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Properties
| Property Name | Value |
|---|
| Product | putative peroxisomal protein pox18 |
| Orig transcript id | gnl|cribi|Naga_100017g80.297.mrna |
| Orig protein id | gnl|cribi|Naga_100017g80.297 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002456.1 | supercontig | CM002456.1:644650..646451 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna885 ID=rna885|Name=rna885|organism=Nannochloropsis gaditana|type=mRNA|length=5023bp
AGTGCTAAAGGATGATTATGGTCGACTTCCTCATAGGATAAGCATGTGTA
TAGACTTTCAAGGTTTCGCCTGTGAAACAGGACGCATGCGTGGAATGGAA
ACAGGCAAGAGGCCGAGCGCCTTGCTGCAGCCTCGCCGCTTTCACTGTCA
ACCCAAACTCACCATTTCACCCTGACTAATGACTGTGTGACGTGCAGAAG
TAGGGGGCGACGCCTTCCTGCTGACTTTTGGGGTGAGAAGACACTGGAGG
CCTGGGCGGTTGATCTGACAACAGCGCAGAGGCCCATCGGCCCCGTTGTA
TTCCGCAATGGAAGAATCGTGGCAGATTTTGTCGGCCTCGACACTTCTTA
AACCAGACGGTGGGGGGCGATGGCGCCGTCTAACGAGGTTTGAAGCGGAG
CAACGCATGCCCGTGGAGGTGCACATCTCGGAACGCACCGGTCTGCGGGT
GATGCTAGCGCGGGTGGCGGGTCCGCTAGTGACGTGTTTGGTGTGCGTGG
CTACGGAGGCTGTGGACCACTTGCCTCACTGGCGGCAAGACGACGGCCTA
ATGCACGCCTTGGAGCACATGGTGCTTGCAGGGAGCGACGCTTTTCCCCA
CAAGGGAGCGCTGGAGGAGGAAACTCTGAACGCGGCCTTTTCCCGAGCAT
CTCCTGCTCCGTCCACTGTCCCTGTAGCCCCGTCTACTGCCTGTTCCGCC
CCTCCAGGCTCCGTGGCGGCCCCTGCCGACAGCCTCCCGTTCCTCTTCCC
CCCCGGGGGGCCGGTCAAGGCCCTGCACCAGGTGGATTATACAGGGTACA
CGCTCACAACGGCGGGGCCCGCAGCCTTCCTCGCTCTGCTTCCTGTGCTC
CTGGACCACGTCTGCTTCCCTCTCCTCAGCGAAGCCGCCCTGACTACCCA
AGTGCGGCACGTGGACGGGCGCGGTCGAGACGGCGGGGCCGTCTACGAGG
AGATGCTTGCGGCCGAGTTGATGGGGGAGGAGGGAGGGGAAAGCTCGCCC
CGGCAACGCTTGCTGGAGGCGCTTTACCCGGAGGGTTGCGGGTACCGCGC
CGTGACTGGAGGGCGCTGTAGCCACCTTCGTATGCTTTCGCGGGAGGCGG
TGCGGGCCTACCACGCCGAGTACTACCGACCAGAGAACATGGCCGTGATT
GTGACCGGCCCAGTGGAGACGGCGGAGCTCTTGGCCGGCCTGGAGGGCGT
CGAGGCCAAACTGCTGGGCGCCGGCCGAGGGAGAGAGGCTGGCCCGTTGT
CGGGCGGCTTGCGGGGTCAGGAAGGGGGCGCGGGGGCCGCGAGGCGGTCT
TATGCCGGCCTTGCGTCGACCGGCGACTCTGCATCCGGCCTGAAGGTTGC
CAAGCGCCCCTGGCACCACATCCAGACGATCGCTTTGGATGTGGTGGGTA
AGGGCGAAAGCGGTCCTCGATTTGAGCGCGTCACGCACCCATGCTCGGCC
CTCCCACCCGCATCCCCGACCGCGCTCTCGTCTGGACTGCGCAACCTGCC
TTATCACGAGCAGACGCAGCCGCGCTCCCAGGGAGAGGAGTGGGGCGCCC
GCCAGAGCCAGCAAGAGGGGCAGGTTCTGCTTGGATGGCTTGGCCCATTT
TGGGGGGACTTCGAGGCCAACTTGAGCATTCGCATCCTGTGGCTGTACCT
CCTGGAGGGCCCCACCGCGCCCTTGCGCACGGCCCTGGTCGGTGAACAAG
GGCTGTGTCGTGAGGTGACGTTCGCGGTGCAAGAAGGGAGACCTGGCTCG
CACTTCCTGCAGTGTGATGGCGTGGCACTGTCAGCCATGGAAAGGGTGTA
TCCCGCCTTCATCGAGGCGGCGATGGCCATAGCTGGCGGGACGGAGGAGG
AAGGGGGGGAAGAAGAAGCAGAGGAAACCCATGTTGACATGGGCCGCGTA
CGCGCACTGATACACCGGGAACGAGTGCGATATTTGCAGGACATGGAAGA
AGATACGCATGCCAGCCTGACGTCGCTCTTGCTTTACACGTTCCTGTACG
GAAAGCGTGCAGGAGAAGCGAAGGAGGGGGAGCATGCAACGGCCGCGGTA
GGAAGGAGTCCATCATTGGTGAGCGAGGCGGAGGAAGCAGCACAGATAAA
GGATCATGTGCAGAACACGATTTCGCGCTTAGAGGCACTACCCTGCCGCG
AAGGGAGCGCGGAGGACACACGGTATTGGCGGTCACTGATTCGGCGAGTC
TTGTTGGACGCGAGGAAGACGGTCGTAGTGCTGGCACGGTCTAGCAGCAG
CCTGGCCCAGGCGAGAAAAGAATCAGATGAGCAGCGACAAGAGGAGCAAG
CCCGCCGCTTGGGTCCAGCAGAGCTCTCACAAAGAGCTCGGGAGCTCGAG
TCGGCAGAGGAGGAGATGGCACGCCCCTGCCCTCCTCATCTTGCCGAAAT
GCTGCTCACATACGCGTCCACACTTATGCCGGAAAGAAATCAAAAAATGG
GGGGCGACTGGGGAAACAACCTGCCCACCGTGACCCTGTGCACGGTGCGA
AATGTAGTGACTCCATCAGGCAAGATCAAATTTGAGGTTTTTGACTCGGT
CGAAACGGTAGGGAGGGAGAATACGGAAACGCAAAGGCTGCCATCACAGG
ACTTTGTGGCGAAGGGAGTCGACGGGGTGTCCGCCAGAGCTGTGGAGGTG
GCGAAAGCTTTGCACTCAGATGGGTTGGGGTCGGAGACCTGTGAGTCCCC
GGGGCCCAATGACCGCCTGCCCTTCTTTCTGCAGTGGGACCACCTGGGAG
GGACAGACTTTGTGACAGTGACAGCGTGGCTTGAAACCTCGGCCCTGCCA
GATCACCTCCGACCGCTTTTGGAGCTTTGGTTGGAAGTTCTTTTCGAGCT
CCCCGTGCGCCAAGAGGATGGGTCCCTCTGGACATCGGAGGAAGTGACGC
GGTACCTGCAGGCTGACACAGTATCGGCAAGCAGTGCCCTAGGGACAGGG
CGTTCGAATTTTTACGCGGGAATTTGGTCGCAGGCTGCCTCCATCAGTCT
AAAAGTGGAGGCTGAGAAGTATTGGTTGGCCGTAAGATGGCTCCGCAATC
TGCTGTACAGGACAGAACTCTGCCCAGACCGTATCGCCAGCGCGGCCGGG
AAGCTCTTGGCAGACATAGAAGGCTATCAGCGGGATGGGATGTCCATCTG
CTCGGGGCTCATGAGAGGATTGAATTTTGATGCTGCACGGAGCAACCATG
CGGCTACCTCCTTCGTCAGACAGTACGGTGTTTTGACAGCCGTCATGCAG
CGACTTGGAACTCAACCCACAGGTCTTTTGACGGATCTCGCAGCGTTACA
AGAAACCCTCACGCAGGCATGGAACCTGCGTATCCATGTCGTGTGTGACG
TTCTGGCCCAGCCAGAGCCGGTCCGTCCGTGGCTGCGCGATTTTCTACCC
CTATCCCAGGCACGTTATGCGGTCAAGGCGTTGCATATCGCCTACACGGA
CAGCGAAAGCGGAAGACAGAAGCAAGAGCAGCGAGATGAAAGAAAAATCC
CTCCATGTGGCGTGTTCGGGTCCCCTAATTCGGACGCGGCTACGCGAGAA
TCAGATGATGTCACCCTTCCTCCGCTCTCAGTCACCCTATCAAGTGTATT
CTGTCCCGTGCTGCAATCGCGTCATCTTCGCACAGCTGAATGCCTCAATC
CAAGCGGGAAGGGACTTTTGATCTCATCTCCAGCCATCGATGCCGGCTAT
CTCGTGCAATGCGCCCCTTTTGATCCGATTGGGGATGGCCTCTCTTACGG
AAGTGCAGGGTATGCAGCATTGTTGGTTGCAATGGAGTACCTAACACGAC
ATGCCCCACTGCAACACTGTCAGGCTTCGCATGTGACAGTAGCTTCTCGG
GGACATGCTGTCGAGACAAGGGCGGATGCGGCACCGAGTACATCACCTGG
CACAGGGTTGAATGTCGAAGTCGACGGAGCGTCAACAGGAGCTGCGGCAG
GTACTTCTCTTCGAAGCATTCATCCGTGCAGCTATGAACTGACCTGCTCA
CCTGAGCAAGGCATTTTGACCCTGTCCTTTTATCGAGCCCTCAATCTGAC
TGCTGCTTACTCTGAGGCGCAAGATGTTGTGCGATCTTACGCAGGAGGTA
GCCTTGAGGTCGATACACGTGCGCTAGCTAGGGCAAAAAGTGCCGTTTTA
TTCGAGTATTTAGACCGCATCTGGACTCGTCCTGCCGCAGCGCAACAAAG
CTTCTTGAATTACTTCCGAGGAACGCGGCCTTGGTTTTGCACGGAGACGA
TGGCGGCTGTCCAAAACGTGTCGGCACCGGAAGTGGTTCGTGCTATTCGA
CGACACATTTTGCGAATTTTCGATGTAACTCGGACTTCGATGGTGGCGGC
ATGTCCATCCTCACAAGCTTTAGCCCTGAAATTTGACCTGGTGCGAAAAT
TGGGACGACCGGTGGTAGAGAGCGAGACCATCGAGCTGTGCTTGGCTCGC
ATGGCAGCGGACGAGGAAGCCATGTCAGAGATTGAAGGCAGCACGAGCGA
CTCGGACGCATCACTTGCACAGGACTTGTCGGAAAGGGGAAACATTGGAG
GAGTTGGAGGGAGCGTCAGGAGCGTAAAGGGATGGGTGGGCGAGGTTGTT
ATGAGACGGCAGGACGGGTTGTTTTTCGCTGCGGCGATGGCAGGAGTTGC
GATCGTGCTTGCGAAAAAGAGCTAGTAGTACCATGTGCGCACCGGCTGAG
GGGAAATAGGACATTATAACGAATGCGGCGAGTCAAAATTTGTGAAAAGC
CGTCGAGGCCATATTGAAGCCTCATGGCTGGTCAAAAAGGACGGGAGAAG
CTGACATGGAGGTAAGGTTTGGCGTCAGAGAGATGAAATTTTTCGTTTGT
ATAGGAACGGCATGATGCAAATGAAAATTCTTCTTTATGTGTATACGTGT
AAAAAAGGGTTTATGAGTTGAAAGGAATTTTAGTGTCCAAAAATGTGCAA
TCTGTGTTTAGAAACTCCTAAGGAATAAAAGGAGAAGAAAATCGTTTGTA
CAGGCCATTAATTGGTTCACTCT back to topprotein sequence of rna885 >rna885-protein ID=rna885-protein|Name=rna885|organism=Nannochloropsis gaditana|type=polypeptide|length=245bp
MPRAPEIFEEMSEAVEEIGPSLKKKFSGIVRFEITNTGTWTLDLKTGNGA
VTTGEGSVKPDLVIKVADDDFASLYEGKCNAQQAFMKGKLKVKGNMSLAM
KFNQVLTATRKQLEKTKKKKTAGAVAAAVSTSAAPKAQVVFDQLAEVLPT
KGAALVAKMKGVIQWDINGEKWLLDLKNGTGSLSKGTGPADLTVTMADDV
FFQVSQGKLSAQQAFMKGQIKIKGNMGMATKLGPILTAARPTARL back to topmRNA from alignment at CM002456.1:644650..646451- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna885 ID=rna885|Name=rna885|organism=Nannochloropsis gaditana|type=mRNA|length=1802bp|location=Sequence derived from alignment at CM002456.1:644650..646451- (Nannochloropsis gaditana)
TCCCCGACTCCTGTGCCCGCCCTGGCACGCCAGCGCACAATCTGTCATTC
ACTGACCTGGATGCACACAATGGAAATGTGAAGGGAATAAGGAGCTGTGC
TTGGCTGAGGCTGTGCCGATACTTTCTGTCTTTTGTCTCCCGGGCAAGTG
CTCACTTTTTCTTCTTCAACTCACCTCGCGTCAAATACCCATCCACAGCT
TGCGCTGCTTTCAAGCACAAAGCAAATTAAGCTCCCGCCTCCCTCCTGGA
AGCTTCCGATAGCCAGCAACTATGCCTCGTGCACCTGAAATTTTTGAAGA
AATGAGTAAGTAGGAGATGACTATACATGCTTTCTAATGCACAAGTATCC
TGTTTCTTTGTCCCAATCCTTTCGATGGCCTCGTCTTAAAAAAATTGACA
AAGTAAATCATTCGCGAATATTTTCTGACTCATTATGCCGTGAAAGGAAC
GACGAAAGAGGAGTATGGGCGCCTGATGTACTTACCCATGATGGGATCGG
ATACTTTTCTCCGTCGGCAACAGGGTCAGGCACCTCTTTTCTGACGTTAC
CCCCCCAAACTTGTCTTGATCACACAGGCGAGGCAGTCGAGGAGATCGGA
CCCTCGCTGAAGAAGAAGTTCTCCGGAATTGTTCGTTTTGAGATCACCAA
CACAGGCACATGGACGTTGGATCTGAAAACCGGAAACGGCGCGGTCACCA
CGGGAGAAGGGAGCGTGAAGCCCGATTTGGTGATCAAGGTAGCAGACGAC
GATTTCGCGTCCCTGTACGAGGGAAAATGCAATGCTCAGCAAGCCTTCAT
GAAGGGCAAGCTCAAGGTCAAAGGGAACATGTCTTTGGCTATGAAGTTCA
ATCAGGTCCTAACCGCCACTCGCAAGCAGCTCGAGAAAACCAAGAAAAAG
AAGACAGCTGGCGCGGTGGCAGCGGCGGTGTCTACCTCTGCGGCACCGAA
AGCGCAGGTGGTGTTTGACCAGCTTGCAGAAGTACTACCCACCAAAGGCG
CGGCGCTGGTAGCGAAAATGAAGGGCGTCATCCAGTGGGACATCAACGGG
GAAAAATGGCTTTTGGATCTTAAGAATGGAACGGGAAGTTTGAGCAAAGG
CACGGGACCCGCAGACTTGACGGTCACGATGGCTGATGATGTCTTTTTCC
AGGTATCGCAGGGGAAACTGAGCGCGCAGCAGGCTTTTATGAAGGGTCAG
ATAAAGATCAAGGGGAACATGGGCATGGCCACCAAGCTAGGACCGATTCT
GACCGCGGCCCGTCCGACGGCACGACTTTAAAGCACAAAGGATCGAAGTA
AAGCGGAAAATGAGACGATGGGAGCACGAATGGAGGGGCGCAGGCGCAAG
GGGTGTGTGTCTCTTACATATCACTTGCGTATGAGGGAGCAAGCTGTACT
ACCGTACCCGCTTGGCATGACGAATTTTGGAGCGCGGCACTGGGAGGGCG
TAGATCCCGTGACATCGCTTTTGAGACTGAAATCTTCTTCCTCTACTGTC
TAAGGGATGATACGAGGGAGGCATCTGCTGCGACCGAAACCAGTGAAGAA
GATCGCAAGGGACAAACGGGAACAGGAAAGCAATGGCCGCAAAACTGATC
AGACACAGAACCCCAACCAAGTTTTAGGCAGTGGGATACAAGAGTGAACC
AATTAATGGCCTGTACAAACGATTTTCTTCTCCTTTTATTCCTTAGGAGT
TTCTAAACACAGATTGCACATTTTTGGACACTAAAATTCCTTTCAACTCA
TAAACCCTTTTTTACACGTATACACATAAAGAAGAATTTTCATTTGCATC
AT back to topCoding sequence (CDS) from alignment at CM002456.1:644650..646451- >rna885 ID=rna885|Name=rna885|organism=Nannochloropsis gaditana|type=CDS|length=1476bp|location=Sequence derived from alignment at CM002456.1:644650..646451- (Nannochloropsis gaditana)
GCGAGGCAGTCGAGGAGATCGGACCCTCGCTGAAGAAGAAGTTCTCCGGA
ATTGTTCGTTTTGAGATCACCAACACAGGCACATGGACGTTGGATCTGAA
AACCGGAAACGGCGCGGTCACCACGGGAGAAGGGAGCGTGAAGCCCGATT
TGGTGATCAAGGTAGCAGACGACGATTTCGCGTCCCTGTACGAGGGAAAA
TGCAATGCTCAGCAAGCCTTCATGAAGGGCAAGCTCAAGGTCAAAGGGAA
CATGTCTTTGGCTATGAAGTTCAATCAGGTCCTAACCGCCACTCGCAAGC
AGCTCGAGAAAACCAAGAAAAAGAAGACAGCTGGCGCGGTGGCAGCGGCG
GTGTCTACCTCTGCGGCACCGAAAGCGCAGGTGGTGTTTGACCAGCTTGC
AGAAGTACTACCCACCAAAGGCGCGGCGCTGGTAGCGAAAATGAAGGGCG
TCATCCAGTGGGACATCAACGGGGAAAAATGGCTTTTGGATCTTAAGAAT
GGAACGGGAAGTTTGAGCAAAGGCACGGGACCCGCAGACTTGACGGTCAC
GATGGCTGATGATGTCTTTTTCCAGGTATCGCAGGGGAAACTGAGCGCGC
AGCAGGCTTTTATGAAGGGTCAGATAAAGATCAAGGGGAACATGGGCATG
GCCACCAAGCTAGGACCGATTCTGACCGCGGCCCGTCCGACGGCACGACT
TTAAATGCCTCGTGCACCTGAAATTTTTGAAGAAATGAGCGAGGCAGTCG
AGGAGATCGGACCCTCGCTGAAGAAGAAGTTCTCCGGAATTGTTCGTTTT
GAGATCACCAACACAGGCACATGGACGTTGGATCTGAAAACCGGAAACGG
CGCGGTCACCACGGGAGAAGGGAGCGTGAAGCCCGATTTGGTGATCAAGG
TAGCAGACGACGATTTCGCGTCCCTGTACGAGGGAAAATGCAATGCTCAG
CAAGCCTTCATGAAGGGCAAGCTCAAGGTCAAAGGGAACATGTCTTTGGC
TATGAAGTTCAATCAGGTCCTAACCGCCACTCGCAAGCAGCTCGAGAAAA
CCAAGAAAAAGAAGACAGCTGGCGCGGTGGCAGCGGCGGTGTCTACCTCT
GCGGCACCGAAAGCGCAGGTGGTGTTTGACCAGCTTGCAGAAGTACTACC
CACCAAAGGCGCGGCGCTGGTAGCGAAAATGAAGGGCGTCATCCAGTGGG
ACATCAACGGGGAAAAATGGCTTTTGGATCTTAAGAATGGAACGGGAAGT
TTGAGCAAAGGCACGGGACCCGCAGACTTGACGGTCACGATGGCTGATGA
TGTCTTTTTCCAGGTATCGCAGGGGAAACTGAGCGCGCAGCAGGCTTTTA
TGAAGGGTCAGATAAAGATCAAGGGGAACATGGGCATGGCCACCAAGCTA
GGACCGATTCTGACCGCGGCCCGTCCGACGGCACGACTTTAAATGCCTCG
TGCACCTGAAATTTTTGAAGAAATGA back to top
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