGCGCGTCCTCTCTCAGTCGACGATTCTTCCTTTACT
CCCTTTTAGCCTTCTTCAGCTCCCTTCATCTTCTTCCCCGGGCCCCCCTC
GCCCTCCCCGTCCCGAGACCCCTGCCCCTGTCCCCCATCTCCCTCCTTGT
CGGCCTCGCCCCCGTCATCCTCCTCCACTGCGCCTATCTCGCAGCCTCCG
CCATCCCGTTTCCCGGCGTCTCTTCCTGCCTTTTTCCCTCTCTTCCTGGC
CTTGCCTCGGGCGCCCCTCCCCCCCCCTCCTTTCTTACCTCCCCTTCCAC
CCTGCTCCGGCTCTCGGGACCTCTGCGCCTTCCGAAACGCCCTCCACAGA
GAGGCCCCCGACGCCCGGGCCGTGGGCCCCGGGACTGGCTCTGCTAGGAA
AGCTCTGGCGGCTCGACCGGCCCGAGGTGGGAAGGAGTCAGGCAAAGGCC
AGCCCGAAGCGG back to topprotein sequence of rna918 >rna918-protein ID=rna918-protein|Name=rna918|organism=Nannochloropsis gaditana|type=polypeptide|length=569bp
MSLRELIYSQQDDVHGSDCPSTEEQQPIHAPQGLEVANGLLEAAMWRQRS
RDTPRSCRWRGLRPSRRAPLYHWPTSILPDCQDKPVLLHTVLLQRLLTLF
VAARDVAAVATTLGLLHALQPRLEDTSFEGNLWLLTELAAREAGDTPYSG
RDDTNDAEAGARRRLPSAQGPRARRLLLFLRTMMSARIQLPEAADVENGH
KTIAPPNTLRILALAKLVNFLVEGGRLSEAREALQQESFLRPFAASPYLR
SMKALFACLEAGLSDGGGGDGGRGRRFFNDLAAAPSRCFAPGPPQRGSPA
SLRWAQAALEEILRAMDAGKDLQSGLLATSLAMLRMGGGQRRRERVCNLV
LARCQRHPDSPRAQEIAHSASLLARGQDHKATLRHLKRWQALDPSSDRAL
AGLLHAYRRQLLRSYRDPKSPVLLSRPRLTRALIDRLLTLPPPLGPPSLG
PSPLSPHLRYFRLLAAYLGPLPPHRPGGLHREGPGRAPVRLHWGDRGALE
SALAGAYEAWSPGCRGAEGSALELFNVADLGPCPRERAFSYQWDRVLGED
GWPRSRRGGEMERMWALVK back to topmRNA from alignment at CM002456.1:726079..727901- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna918 ID=rna918|Name=rna918|organism=Nannochloropsis gaditana|type=mRNA|length=1823bp|location=Sequence derived from alignment at CM002456.1:726079..727901- (Nannochloropsis gaditana)
ATGTCGTTACGAGAGCTGATATACTCTCAACAAGACGACGTTCATGGGAG
CGACTGTCCTTCAACCGAGGAACAACAGCCGATACATGCACCACAAGGCT
TAGAGGTCGCGAATGGCCTCCTGGAGGCCGCCATGTGGCGGCAGAGGTCA
AGAGACACGCCGAGATCCTGCCGATGGCGGGGCCTCCGACCAAGCAGGCG
GGCGCCCTTGTATCACTGGCCTACGTCCATACTCCCAGACTGCCAAGACA
AACCCGTCCTCTTGCACACGGTACTACTTCAGAGACTGCTGACCTTGTTT
GTGGCAGCACGCGATGTGGCAGCCGTTGCAACCACCCTCGGCCTCTTGCA
TGCGCTGCAGCCCCGCCTGGAGGACACTAGCTTTGAGGGAAATCTATGGC
TTTTGACCGAGCTGGCAGCGCGTGAAGCTGGTGACACTCCATATTCTGGG
AGGGATGACACCAATGACGCGGAGGCCGGGGCGAGGAGGCGACTTCCTTC
TGCACAAGGTCCTCGCGCCCGCCGGCTCCTTCTCTTTCTCCGCACCATGA
TGAGCGCCCGCATCCAGCTCCCAGAGGCAGCGGACGTTGAGAATGGACAT
AAAACCATAGCGCCGCCGAACACTTTGCGGATCCTGGCGCTGGCCAAGCT
CGTAAACTTCCTGGTGGAAGGTGGGCGTCTCTCCGAGGCGAGGGAGGCCT
TGCAACAAGAGTCCTTCTTGCGTCCCTTCGCCGCCAGCCCGTACCTGCGC
TCGATGAAAGCCTTGTTTGCCTGTCTGGAAGCAGGCCTTTCGGACGGCGG
CGGGGGGGACGGAGGGCGGGGCAGGAGGTTCTTCAACGACCTTGCCGCCG
CCCCAAGTCGATGCTTTGCGCCAGGCCCGCCGCAGCGAGGCAGCCCGGCG
TCTCTCCGATGGGCTCAAGCGGCTCTGGAGGAAATCCTCCGCGCTATGGA
CGCAGGAAAAGACCTACAGAGTGGCCTTCTCGCAACCTCCTTGGCCATGC
TCCGTATGGGGGGGGGGCAGAGGCGGAGGGAGCGGGTTTGCAACCTCGTT
CTCGCCCGCTGTCAGCGCCACCCGGACTCTCCTCGCGCCCAGGAAATTGC
CCACTCCGCCTCGCTGCTCGCGCGCGGGCAGGACCACAAGGCCACGCTCA
GGCATTTGAAGCGGTGGCAGGCCCTCGACCCCTCCTCCGACCGAGCCCTG
GCCGGCCTCCTGCATGCCTACCGGCGCCAGCTCCTCCGCTCCTATGTGAG
TACCTCGGGCGAGGGTCGTTCCAAGCCTCGATCTGGGCCTCGGTCTGGCA
TCTCCGCCTCCGCCTCCCTCTCATCCCCCCTTCCTCTTACCCCTCTTTTG
CCTCACAGCGGGACCCAAAGAGCCCCGTTCTCCTCAGCCGCCCCCGCCTC
ACACGCGCCCTGATCGACCGCCTGCTCACGCTCCCCCCCCCCTTGGGCCC
GCCCTCCCTCGGTCCCTCCCCACTGTCGCCGCACCTGCGCTACTTCCGCC
TCCTGGCCGCCTACCTGGGCCCGCTGCCTCCGCACAGGCCCGGGGGTCTC
CACCGGGAGGGGCCCGGCCGCGCCCCCGTCCGCCTGCACTGGGGCGACAG
GGGGGCTCTAGAGAGCGCGCTGGCGGGAGCGTACGAGGCGTGGAGTCCGG
GCTGTCGTGGGGCGGAAGGCTCGGCACTGGAGCTCTTCAACGTGGCGGAC
CTGGGACCCTGCCCCCGGGAGAGAGCGTTCTCGTACCAGTGGGACCGGGT
GCTGGGAGAGGACGGGTGGCCTCGGTCGCGACGGGGCGGGGAGATGGAGA
GAATGTGGGCGCTCGTCAAGTGA back to topCoding sequence (CDS) from alignment at CM002456.1:726079..727901- >rna918 ID=rna918|Name=rna918|organism=Nannochloropsis gaditana|type=CDS|length=3420bp|location=Sequence derived from alignment at CM002456.1:726079..727901- (Nannochloropsis gaditana)
CGGGACCCAAAGAGCCCCGTTCTCCTCAGCCGCCCCCGCCTCACACGCGC
CCTGATCGACCGCCTGCTCACGCTCCCCCCCCCCTTGGGCCCGCCCTCCC
TCGGTCCCTCCCCACTGTCGCCGCACCTGCGCTACTTCCGCCTCCTGGCC
GCCTACCTGGGCCCGCTGCCTCCGCACAGGCCCGGGGGTCTCCACCGGGA
GGGGCCCGGCCGCGCCCCCGTCCGCCTGCACTGGGGCGACAGGGGGGCTC
TAGAGAGCGCGCTGGCGGGAGCGTACGAGGCGTGGAGTCCGGGCTGTCGT
GGGGCGGAAGGCTCGGCACTGGAGCTCTTCAACGTGGCGGACCTGGGACC
CTGCCCCCGGGAGAGAGCGTTCTCGTACCAGTGGGACCGGGTGCTGGGAG
AGGACGGGTGGCCTCGGTCGCGACGGGGCGGGGAGATGGAGAGAATGTGG
GCGCTCGTCAAGTGAATGTCGTTACGAGAGCTGATATACTCTCAACAAGA
CGACGTTCATGGGAGCGACTGTCCTTCAACCGAGGAACAACAGCCGATAC
ATGCACCACAAGGCTTAGAGGTCGCGAATGGCCTCCTGGAGGCCGCCATG
TGGCGGCAGAGGTCAAGAGACACGCCGAGATCCTGCCGATGGCGGGGCCT
CCGACCAAGCAGGCGGGCGCCCTTGTATCACTGGCCTACGTCCATACTCC
CAGACTGCCAAGACAAACCCGTCCTCTTGCACACGGTACTACTTCAGAGA
CTGCTGACCTTGTTTGTGGCAGCACGCGATGTGGCAGCCGTTGCAACCAC
CCTCGGCCTCTTGCATGCGCTGCAGCCCCGCCTGGAGGACACTAGCTTTG
AGGGAAATCTATGGCTTTTGACCGAGCTGGCAGCGCGTGAAGCTGGTGAC
ACTCCATATTCTGGGAGGGATGACACCAATGACGCGGAGGCCGGGGCGAG
GAGGCGACTTCCTTCTGCACAAGGTCCTCGCGCCCGCCGGCTCCTTCTCT
TTCTCCGCACCATGATGAGCGCCCGCATCCAGCTCCCAGAGGCAGCGGAC
GTTGAGAATGGACATAAAACCATAGCGCCGCCGAACACTTTGCGGATCCT
GGCGCTGGCCAAGCTCGTAAACTTCCTGGTGGAAGGTGGGCGTCTCTCCG
AGGCGAGGGAGGCCTTGCAACAAGAGTCCTTCTTGCGTCCCTTCGCCGCC
AGCCCGTACCTGCGCTCGATGAAAGCCTTGTTTGCCTGTCTGGAAGCAGG
CCTTTCGGACGGCGGCGGGGGGGACGGAGGGCGGGGCAGGAGGTTCTTCA
ACGACCTTGCCGCCGCCCCAAGTCGATGCTTTGCGCCAGGCCCGCCGCAG
CGAGGCAGCCCGGCGTCTCTCCGATGGGCTCAAGCGGCTCTGGAGGAAAT
CCTCCGCGCTATGGACGCAGGAAAAGACCTACAGAGTGGCCTTCTCGCAA
CCTCCTTGGCCATGCTCCGTATGGGGGGGGGGCAGAGGCGGAGGGAGCGG
GTTTGCAACCTCGTTCTCGCCCGCTGTCAGCGCCACCCGGACTCTCCTCG
CGCCCAGGAAATTGCCCACTCCGCCTCGCTGCTCGCGCGCGGGCAGGACC
ACAAGGCCACGCTCAGGCATTTGAAGCGGTGGCAGGCCCTCGACCCCTCC
TCCGACCGAGCCCTGGCCGGCCTCCTGCATGCCTACCGGCGCCAGCTCCT
CCGCTCCTATCGGGACCCAAAGAGCCCCGTTCTCCTCAGCCGCCCCCGCC
TCACACGCGCCCTGATCGACCGCCTGCTCACGCTCCCCCCCCCCTTGGGC
CCGCCCTCCCTCGGTCCCTCCCCACTGTCGCCGCACCTGCGCTACTTCCG
CCTCCTGGCCGCCTACCTGGGCCCGCTGCCTCCGCACAGGCCCGGGGGTC
TCCACCGGGAGGGGCCCGGCCGCGCCCCCGTCCGCCTGCACTGGGGCGAC
AGGGGGGCTCTAGAGAGCGCGCTGGCGGGAGCGTACGAGGCGTGGAGTCC
GGGCTGTCGTGGGGCGGAAGGCTCGGCACTGGAGCTCTTCAACGTGGCGG
ACCTGGGACCCTGCCCCCGGGAGAGAGCGTTCTCGTACCAGTGGGACCGG
GTGCTGGGAGAGGACGGGTGGCCTCGGTCGCGACGGGGCGGGGAGATGGA
GAGAATGTGGGCGCTCGTCAAGTGAATGTCGTTACGAGAGCTGATATACT
CTCAACAAGACGACGTTCATGGGAGCGACTGTCCTTCAACCGAGGAACAA
CAGCCGATACATGCACCACAAGGCTTAGAGGTCGCGAATGGCCTCCTGGA
GGCCGCCATGTGGCGGCAGAGGTCAAGAGACACGCCGAGATCCTGCCGAT
GGCGGGGCCTCCGACCAAGCAGGCGGGCGCCCTTGTATCACTGGCCTACG
TCCATACTCCCAGACTGCCAAGACAAACCCGTCCTCTTGCACACGGTACT
ACTTCAGAGACTGCTGACCTTGTTTGTGGCAGCACGCGATGTGGCAGCCG
TTGCAACCACCCTCGGCCTCTTGCATGCGCTGCAGCCCCGCCTGGAGGAC
ACTAGCTTTGAGGGAAATCTATGGCTTTTGACCGAGCTGGCAGCGCGTGA
AGCTGGTGACACTCCATATTCTGGGAGGGATGACACCAATGACGCGGAGG
CCGGGGCGAGGAGGCGACTTCCTTCTGCACAAGGTCCTCGCGCCCGCCGG
CTCCTTCTCTTTCTCCGCACCATGATGAGCGCCCGCATCCAGCTCCCAGA
GGCAGCGGACGTTGAGAATGGACATAAAACCATAGCGCCGCCGAACACTT
TGCGGATCCTGGCGCTGGCCAAGCTCGTAAACTTCCTGGTGGAAGGTGGG
CGTCTCTCCGAGGCGAGGGAGGCCTTGCAACAAGAGTCCTTCTTGCGTCC
CTTCGCCGCCAGCCCGTACCTGCGCTCGATGAAAGCCTTGTTTGCCTGTC
TGGAAGCAGGCCTTTCGGACGGCGGCGGGGGGGACGGAGGGCGGGGCAGG
AGGTTCTTCAACGACCTTGCCGCCGCCCCAAGTCGATGCTTTGCGCCAGG
CCCGCCGCAGCGAGGCAGCCCGGCGTCTCTCCGATGGGCTCAAGCGGCTC
TGGAGGAAATCCTCCGCGCTATGGACGCAGGAAAAGACCTACAGAGTGGC
CTTCTCGCAACCTCCTTGGCCATGCTCCGTATGGGGGGGGGGCAGAGGCG
GAGGGAGCGGGTTTGCAACCTCGTTCTCGCCCGCTGTCAGCGCCACCCGG
ACTCTCCTCGCGCCCAGGAAATTGCCCACTCCGCCTCGCTGCTCGCGCGC
GGGCAGGACCACAAGGCCACGCTCAGGCATTTGAAGCGGTGGCAGGCCCT
CGACCCCTCCTCCGACCGAGCCCTGGCCGGCCTCCTGCATGCCTACCGGC
GCCAGCTCCTCCGCTCCTAT back to top
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