EWM29885.1, cds781 (CDS) Nannochloropsis gaditana

Overview
NameEWM29885.1
Unique Namecds781
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002456.1:400158..401702 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM29885.1
Productdna primase large subunit
Orig transcript idgnl|cribi|Naga_100035g42.3349.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002456.1supercontigCM002456.1:400158..401702 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0006259DNA metabolic process
GO:0009058biosynthetic process
GO:0006269DNA replication, synthesis of RNA primer
Vocabulary: Molecular Function
TermDefinition
GO:0016740transferase activity
GO:0003677DNA binding
GO:0016779nucleotidyltransferase activity
GO:0003896DNA primase activity
Vocabulary: INTERPRO
TermDefinition
IPR016558DNA_primase_lsu_euk
IPR007238DNA_primase_lsu_euk/arc
Homology
BLAST of EWM29885.1 vs. NCBI_GenBank
Match: gi|585112468|gb|EWM29885.1| (dna primase large subunit [Nannochloropsis gaditana])

HSP 1 Score: 1071.61 bits (2770), Expect = 0.000e+0
Identity = 514/514 (100.00%), Postives = 514/514 (100.00%), Query Frame = 0
Query:    1 MQTTTRAIHGEPTYTRVKREPTRLLSLYNTAPQAEITLEEFELYALDRLQILRSIESLRLRGMKGDEFRMKLEEIISACMPMTLGTAEEVRKDQISHFILRIAYCKTEDLRRWFLKHESELFRFRLERLDSNERAKFMEQSGLAYDVVSKEDVLRLKAQLQAVPIFSQQPGYGQGIHTVEVTRTQFFRIPFTQALDLVAHRQVFLEGGFAYVPVERLVSIIVARFRSSLSRGLLEAFGAMPYVLTDGRIAPLVSNMAKQYTGKDFSGTKTGDSLDLNDLDMLADRSMPMCMRVLHKNLRLEHKLKHWGRLQYGLFLKGAGIGMEDAIQFWEKEFTKIMTTDVFNKQYAYSIRHYFGKEGKRKDYTPFNCSKIILGPGPGHGEFHGCPFRHYDEANLNKLLERAGVGAMDRDEMIKLSKGQHYQLACMKHFETTHKGAESLISMDGVGNHPNAFFAASMAFYKEKNGEGGRRGGSPNPSSQTSASSAGPGEDAGDPASPHGESMEIGTGEGSPPA 514
            MQTTTRAIHGEPTYTRVKREPTRLLSLYNTAPQAEITLEEFELYALDRLQILRSIESLRLRGMKGDEFRMKLEEIISACMPMTLGTAEEVRKDQISHFILRIAYCKTEDLRRWFLKHESELFRFRLERLDSNERAKFMEQSGLAYDVVSKEDVLRLKAQLQAVPIFSQQPGYGQGIHTVEVTRTQFFRIPFTQALDLVAHRQVFLEGGFAYVPVERLVSIIVARFRSSLSRGLLEAFGAMPYVLTDGRIAPLVSNMAKQYTGKDFSGTKTGDSLDLNDLDMLADRSMPMCMRVLHKNLRLEHKLKHWGRLQYGLFLKGAGIGMEDAIQFWEKEFTKIMTTDVFNKQYAYSIRHYFGKEGKRKDYTPFNCSKIILGPGPGHGEFHGCPFRHYDEANLNKLLERAGVGAMDRDEMIKLSKGQHYQLACMKHFETTHKGAESLISMDGVGNHPNAFFAASMAFYKEKNGEGGRRGGSPNPSSQTSASSAGPGEDAGDPASPHGESMEIGTGEGSPPA
Sbjct:    1 MQTTTRAIHGEPTYTRVKREPTRLLSLYNTAPQAEITLEEFELYALDRLQILRSIESLRLRGMKGDEFRMKLEEIISACMPMTLGTAEEVRKDQISHFILRIAYCKTEDLRRWFLKHESELFRFRLERLDSNERAKFMEQSGLAYDVVSKEDVLRLKAQLQAVPIFSQQPGYGQGIHTVEVTRTQFFRIPFTQALDLVAHRQVFLEGGFAYVPVERLVSIIVARFRSSLSRGLLEAFGAMPYVLTDGRIAPLVSNMAKQYTGKDFSGTKTGDSLDLNDLDMLADRSMPMCMRVLHKNLRLEHKLKHWGRLQYGLFLKGAGIGMEDAIQFWEKEFTKIMTTDVFNKQYAYSIRHYFGKEGKRKDYTPFNCSKIILGPGPGHGEFHGCPFRHYDEANLNKLLERAGVGAMDRDEMIKLSKGQHYQLACMKHFETTHKGAESLISMDGVGNHPNAFFAASMAFYKEKNGEGGRRGGSPNPSSQTSASSAGPGEDAGDPASPHGESMEIGTGEGSPPA 514          
BLAST of EWM29885.1 vs. NCBI_GenBank
Match: gi|299471290|emb|CBN79116.1| (DNA primase [Ectocarpus siliculosus])

HSP 1 Score: 503.056 bits (1294), Expect = 2.041e-171
Identity = 253/505 (50.10%), Postives = 336/505 (66.53%), Query Frame = 0
Query:   20 EPTRLLSLYNTAPQAEITLEEFELYALDRLQILRSIESLRLRGMKGDEFRMKLEEIISACMPMTLGTAEEV----RKDQISHFILRIAYCKTEDLRRWFLKHESELFRFRLERLDSNERAKFMEQSGLAYDVVSKEDVLRLKAQLQAVPIFSQQPGYGQGIHTVEVTRTQFFRIPFTQALDLVAHRQVFLEGGFAYVPVERLVSIIVARFRSSLSRGLLEAFGAMPYVLTDGRIAPLVSNMAKQYTGKDFSGTKTGDSLDLND-----LDMLADRSMPMCMRVLHKNLRLEHKLKHWGRLQYGLFLKGAGIGMEDAIQFWEKEFTKIMTTDVFNKQYAYSIRHYFGKEGKRKDYTPFNCSKIILGPGPGHGEFHGCPFRHYDEANLNKLLERAGVGAMDRDEMIKLSKGQHYQLACMKHFETTHKGAE-SLISMDGVGNHPNAFFAASMAFYKEKNGEGGRRGGSPNPSSQTSASSAG----PGEDAGDPASPHGESMEIGTGEG 510
            E  + +S+YN AP  EITL+EFEL ALDRLQ+LR IE L+ R ++GD+FR  L E +   M ++    E      RKD ISHFILR+AYC++EDLRRWFL  E+ LFR RLE L   E +KF+ + GL ++VV+ E    L+++L ++P              +E  RT ++RIPF QA DL+  RQV+LEGGFAYVPV+R+V+I+VAR+R  +S+ L+EA     YV +D R  PL+ NM+KQY G+DF     GD  D ++     L+ LA+RSMP+CM+ LH  L  EHKLKHWGRLQYGLFLKGAG+ ++DA+ FW+  FTKIM  D F KQYAY++RH +GKEGKR +YTP++C KII+G  P  G+ HGCP+RHYDE +L+ LL +  +GA D+D +++  K ++YQLAC +HFE THKG E S +S DGVGNHPNA+  ASM F+KEK    G  G   +P+ +      G    P   A  PA+P       GTG+G
Sbjct:   22 ERHKAISMYNEAPFEEITLDEFELVALDRLQVLRKIEDLKARNVRGDDFRRALRESLHKYMKLSTLNEESASADKRKDTISHFILRLAYCRSEDLRRWFLTQETALFRHRLEELSPAEMSKFIPEHGLFFEVVTPERKAALRSKLLSIP----------AAPVMEFDRTTYYRIPFWQASDLIGKRQVYLEGGFAYVPVQRVVTIVVARYRMGISKSLMEASNHFAYVTSDSRFGPLLQNMSKQYLGRDFG---NGDGTDPDNIKPGMLNSLAERSMPLCMKQLHSALNREHKLKHWGRLQYGLFLKGAGLSVDDAMAFWQAMFTKIMGLDQFQKQYAYNVRHMYGKEGKRTNYTPYSCLKIIMGNPPAAGDHHGCPYRHYDEDHLSSLLSQVRIGATDKDAILRQVKSKNYQLACQRHFEATHKGYEASGVSTDGVGNHPNAWMHASMEFHKEK--AAGASGAQSSPAGKAIGRRPGEGGAPSPAAVVPATPSPSPSPAGTGKG 511          
BLAST of EWM29885.1 vs. NCBI_GenBank
Match: gi|698799030|ref|XP_009832544.1| (hypothetical protein H257_08389 [Aphanomyces astaci] >gi|574112715|gb|ETV78207.1| hypothetical protein H257_08389 [Aphanomyces astaci])

HSP 1 Score: 414.846 bits (1065), Expect = 1.871e-137
Identity = 210/467 (44.97%), Postives = 302/467 (64.67%), Query Frame = 0
Query:   25 LSLYNTAPQAEITLEEFELYALDRLQILRSIESLRLRGMKGDEFRMKLEEIISACMPMTLGTAEEVRKDQISHFILRIAYCKTEDLRRWFLKHESELFRFRLERLDSNERAKFMEQSGLAYDVVSKEDVLRLKAQLQAVPIFSQQPGYGQGIHTVEVTRTQFFRIPFTQALDLVAHRQVFLEGGFAYVPVERLVSIIVARFRSSLSRGLLEAFGAM--PYVLTDGRIAPLVSNMAKQYTGKDFSG--TKTGDSLDLNDLDMLADRSMPMCMRVLHKNLRLEHKLKHWGRLQYGLFLKGAGIGMEDAIQFWEKEFTKIMTTDVFNKQYAYSIRHYFGKEGKRKDYTPFNCSKIILGPGPGHGEFHGCPFRHYDEANLNKLLERAGVGAMDRDEMIKLSKGQHYQLACMKHFETTHKGAESLISMDGVGNHPNAFFAASMAFYKEK--NGEGGRRGGSPNPSSQTSASS 485
            LS+Y  AP  E+TLEEFE Y++DRL +L+++E  R+RG    E  +K+++ ++  +PM   T+E+  KDQ+SHFILR+A+C TE+LRRWFL HES LF+ RL+R    ++  FM  +GL Y+ V ++++  L  +L+ V   +      +    ++V      ++PFT+A+DL+  R+V+L+GG AYVP + LVSI+ ARFRSSLS+ L  AF          D R+ P++ N+AK + G D+S     +G+S+    +D L+  SMP+CM+ LH  L  +  LKH GR+QYGLFLKG G+ ++DAI+FW KEF K +  D FNK+YAY+IRH +GKEGKRKDYTP NC KII    P  GE+HGCPFRH+DE +L   L   G+G +D++ +++L+K + +Q+AC +HFE  H  A S    DGVGNHPNAFF  S  ++  +  N  G      PN +  T+  S
Sbjct:   26 LSMYQDAPVVEVTLEEFESYSIDRLHVLKTVEMHRVRGGNPRETEVKVDKALNMYLPMR--TSEDREKDQLSHFILRMAFCHTEELRRWFLAHESYLFKHRLDRATREDKMHFMRTNGLIYEQVDEDEMKALAPKLKTVRA-TTMTDMKEAYKDLDV----HVKVPFTEAIDLIGSRKVYLQGGIAYVPFDHLVSILYARFRSSLSKQLAVAFRKFGGSAASRDDRLMPVLKNLAKHHIGPDYSTAPVASGNSITAAMVDGLSKTSMPLCMKSLHLALTTQSHLKHGGRMQYGLFLKGMGLQLDDAIEFWRKEFCKKINVDDFNKKYAYNIRHNYGKEGKRKDYTPLNCMKIITSDPPKQGEYHGCPFRHFDEHHLRASLR--GIGEIDKEAIVQLAKAKQFQVACKRHFEAMHPKANS----DGVGNHPNAFFEESRKYFDSQPSNNNG---VTPPNNTPATAVKS 476          
BLAST of EWM29885.1 vs. NCBI_GenBank
Match: gi|1173936385|gb|OQR87344.1| (DNA primase [Achlya hypogyna])

HSP 1 Score: 412.92 bits (1060), Expect = 7.102e-137
Identity = 206/434 (47.47%), Postives = 290/434 (66.82%), Query Frame = 0
Query:   25 LSLYNTAPQAEITLEEFELYALDRLQILRSIESLRLRGMKGDEFRMKLEEIISACMPMTLGTAEEVRKDQISHFILRIAYCKTEDLRRWFLKHESELFRFRLERLDSNERAKFMEQSGLAYDVVSKEDVLRLKAQLQAVPIFSQQPGYGQGIHTVEVTRTQFFRIPFTQALDLVAHRQVFLEGGFAYVPVERLVSIIVARFRSSLSRGLLEAFGAM--PYVLTDGRIAPLVSNMAKQYTGKDFSG--TKTGDSLDLNDLDMLADRSMPMCMRVLHKNLRLEHKLKHWGRLQYGLFLKGAGIGMEDAIQFWEKEFTKIMTTDVFNKQYAYSIRHYFGKEGKRKDYTPFNCSKIILGPGPGHGEFHGCPFRHYDEANLNKLLERAGVGAMDRDEMIKLSKGQHYQLACMKHFETTHKGAESLISMDGVGNHPNAFF 454
            LS+Y   PQ E+TLE+FE Y++DRLQ+L++ E  RLRG   D+   KLE+ ++  +PM   TAE+  KD++SHFILR+A+C TE+LRRWFL  ES LFRFRL+    +E+ +FM++ GL YD V   ++  L+ QLQAV I S        I+  +V    + ++PFT+A+DL+  R+VFL+ G AYVP + LV+I+ ARFRS+LS+ L  AF          D R+ P++ N+AK + G DF      +G+++  + ++ LA  +MP+CM+ LH  L+ +  LKH GR+QYGLFLKG G+ MEDA+ FW   F K M  D FNK+YAY+IRH +GKEGKRKDYTPFNC KII    P  G++HGCPFRH+DE +L   L   G+  ++++ +++L+K ++YQ+AC +HFE    G  +    D VGNHPNAFF
Sbjct:   23 LSMYQEPPQVEVTLEQFEAYSIDRLQLLKTFELQRLRGAARDD--SKLEKAMNRFLPMR--TAEDREKDELSHFILRMAFCHTEELRRWFLSQESSLFRFRLDMASRDEKMQFMKRHGLVYDQVDSNEINSLRPQLQAVHIASV-ANMKDAINLPDV----YVKVPFTEAIDLIGQRKVFLKAGVAYVPFDHLVTILHARFRSTLSKQLAIAFRKFNGSAAARDDRLMPVLKNLAKHHIGPDFGAAPVSSGNAVTPDMIEGLAATAMPLCMKSLHHALKTQSHLKHGGRMQYGLFLKGIGLEMEDALTFWRNVFCKKMNVDDFNKKYAYNIRHNYGKEGKRKDYTPFNCMKIITADPPKAGDYHGCPFRHFDEHHLRASLR--GINEVEKESIVQLAKSKNYQVACRRHFEVLFPGGNA----DAVGNHPNAFF 441          
BLAST of EWM29885.1 vs. NCBI_GenBank
Match: gi|673037450|ref|XP_008872686.1| (hypothetical protein H310_08627 [Aphanomyces invadans] >gi|574471482|gb|ETV98489.1| hypothetical protein H310_08627 [Aphanomyces invadans])

HSP 1 Score: 412.535 bits (1059), Expect = 9.308e-137
Identity = 204/437 (46.68%), Postives = 288/437 (65.90%), Query Frame = 0
Query:   25 LSLYNTAPQAEITLEEFELYALDRLQILRSIESLRLRGMKGDEFRMKLEEIISACMPMTLGTAEEVRKDQISHFILRIAYCKTEDLRRWFLKHESELFRFRLERLDSNERAKFMEQSGLAYDVVSKEDVLRLKAQLQAVPIFSQQPGYGQGIHTVEVTRTQFFRIPFTQALDLVAHRQVFLEGGFAYVPVERLVSIIVARFRSSLSRGLLEAFGAM--PYVLTDGRIAPLVSNMAKQYTGKDFSG--TKTGDSLDLNDLDMLADRSMPMCMRVLHKNLRLEHKLKHWGRLQYGLFLKGAGIGMEDAIQFWEKEFTKIMTTDVFNKQYAYSIRHYFGKEGKRKDYTPFNCSKIILGPGPGHGEFHGCPFRHYDEANLNKLLERAGVGAMDRDEMIKLSKGQHYQLACMKHFETTHKGAESLISMDGVGNHPNAFFAAS 457
            LS+Y   P  E+TLEEFE Y++DRLQ+L+++E  R+RG    E   K+E+ ++  +PM   T E+  KDQ+SHFILR+A+C TE+LRRWFL HES LF+ RL+R    ++  FM  +GL Y+ V ++++  L  +L+ V   +      +    ++V      ++PFT+A+DL+  R+V+L+GG AYVP E LVSI+ ARFRSSLS+ L  AF          D R+ P++ N+AK + G D+S     +G+++    +D L+  SMP+CM+ LH+ L  +  LKH GR+QYGLFLKG G+ ++DA++FW KEF K M  D FNK+YAY+IRH +GKEGKRKDYTP NC KII    P  GE+HGCPFRH+DE +L   L   G+  +D++ +++L+K + YQ+AC +HFE  H  A S    D VGNHPNAFF  S
Sbjct:   26 LSMYQEPPVVEVTLEEFESYSIDRLQVLKTVEMHRVRGGNPRETETKVEKALNMYLPMR--TTEDREKDQLSHFILRMAFCHTEELRRWFLTHESYLFKHRLDRATREDKMHFMRTNGLIYEQVDEDELNILAPKLRTVRA-ANTTDMKEAYKDLDV----HVKVPFTEAIDLIGSRKVYLQGGVAYVPFEHLVSILYARFRSSLSKQLAVAFRKFGGSAAARDDRLMPVLKNLAKHHIGPDYSSAPVASGNTITAAMVDGLSKTSMPLCMKSLHQALTTQSHLKHGGRMQYGLFLKGVGLQLDDALEFWRKEFCKKMNVDDFNKKYAYNIRHNYGKEGKRKDYTPSNCMKIITADPPKQGEYHGCPFRHFDEHHLRASLR--GISEIDKEAIVQLAKAKQYQVACKRHFEAMHPNANS----DAVGNHPNAFFEES 449          
BLAST of EWM29885.1 vs. NCBI_GenBank
Match: gi|695411169|ref|XP_009525407.1| (hypothetical protein PHYSODRAFT_330433 [Phytophthora sojae] >gi|348682874|gb|EGZ22690.1| hypothetical protein PHYSODRAFT_330433 [Phytophthora sojae])

HSP 1 Score: 411.379 bits (1056), Expect = 3.139e-136
Identity = 209/458 (45.63%), Postives = 306/458 (66.81%), Query Frame = 0
Query:   19 REPTRLLSLYNTAPQAEITLEEFELYALDRLQILRSIESLRLRGMKGDEFRMKLEEIIS------ACMPMTLGTAE-EVRKDQISHFILRIAYCKTEDLRRWFLKHESELFRFRLERLDSNERAKFMEQSGLAYDVVSKEDVLRLKAQLQAVPIFSQQPGYGQGIHTVEVTRTQFFRIPFTQALDLVAHRQVFLEGGFAYVPVERLVSIIVARFRSSLSRGLLEAFGAMPYVLT--DGRIAPLVSNMAKQYTGKDFSGTK---TGDSLDLNDLDMLADRSMPMCMRVLHKNLRLEHKLKHWGRLQYGLFLKGAGIGMEDAIQFWEKEFTKIMTTDVFNKQYAYSIRHYFGKEGKRKDYTPFNCSKIILGPGPGHGEFHGCPFRHYDEANLNKLLERAGVGAMDRDEMIKLSKGQHYQLACMKHFETTHKGAESLISMDGVGNHPNAFFAASMAFYKEK 464
            R+   +LSLYN AP  E++LE+FE +A+DRL +L+++E+ RLR ++  +   +LE+ ++      A  PM  G AE +  KD +SHF LR+A+C+TE+LRRWFL  ES LFR+RL++L   E+  FM+Q+GL+YD  + +++   +++L+AV   +     G  +         +F++PFT+ALDLVA R+V++E G AYVP E +VSI+ A FR++LS+ L  AF      L   D R+AP++SN+AK +   D+S T    + +++  + +D LA  SMP+CMR LHK L+L H LK  GR QYGLFLKG G+ ++DAI +W++EF K M+ D FNK+YAY+IRH +GKEGKRKDY P NC +II G  P +GE+HGCPFRHY++ +L K L+  GV   D+ E++ L++  HYQ+AC K+FE TH G++     D + NHPN +F  S  +Y  K
Sbjct:   14 RQGLSMLSLYNEAPLVEVSLEQFEEFAIDRLHVLKAVENYRLRSVQMKDREGRLEKTLNKHMPLRAAAPMRAGQAENDATKDVLSHFFLRMAFCQTEELRRWFLTQESTLFRYRLDKLTREEKILFMKQNGLSYDEATLKEIEARQSKLKAVRDANDPKVRGHPL-------PAYFKVPFTEALDLVATRRVYIEAGTAYVPFEHVVSILFAAFRANLSKELSGAFRKYNRSLISKDDRLAPVLSNLAKHHIDADYSATPVPGSENAIRPDMIDGLAGTSMPLCMRSLHKGLKLNHHLKFAGRQQYGLFLKGIGLQLDDAIAYWKQEFCKKMSVDDFNKKYAYNIRHNYGKEGKRKDYAPSNCMRIITGDPPKNGEYHGCPFRHYEQEHLRKALQ--GVPEGDQQEILSLAENHHYQIACKKYFEATHPGSDP----DVLINHPNGYFEESRKYYAAK 458          
BLAST of EWM29885.1 vs. NCBI_GenBank
Match: gi|568045953|gb|ETM43079.1| (hypothetical protein L914_11371 [Phytophthora parasitica])

HSP 1 Score: 409.068 bits (1050), Expect = 2.053e-135
Identity = 207/461 (44.90%), Postives = 308/461 (66.81%), Query Frame = 0
Query:   16 RVKREPTRLLSLYNTAPQAEITLEEFELYALDRLQILRSIESLRLRGMKGDEFRMKLEEIISACMPMT------LGTAEE-VRKDQISHFILRIAYCKTEDLRRWFLKHESELFRFRLERLDSNERAKFMEQSGLAYDVVSKEDVLRLKAQLQAVPIFSQQPGYGQGIHTVEVTRTQFFRIPFTQALDLVAHRQVFLEGGFAYVPVERLVSIIVARFRSSLSRGLLEAFGAMPYVLT--DGRIAPLVSNMAKQYTGKDFSGTK---TGDSLDLNDLDMLADRSMPMCMRVLHKNLRLEHKLKHWGRLQYGLFLKGAGIGMEDAIQFWEKEFTKIMTTDVFNKQYAYSIRHYFGKEGKRKDYTPFNCSKIILGPGPGHGEFHGCPFRHYDEANLNKLLERAGVGAMDRDEMIKLSKGQHYQLACMKHFETTHKGAESLISMDGVGNHPNAFFAASMAFYKEK 464
            +V R    +LSLYN AP  E++LE+FE +A+DRL +L+++E+ RLR ++  +   +LE+ +S  MP+        G AE+   KD +SHF LR+A+C+TE+LRRWFL  ES LFR+RL++L   E+ +FM+Q+GL+Y+  + +++   +++L+ V   +     G+ +         +F++PFT+ALDLVA R+V++E G AYVP E +VSI+ A FR++LS+ L  AF      L   D R+AP++SN+AK +   D+S T    + +++  + +D LA  SMP+CMR LHK L+L H LK  GR QYGLFLKG G+ ++DAI +W++EF K M+ D FNK+YAY+IRH +GKEGKRKDY P NC +II G  P +GE+HGCPFRH+++ +L K L+  GV   D+ E++ L++  HYQ+AC K+FE TH G++     D + NHPN +F  S  +Y  K
Sbjct:   12 QVPRHGLSMLSLYNEAPLVEVSLEQFEEFAIDRLHVLKAVENYRLRSVQMKDREGRLEKTLSKHMPLRSAAPRRTGQAEDDAAKDVLSHFFLRMAFCQTEELRRWFLTQESTLFRYRLDKLTREEKIQFMKQNGLSYEEATMKEIEARQSKLKVVRDANDPKVRGKPL-------PAYFKVPFTEALDLVATRRVYIEAGTAYVPFEHVVSILFAAFRANLSKELSGAFRKYNRSLISKDERLAPVLSNLAKHHIDADYSSTPVPGSENAIRPDMIDGLAATSMPLCMRSLHKGLKLNHHLKFAGRQQYGLFLKGIGLQLDDAIAYWKQEFCKKMSVDDFNKKYAYNIRHNYGKEGKRKDYAPSNCMRIITGDPPKNGEYHGCPFRHFEQEHLRKALQ--GVSEGDKQEILSLAENHHYQIACKKYFEATHPGSDP----DVLINHPNGYFEESRKYYAAK 459          
BLAST of EWM29885.1 vs. NCBI_GenBank
Match: gi|566020196|gb|ETI43107.1| (hypothetical protein F443_11832 [Phytophthora parasitica P1569])

HSP 1 Score: 408.683 bits (1049), Expect = 3.419e-135
Identity = 207/461 (44.90%), Postives = 309/461 (67.03%), Query Frame = 0
Query:   16 RVKREPTRLLSLYNTAPQAEITLEEFELYALDRLQILRSIESLRLRGMKGDEFRMKLEEIISACMPMTL------GTAEE-VRKDQISHFILRIAYCKTEDLRRWFLKHESELFRFRLERLDSNERAKFMEQSGLAYDVVSKEDVLRLKAQLQAVPIFSQQPGYGQGIHTVEVTRTQFFRIPFTQALDLVAHRQVFLEGGFAYVPVERLVSIIVARFRSSLSRGLLEAFGAMPYVLT--DGRIAPLVSNMAKQYTGKDFSGTK---TGDSLDLNDLDMLADRSMPMCMRVLHKNLRLEHKLKHWGRLQYGLFLKGAGIGMEDAIQFWEKEFTKIMTTDVFNKQYAYSIRHYFGKEGKRKDYTPFNCSKIILGPGPGHGEFHGCPFRHYDEANLNKLLERAGVGAMDRDEMIKLSKGQHYQLACMKHFETTHKGAESLISMDGVGNHPNAFFAASMAFYKEK 464
            +V R    +LSLYN AP  E++LE+FE +A+DRL +L+++E+ RLR ++  +   +LE+ ++  MP+ L      G AE+   KD +SHF LR+A+C+TE+LRRWFL  ES LFR+RL++L   E+ +FM+Q+GL+Y+  + +++   +++L+ V   +     G+ +         +F++PFT+ALDLVA R+V++E G AYVP E +VSI+ A FR++LS+ L  AF      L   D R+AP++SN+AK +   D+S T    + +++  + +D LA  SMP+CMR LHK L+L H LK  GR QYGLFLKG G+ ++DAI +W++EF K M+ D FNK+YAY+IRH +GKEGKRKDY P NC +II G  P +GE+HGCPFRH+++ +L K L+  GV   D+ E++ L++  HYQ+AC K+FE TH G++     D + NHPN +F  S  +Y  K
Sbjct:   12 QVPRHGLSMLSLYNEAPLVEVSLEQFEEFAIDRLHVLKAVENYRLRSVQMKDREGRLEKTLNKHMPLRLAAPRRTGQAEDDAAKDVLSHFFLRMAFCQTEELRRWFLTQESTLFRYRLDKLTREEKIQFMKQNGLSYEEATMKEIEARQSKLKVVRDANDPKVRGKPL-------PAYFKVPFTEALDLVATRRVYIEVGTAYVPFEHVVSILFAAFRANLSKELSGAFRKYNRSLISKDERLAPVLSNLAKHHIDADYSSTPVPGSENAIRPDMIDGLAATSMPLCMRSLHKGLKLNHHLKFAGRQQYGLFLKGIGLQLDDAIAYWKQEFCKKMSVDDFNKKYAYNIRHNYGKEGKRKDYAPSNCMRIITGDPPKNGEYHGCPFRHFEQEHLRKALQ--GVSEGDKQEILSLAENHHYQIACKKYFEATHPGSDP----DVLINHPNGYFEESRKYYAAK 459          
BLAST of EWM29885.1 vs. NCBI_GenBank
Match: gi|970640925|gb|KUF83281.1| (DNA primase large subunit [Phytophthora nicotianae])

HSP 1 Score: 408.683 bits (1049), Expect = 3.689e-135
Identity = 206/461 (44.69%), Postives = 308/461 (66.81%), Query Frame = 0
Query:   16 RVKREPTRLLSLYNTAPQAEITLEEFELYALDRLQILRSIESLRLRGMKGDEFRMKLEEIISACMPMT------LGTAEE-VRKDQISHFILRIAYCKTEDLRRWFLKHESELFRFRLERLDSNERAKFMEQSGLAYDVVSKEDVLRLKAQLQAVPIFSQQPGYGQGIHTVEVTRTQFFRIPFTQALDLVAHRQVFLEGGFAYVPVERLVSIIVARFRSSLSRGLLEAFGAMPYVLT--DGRIAPLVSNMAKQYTGKDFSGTK---TGDSLDLNDLDMLADRSMPMCMRVLHKNLRLEHKLKHWGRLQYGLFLKGAGIGMEDAIQFWEKEFTKIMTTDVFNKQYAYSIRHYFGKEGKRKDYTPFNCSKIILGPGPGHGEFHGCPFRHYDEANLNKLLERAGVGAMDRDEMIKLSKGQHYQLACMKHFETTHKGAESLISMDGVGNHPNAFFAASMAFYKEK 464
            +V R    +LSLYN AP  E++LE+FE +A+DRL +L+++E+ RLR ++  +   +LE+ ++  MP+        G AE+   KD +SHF LR+A+C+TE+LRRWFL  ES LFR+RL++L   E+ +FM+Q+GL+Y+  + +++   +++L+ V   +     G+ +         +F++PFT+ALDLVA R+V++E G AYVP E +VSI+ A FR++LS+ L  AF      L   D R+AP++SN+AK +   D+S T    + +++  + +D LA  SMP+CMR LHK L+L H LK  GR QYGLFLKG G+ ++DAI +W++EF K M+ D FNK+YAY+IRH +GKEGKRKDY P NC +II G  P +GE+HGCPFRH+++ +L K L+  GV   D+ E++ L++  HYQ+AC K+FE TH G++     D + NHPN +F  S  +Y  K
Sbjct:   12 QVPRHXLSMLSLYNEAPLVEVSLEQFEEFAIDRLHVLKAVENYRLRSVQMKDREGRLEKTLNKHMPLRSAAPRRTGQAEDDAAKDVLSHFFLRMAFCQTEELRRWFLTQESTLFRYRLDKLTREEKIQFMKQNGLSYEEATMKEIEARQSKLKVVRDANDPKVRGKPL-------PAYFKVPFTEALDLVATRRVYIEAGTAYVPFEHVVSILFAAFRANLSKELSGAFRKYNRSLISKDERLAPVLSNLAKHHIDADYSSTPVPGSENAIRPDMIDGLAATSMPLCMRSLHKGLKLNHHLKFAGRQQYGLFLKGIGLQLDDAIAYWKQEFCKKMSVDDFNKKYAYNIRHNYGKEGKRKDYAPSNCMRIITGDPPKNGEYHGCPFRHFEQEHLRKALQ--GVSEGDKQEILSLAENHHYQIACKKYFEATHPGSDP----DVLINHPNGYFEESRKYYAAK 459          
BLAST of EWM29885.1 vs. NCBI_GenBank
Match: gi|567957599|gb|ETK83198.1| (hypothetical protein L915_11537 [Phytophthora parasitica] >gi|568015630|gb|ETL89807.1| hypothetical protein L917_11321 [Phytophthora parasitica] >gi|570323853|gb|ETO71801.1| hypothetical protein F444_11919 [Phytophthora parasitica P1976] >gi|570947641|gb|ETP12898.1| hypothetical protein F441_11791 [Phytophthora parasitica CJ01A1] >gi|570980305|gb|ETP41011.1| hypothetical protein F442_11745 [Phytophthora parasitica P10297])

HSP 1 Score: 408.297 bits (1048), Expect = 5.393e-135
Identity = 206/461 (44.69%), Postives = 308/461 (66.81%), Query Frame = 0
Query:   16 RVKREPTRLLSLYNTAPQAEITLEEFELYALDRLQILRSIESLRLRGMKGDEFRMKLEEIISACMPMT------LGTAEE-VRKDQISHFILRIAYCKTEDLRRWFLKHESELFRFRLERLDSNERAKFMEQSGLAYDVVSKEDVLRLKAQLQAVPIFSQQPGYGQGIHTVEVTRTQFFRIPFTQALDLVAHRQVFLEGGFAYVPVERLVSIIVARFRSSLSRGLLEAFGAMPYVLT--DGRIAPLVSNMAKQYTGKDFSGTK---TGDSLDLNDLDMLADRSMPMCMRVLHKNLRLEHKLKHWGRLQYGLFLKGAGIGMEDAIQFWEKEFTKIMTTDVFNKQYAYSIRHYFGKEGKRKDYTPFNCSKIILGPGPGHGEFHGCPFRHYDEANLNKLLERAGVGAMDRDEMIKLSKGQHYQLACMKHFETTHKGAESLISMDGVGNHPNAFFAASMAFYKEK 464
            +V R    +LSLYN AP  E++LE+FE +A+DRL +L+++E+ RLR ++  +   +LE+ ++  MP+        G AE+   KD +SHF LR+A+C+TE+LRRWFL  ES LFR+RL++L   E+ +FM+Q+GL+Y+  + +++   +++L+ V   +     G+ +         +F++PFT+ALDLVA R+V++E G AYVP E +VSI+ A FR++LS+ L  AF      L   D R+AP++SN+AK +   D+S T    + +++  + +D LA  SMP+CMR LHK L+L H LK  GR QYGLFLKG G+ ++DAI +W++EF K M+ D FNK+YAY+IRH +GKEGKRKDY P NC +II G  P +GE+HGCPFRH+++ +L K L+  GV   D+ E++ L++  HYQ+AC K+FE TH G++     D + NHPN +F  S  +Y  K
Sbjct:   12 QVPRHGLSMLSLYNEAPLVEVSLEQFEEFAIDRLHVLKAVENYRLRSVQMKDREGRLEKTLNKHMPLRSAAPRRTGQAEDDAAKDVLSHFFLRMAFCQTEELRRWFLTQESTLFRYRLDKLTREEKIQFMKQNGLSYEEATMKEIEARQSKLKVVRDANDPKVRGKPL-------PAYFKVPFTEALDLVATRRVYIEAGTAYVPFEHVVSILFAAFRANLSKELSGAFRKYNRSLISKDERLAPVLSNLAKHHIDADYSSTPVPGSENAIRPDMIDGLAATSMPLCMRSLHKGLKLNHHLKFAGRQQYGLFLKGIGLQLDDAIAYWKQEFCKKMSVDDFNKKYAYNIRHNYGKEGKRKDYAPSNCMRIITGDPPKNGEYHGCPFRHFEQEHLRKALQ--GVSEGDKQEILSLAENHHYQIACKKYFEATHPGSDP----DVLINHPNGYFEESRKYYAAK 459          
The following BLAST results are available for this feature:
BLAST of EWM29885.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585112468|gb|EWM29885.1|0.000e+0100.00dna primase large subunit [Nannochloropsis gaditan... [more]
gi|299471290|emb|CBN79116.1|2.041e-17150.10DNA primase [Ectocarpus siliculosus][more]
gi|698799030|ref|XP_009832544.1|1.871e-13744.97hypothetical protein H257_08389 [Aphanomyces astac... [more]
gi|1173936385|gb|OQR87344.1|7.102e-13747.47DNA primase [Achlya hypogyna][more]
gi|673037450|ref|XP_008872686.1|9.308e-13746.68hypothetical protein H310_08627 [Aphanomyces invad... [more]
gi|695411169|ref|XP_009525407.1|3.139e-13645.63hypothetical protein PHYSODRAFT_330433 [Phytophtho... [more]
gi|568045953|gb|ETM43079.1|2.053e-13544.90hypothetical protein L914_11371 [Phytophthora para... [more]
gi|566020196|gb|ETI43107.1|3.419e-13544.90hypothetical protein F443_11832 [Phytophthora para... [more]
gi|970640925|gb|KUF83281.1|3.689e-13544.69DNA primase large subunit [Phytophthora nicotianae... [more]
gi|567957599|gb|ETK83198.1|5.393e-13544.69hypothetical protein L915_11537 [Phytophthora para... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna781rna781Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications