EWM29787.1, cds886 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM29787.1 vs. NCBI_GenBank
Match: gi|585112368|gb|EWM29787.1| (uridine phosphorylase [Nannochloropsis gaditana]) HSP 1 Score: 668.307 bits (1723), Expect = 0.000e+0 Identity = 328/328 (100.00%), Postives = 328/328 (100.00%), Query Frame = 0 Query: 1 MKIEENGVFSSHFKEGKDSDGTCVETQRNVYRDTNAVPRNFDSTTLHLGLKEGQIASRILTVGCPGRAGLIAKVLDKSSPIFSHTSPRGFTTYTGTFERTRVSIIAIGMGMPMMDFLVREARQLVSKPLLITRFGTCGALCPDVAVGSVVVASPGSVSVMRNPDAFLPLPTPSGTSADEIDPIATGGAPHVRPPYLVFAPQLADPVLTQALLGELKEQLGSEHVRRGMNVSACSFYSSQGRRDAFFDDRNEDLLDVLRERHPSLASMEMESFQLLALARASRESVRAAAASIVVANRPTGDVCDEARLAYLERAGGEAMVRALVRFED 328 MKIEENGVFSSHFKEGKDSDGTCVETQRNVYRDTNAVPRNFDSTTLHLGLKEGQIASRILTVGCPGRAGLIAKVLDKSSPIFSHTSPRGFTTYTGTFERTRVSIIAIGMGMPMMDFLVREARQLVSKPLLITRFGTCGALCPDVAVGSVVVASPGSVSVMRNPDAFLPLPTPSGTSADEIDPIATGGAPHVRPPYLVFAPQLADPVLTQALLGELKEQLGSEHVRRGMNVSACSFYSSQGRRDAFFDDRNEDLLDVLRERHPSLASMEMESFQLLALARASRESVRAAAASIVVANRPTGDVCDEARLAYLERAGGEAMVRALVRFED Sbjct: 1 MKIEENGVFSSHFKEGKDSDGTCVETQRNVYRDTNAVPRNFDSTTLHLGLKEGQIASRILTVGCPGRAGLIAKVLDKSSPIFSHTSPRGFTTYTGTFERTRVSIIAIGMGMPMMDFLVREARQLVSKPLLITRFGTCGALCPDVAVGSVVVASPGSVSVMRNPDAFLPLPTPSGTSADEIDPIATGGAPHVRPPYLVFAPQLADPVLTQALLGELKEQLGSEHVRRGMNVSACSFYSSQGRRDAFFDDRNEDLLDVLRERHPSLASMEMESFQLLALARASRESVRAAAASIVVANRPTGDVCDEARLAYLERAGGEAMVRALVRFED 328
BLAST of EWM29787.1 vs. NCBI_GenBank
Match: gi|675212325|ref|XP_008915047.1| (hypothetical protein PPTG_18901 [Phytophthora parasitica INRA-310] >gi|568004412|gb|ETL78736.1| hypothetical protein L917_20492 [Phytophthora parasitica] >gi|568084746|gb|ETM99668.1| hypothetical protein PPTG_18901 [Phytophthora parasitica INRA-310] >gi|570312479|gb|ETO60427.1| hypothetical protein F444_21368 [Phytophthora parasitica P1976] >gi|570966565|gb|ETP29684.1| hypothetical protein F442_21184 [Phytophthora parasitica P10297] >gi|970665671|gb|KUG02261.1| Purine nucleoside phosphorylase DeoD-type [Phytophthora nicotianae]) HSP 1 Score: 230.72 bits (587), Expect = 1.165e-70 Identity = 135/302 (44.70%), Postives = 184/302 (60.93%), Query Frame = 0 Query: 31 YRDTNAVPRNFDSTTLHLGLKEGQIASRILTVGCPGRAGLIAKVLDKSSPIFSHTSPRGFTTYTGTFERTRVSIIAIGMGMPMMDFLVREARQLVSKPLLITRFGTCGALCPDVAVGSVVVASPGSVSVMRNPDAFLPLPTPSGTSADEIDPIATGGAPHVRPPYLVFAPQLADPVLTQALLGELKEQL----------GSE--HVRRGMNVSACSFYSSQGRRDAFFDDRNEDLLDVLRERHPSLASMEMESFQLLALARASRESVRAAAASIVVANRPTGDVCDEARLAYLERAGGEAMV 320 Y+ TNA PR D + LHLG+K GQ+A+R+++VG GRA L+A++LD + S RGFTT+TG + +VSI+A GMG+P MDF+VRE R +V P+ I RFGTCGA+ +V GSVVV+ GSV V RNPDAF P T D+ Y V + P L+ AL+ + ++L G++ +V G+N +ACSFYSSQGR D+ FDDRNE L++ L + H L ++EME+F LL LA+ SR SV+A AA +VVANR +G V L LE G+ ++ Sbjct: 3 YQSTNANPRRSDGSVLHLGVKAGQVANRVVSVGSIGRARLLAELLDDGQ-FETIESARGFTTFTGKMKGVQVSIVATGMGVPNMDFVVRETRAVVEGPMNIIRFGTCGAVREEVTPGSVVVSGKGSVMVTRNPDAFFPDAT-----GDDY--------------YRVSRVMPSSPALSNALVAAMNDKLSALPAEPTIGGNDVLNVFDGLNATACSFYSSQGRLDSSFDDRNEQLVENLTKTHQDLYTVEMETFHLLDLAQRSRGSVQATAAVLVVANRLSGQVIASDLLKRLESLWGQVIL 284
BLAST of EWM29787.1 vs. NCBI_GenBank
Match: gi|566008805|gb|ETI31716.1| (hypothetical protein F443_21345 [Phytophthora parasitica P1569] >gi|567946294|gb|ETK72105.1| hypothetical protein L915_20747 [Phytophthora parasitica] >gi|567974948|gb|ETL25522.1| hypothetical protein L916_20630 [Phytophthora parasitica] >gi|568034336|gb|ETM32009.1| hypothetical protein L914_20500 [Phytophthora parasitica] >gi|570936258|gb|ETP01515.1| hypothetical protein F441_21243 [Phytophthora parasitica CJ01A1]) HSP 1 Score: 229.565 bits (584), Expect = 2.595e-70 Identity = 134/302 (44.37%), Postives = 184/302 (60.93%), Query Frame = 0 Query: 31 YRDTNAVPRNFDSTTLHLGLKEGQIASRILTVGCPGRAGLIAKVLDKSSPIFSHTSPRGFTTYTGTFERTRVSIIAIGMGMPMMDFLVREARQLVSKPLLITRFGTCGALCPDVAVGSVVVASPGSVSVMRNPDAFLPLPTPSGTSADEIDPIATGGAPHVRPPYLVFAPQLADPVLTQALLGELKEQL----------GSE--HVRRGMNVSACSFYSSQGRRDAFFDDRNEDLLDVLRERHPSLASMEMESFQLLALARASRESVRAAAASIVVANRPTGDVCDEARLAYLERAGGEAMV 320 Y+ TNA PR D + LHLG+K GQ+A+R+++VG GRA L+A++LD + S RGFTT+TG + +VSI+A GMG+P MDF+VRE R +V P+ I RFGTCGA+ +V GSVVV+ GSV V RNPDAF P T D+ Y V + P L+ AL+ + ++L G++ +V G+N +ACSFY+SQGR D+ FDDRNE L++ L + H L ++EME+F LL LA+ SR SV+A AA +VVANR +G V L LE G+ ++ Sbjct: 3 YQSTNANPRRSDGSVLHLGVKAGQVANRVVSVGSIGRARLLAELLDDGQ-FETIESARGFTTFTGKMKGVQVSIVATGMGVPNMDFVVRETRAVVEGPMNIIRFGTCGAVREEVTPGSVVVSGKGSVMVTRNPDAFFPDAT-----GDDY--------------YRVSRVMPSSPALSNALVAAMNDKLSALPAEPTIGGNDVLNVFDGLNATACSFYTSQGRLDSSFDDRNEQLVENLTKTHQDLYTVEMETFHLLDLAQRSRGSVQATAAVLVVANRLSGQVIASDLLKRLESLWGQVIL 284
BLAST of EWM29787.1 vs. NCBI_GenBank
Match: gi|551601719|ref|XP_005782477.1| (hypothetical protein EMIHUDRAFT_63935 [Emiliania huxleyi CCMP1516] >gi|485635366|gb|EOD30048.1| hypothetical protein EMIHUDRAFT_63935 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 221.861 bits (564), Expect = 2.239e-67 Identity = 131/296 (44.26%), Postives = 170/296 (57.43%), Query Frame = 0 Query: 31 YRDTNAVPRNFDSTTLHLGLKEGQIASRILTVGCPGRAGLIAKVLDKSSPIFSHTSPRGFTTYTGTFERTRVSIIAIGMGMPMMDFLVREARQLVSKPLLITRFGTCGALCPDVAVGSVVVASPGSVSVMRNPDAFLPLPTPSGTSADEIDPIATGGAPHVRPPYLVFAPQLADPVLTQALLGELKEQLGSEHVRRGMNVSACSFYSSQGRRDAFFDDRNEDLLDVLRERHPSLASMEMESFQLLALARASRESVRAAAASIVVANRPTGDVCDEARLAYLERAGGEAMVRALVRF 326 Y DTN VP++ D HLGL+ G++A R+++VG RA + ++D S S TSPRGFTTYTGT VS++A GMG PMMDF VREARQ+V P++ R G+CG L P+ G+VV+ +PGSV V RNPDAF GG P Y + P DP L + L+ LG + V G+N SA SFY++QGR D FDDRN ++ + +HP SMEMESF LL LA S ++RA A+IV ANR + V L ER GG A++ A+ F Sbjct: 6 YSDTNGVPKDGDGRVTHLGLRAGELAPRVVSVGSLSRAQRLRDLMDSVS--LSLTSPRGFTTYTGTVAGVAVSVVATGMGAPMMDFCVREARQIVDGPMVFVRLGSCGGLSPEATPGTVVLNTPGSVYVSRNPDAF------------------AGGEGGSTPAYTIARPVAPDPRLCAHVCVALRAALG-DRVVEGLNASADSFYAAQGRCDEHFDDRNSTVVPEVLAKHPDACSMEMESFALLHLAACSLGTIRACTAAIVAANRHSAAVITTELLHETERVGGRAVLNAVASF 280
BLAST of EWM29787.1 vs. NCBI_GenBank
Match: gi|1129185987|gb|OLP92234.1| (Purine nucleoside phosphorylase [Symbiodinium microadriaticum]) HSP 1 Score: 218.009 bits (554), Expect = 5.060e-64 Identity = 138/312 (44.23%), Postives = 183/312 (58.65%), Query Frame = 0 Query: 20 DGTCVETQRNVYRDTNAVPRNFDS-TTLHLGLKEGQIASRILTVGCPGRAGLIAKVLD-KSSPIFSHTSPRGFTTYTGTFERTRVSIIAIGMGMPMMDFLVREARQLVSKPLLITRFGTCGALCPDVAVGSVVVASPGSVSVMRNPDAFLPLPTPSGTSADEIDPIATGGAPHVRPPYLVFAPQLADPVLTQALLGELKEQLGSEHVRRGMNVSACSFYSSQGRRDAFFDDRNEDLLDVLRERHPSLASMEMESFQLLALARAS--RESVRAAAASIVVANRPTGDVCDEARLAYLERAGGEAMVRALVRFE 327 D ++VY DTN VPR+ D LHLGL +G+IA+R++ VG RA L++ L + S +F S RGF YTG + R+SI++IGMG+ MMDF VREAR +V P+ I R GTCG L V VG V VAS GS V RN F P + E PYL+ + D LT + L+E LG++ V G+N++A SFYSSQGR D F D N L++ + +R+P +MEMESFQL LAR+S + S++AAAA + VANRPTGDV D L ER GG A+++AL + + Sbjct: 139 DSQAFVQSKSVYADTNGVPRSGDPPRVLHLGLTDGEIANRVVVVGHHSRAELLSSFLSPEGSEVFKLASDRGFLAYTGLYNDQRLSIVSIGMGLSMMDFFVREARAIVQGPMAIVRLGTCGCLQEWVKVGCVSVASAGSALVQRNYSHF---DAPKAHAGSE--------------PYLISDLCMPDAELTALVASSLQEALGAQKVVEGINITADSFYSSQGRADPAFTDENSVLIEKVLQRYPKAITMEMESFQLFHLARSSLPKGSIKAAAAVVNVANRPTGDVVDGEALRCAERDGGRALLQALSKLK 433
BLAST of EWM29787.1 vs. NCBI_GenBank
Match: gi|298709007|emb|CBJ30958.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 213.386 bits (542), Expect = 1.841e-63 Identity = 142/335 (42.39%), Postives = 181/335 (54.03%), Query Frame = 0 Query: 35 NAVPRNFDSTTLHLGLKEGQIASRILTVGCPGRAGLIAKVLD------------------------------KSSPIFSHTSPRGFTTYTGTFERTRVSIIAIGMGMPMMDFLVREARQLVSKPLLITRFGTCGALCPDVAVGSVVVASPGSVSVMRNPDAFLPLPTPSGTSADEIDPIATGGAPHVRPPYLVFAPQLADPVLTQALLGELKEQLGSEH----------VRRGMNVSACSFYSSQGRRDAFFDDRNEDLLDVLRERHPSLASMEMESFQLLALARASRES-VRAAAASIVVANRPTGDVCDEARLAYLERAGGEAMVRALVRFED 328 NAVP D LHL L+ G++A+ I+TVG GR ++A +LD ++ + S RGF T+TGT+ VSI+ I MG P MDF VRE R + + PL I R G+C L PD+ VGSV VAS GSV + +NPDA+ GT+A T G PYL AD L++ALL ELK L + V +N SA SFYSSQGR D F+DRN D+L L ERHPS S EME+FQLL LAR R+S V+A+AA+IV+ANR D R++ +ERA GEA +RA+ F D Sbjct: 12 NAVPLTADGRVLHLELRSGEVANNIVTVGSEGRGEILASLLDGTTTTAAGTPKDDNNDNINDHDNNTKNGSSSTTTTTTRRSKRGFVTHTGTYNGVPVSIVLINMGYPNMDFFVREVRAVTTGPLRIVRLGSCAGLRPDLPVGSVAVASEGSVMIRQNPDAW------EGTAARG----ETQG-----EPYLFHGVAPADEELSEALLKELKRSLDGKAGGSDGGGGTAVVGCLNASADSFYSSQGRLDPSFEDRNSDILSSLLERHPSAGSFEMETFQLLHLARLCRKSKVQASAATIVLANRIADDAIAIDRISRIERAAGEAALRAVTSFGD 331
BLAST of EWM29787.1 vs. NCBI_GenBank
Match: gi|1004139751|gb|KXZ47755.1| (hypothetical protein GPECTOR_33g637 [Gonium pectorale]) HSP 1 Score: 212.616 bits (540), Expect = 2.805e-62 Identity = 131/319 (41.07%), Postives = 174/319 (54.55%), Query Frame = 0 Query: 27 QRNVYRDTNAVPRNFDSTTLHLGLKEGQIASRILTVGCPGRAGLIAKVLD---KSSPIFSHTSPRGFTTYTGTFERTRVSIIAIGMGMPMMDFLVREARQLVSKPLLITRFGTCGALCPDVAVGSVVVASPGSVSVMRNPDAFLPLPTPS------GTSADEIDPIATGGAPHV-----------RPPYLVFAPQLADPVLTQALLGELKEQLGSEHVRRGMNVSACSFYSSQGRRDAFFDDRNEDLLDVLRERHPSLASMEMESFQLLALARASRESVRAAAASIVVANRPTGDVCDEARLAYLERAGGEAMVRALVR 325 + Y++ N P + + T HLG KEG++A RIL+VG GRA L++ +LD +F TS RGF T TG +E VSI++ MGMP MDF+VRE R +V + I R GTCGA+ +G +++AS GS+ + R+PD + L + S G H R PY V P ADP L L E +G+ V +G+N SA SFYSSQGR FDDRNE LL L HP L S+EME+FQLL LAR SR S++A + +A R + + ++L LE AGG A +R LVR Sbjct: 59 HKPTYKNAN-FPTDAEGRTYHLGTKEGEVAPRILSVGSVGRAQLLSTLLDPPAAGKTLFHRTSSRGFLTITGRYEGEPVSIVSTHMGMPNMDFVVRENRAVVRGQMAIIRLGTCGAVQRPAKLGDLLIASHGSIGIRRDPDYWTLLDSESSLEHTNGHKQSNGSGGNGSANGHANGHSGAAAAGGRKPYAVALPVPADPQLAALLSEEAARVVGAARVVQGLNASADSFYSSQGRTGTDFDDRNEGLLGELVAEHPDLVSLEMETFQLLDLARCSRGSIKAIGMCVALAERYSNAFLEYSKLEELEIAGGTAALRTLVR 376
BLAST of EWM29787.1 vs. NCBI_GenBank
Match: gi|1013937854|gb|KYQ91549.1| (uridine phosphorylase [Dictyostelium lacteum]) HSP 1 Score: 207.994 bits (528), Expect = 7.040e-62 Identity = 120/288 (41.67%), Postives = 169/288 (58.68%), Query Frame = 0 Query: 38 PRNFDSTTLHLGLKEGQIASRILTVGCPGRAGLIAKVLDKSSPIFSHTSPRGFTTYTGTFERTRVSIIAIGMGMPMMDFLVREARQLVSKPLLITRFGTCGALCPDVAVGSVVVASPGSVSVMRNPDAFLPLPTPSGTSADEIDPIATGGAPHVRPPYLVFAPQLADPVLTQALLGELKEQLGSEHVRRGMNVSACSFYSSQGRRDAFFDDRNEDLLDVLRERHPSLASMEMESFQLLALARASRESVRAAAASIVVANRPTGDVCDEARLAYLERAGGEAMVRALVR 325 P + T HLG K+ ++A R+LTVG RA ++K+LD I RGF TYTG ++ +SI++IGMG+PMMDFLVRE R +V+ P+ + R+GTCG++ +V VGS+ +A SV + RNPD + P PS S PY + P +DP L + L E Q G E + G N SA SFYSSQGR D FDD+N+ L+D L + H ++ ++EME+FQL LA S ++AAAA+I++ANR + D LE +GG+A + AL + Sbjct: 18 PVDASGTVYHLGCKKEELAQRVLTVGDYERAEKLSKLLDTDVKI-EIRKHRGFVTYTGAYKGVPMSIVSIGMGIPMMDFLVREGRYVVNGPMAVIRYGTCGSVT-NVPVGSLAIAK-DSVLIRRNPDYWHP-SKPSNIS-----------------PYDISLPCESDPELFENLRSEFVSQYGEERIVTGTNASADSFYSSQGRIDPNFDDQNDKLIDQLIQTHKNIKTLEMETFQLYHLATRSVAPIKAAAATIILANRLSNDFLSNEEKTKLEISGGKACLEALYK 284
BLAST of EWM29787.1 vs. NCBI_GenBank
Match: gi|470491711|ref|XP_004345923.1| (hypothetical protein ACA1_183130 [Acanthamoeba castellanii str. Neff] >gi|440800340|gb|ELR21379.1| hypothetical protein ACA1_183130 [Acanthamoeba castellanii str. Neff]) HSP 1 Score: 207.223 bits (526), Expect = 3.518e-61 Identity = 117/289 (40.48%), Postives = 167/289 (57.79%), Query Frame = 0 Query: 38 PRNFDSTTLHLGLKEGQIASRILTVGCPGRAGLIAKVLDKSSPIFSHTSPRGFTTYTGTFERTRVSIIAIGMGMPMMDFLVREARQLVSKPLLITRFGTCGALCPDVAVGSVVVASPGSVSVMRNPDAFLPLPTPSGTSADEIDPIATGGAPHVRPPYLVFAPQLADPVLTQALLGELKEQLGSEHVRRGMNVSACSFYSSQGRRDAFFDDRNEDLLDVLRERHPSLASMEMESFQLLALARASRESVRAAAASIVVANRPTGDVCDEARLAYLERAGGEAMVRALVRF 326 P + + HLG+K G++A+RIL+VG GRA L+A D S F+ S RGF +TG + ++IIA GMG+PM+DF+VRE R +V P++I RFGTCG D+ +GS+ VAS GS+ R DAFL + GA Y + AD L++ + +L++ + E + RG+N++ SFYSSQGR F+D NE LLD + E HP +AS+EME+F L R ++ A+AA+IV+A R +G D A LER GG A++ AL + Sbjct: 37 PMDAEGRVYHLGVKAGEVANRILSVGDSGRAALLATFFDDPSKTFTRASTRGFVIHTGRRKGVPMTIIATGMGIPMIDFVVRECRAIVEGPMVIARFGTCGTPQTDIPIGSICVASKGSICATRKYDAFL-------------ESAQKEGARKALDYYALSTIFPADATLSELITAKLEKSVRPEIIHRGLNITGDSFYSSQGRVTTHFEDYNETLLDEVLEIHPDVASLEMETFHL-------RGTITASAATIVLAQRRSGAFLDHATTRQLERDGGCAVLDALAEY 305
BLAST of EWM29787.1 vs. NCBI_GenBank
Match: gi|575487160|ref|XP_006682874.1| (hypothetical protein BATDEDRAFT_37549 [Batrachochytrium dendrobatidis JAM81] >gi|328766438|gb|EGF76492.1| hypothetical protein BATDEDRAFT_37549 [Batrachochytrium dendrobatidis JAM81]) HSP 1 Score: 206.068 bits (523), Expect = 4.099e-61 Identity = 124/292 (42.47%), Postives = 178/292 (60.96%), Query Frame = 0 Query: 38 PRNFDSTTLHLGLKEGQIASRILTVGCPGRAGLIAKVLDKSSPIFSHTSPRGFTTYTGTFERTRVSIIAIGMGMPMMDFLVREARQLVSKPLLITRFGTCGALCPDVAVGSVVVASPGSVSVMRNPDAFLPLPTPSGTSADEIDPIATGGAPHVRPPYLVFAPQLADPVLTQALLGELKEQLGSEHVRRGMNVSACSFYSSQGRRDAFFDDRNEDLLDVLRERHPSLASMEMESFQLLALARAS-----RESVRAAAASIVVANRPTGDVCDEARLAYLERAGGEAMVRALV 324 P + + T H+G+K ++A+RI+TVG P RA IA+ LD S +F H S RGFTT TGT++ T VS+IAIGMG PM D +VRE R++VS P+++ RFG+CG + + VG + VA G+V+V RN D F P+ SGT+ + A PYLV +D L++ L L + LG + V G+N +A SFYSSQGR+D F+D N DL+D +R+++P+ ++EMES LL LAR + + S+RA A ++V A+R T + LE A++ ALV Sbjct: 7 PVDNEGRTYHVGVKHNEVANRIITVGDPKRAYKIAEHLD--STVFKHESKRGFTTITGTYKGTPVSLIAIGMGTPMADMMVREVREVVSGPIIMIRFGSCGGIGENSRVGLMAVAKDGAVNVCRNYDYFAPM--YSGTAPE---------ATSTEGPYLVSKICPSDVQLSELLYSSLSDCLGKDAVITGLNATADSFYSSQGRQDPGFNDHNSDLIDTIRKKYPNCETLEMESHMLLHLARCATFHTPQASIRATACAMVFADRKTNAFIAPETVHELEAKASRAILDALV 285 The following BLAST results are available for this feature:
BLAST of EWM29787.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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