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Properties
| Property Name | Value |
|---|
| Product | dynein light chain roadblock-type 1 |
| Orig transcript id | gnl|cribi|Naga_100035g35.3365.mrna |
| Orig protein id | gnl|cribi|Naga_100035g35.3365 |
| Gbkey | mRNA |
| Note | encoded by transcript variant 3; alternatively spliced |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002456.1 | supercontig | CM002456.1:381176..384596 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna773 ID=rna773|Name=rna773|organism=Nannochloropsis gaditana|type=mRNA|length=3110bp
TACGATACTTCACAATATGACAGTAATGAGCGTCAGCACTTAGTTCTTTA
ACGTGCGGCAATGCGCCGCATGAAAAATGTGCTGATCTATCAAAGCACGA
AGTGAACGCATTTGGTCTTACTGATCGCCATGACCTGGTAAACTGCCAGC
TTTCATCAACGACATAAAGCTCGATTTTCAAGTCAAGTGGCTTGATGTAC
GTCAAAGAGACAGAGGCGCAGTTTCACAACACAAAAGCAGAACTTTCTGT
ACCATAGTCTGCGGGCCTGCATGTACTTTCACGCTAGGGTAGGCAAAAAA
AACAGAACCTCAGTGCGCAGGGATAGCTGTGAGAGCGAGACCCGCGGCTG
CATGCCATCTGGATCTGACAAGCAGTATCCAAACGAGACAATTCCGAGAA
GCAAGACCCGCTACATCAGGGTCCCGTAAACTCAGGAAAATGTGGGGTAT
AGTGCAGTGTCTTTCGAGCGGGTTCAACTTCATTGATGAACGTGAGTGAG
TCTCCCTGGGGACCAATACTCCGCCGTGCCATAATGTTAAGAGAACACTG
ACTGCTTCGCAGAGCGGAAGCGATACAATACTTGAAAAAGGACAGCACGA
AGGCAATGCATGACAAAGCGATTTTGTTCATGTCGCCACAAGAAATACAC
CACACGTGCTTCCACTCGTCCCCACGCCAGGTCATTGGATAGCATGTCTT
ATCGCGCCGTACGTGTTTTAAAGTAAGTGACCCATCACAGTGATTTATAT
GAAGCGTAATGTTGCGGAGCGTTTACAATGTAGTTCTGTGACCAGATGCT
GTTGGCCTCCGCATGTGTGCGTTGCCCACCTAGATTATTACGGTACCTTG
CTTCTTTATGTGTTTCAGCATGTCATGTCACATCGTTCACTTCTACACCG
AGATGATGAATTGCAACCTTTGGATTATTTTCATGCAAGCAGCTTCTGAA
GCTCCTGCGAAAAAGTAGTATCGGCGACCCATCCTTTTTTATAGGCTGCT
AGTAACTACGTGGAAGGTAATGTAGTGGACGAAGATATTGTGGTGAGAGG
ATGATTGATTTTCCGTGAAGGCCCGCTGTGAGAGTCTACACTCTTCTCAA
GAATCTCTGAAACCATTTCTACCTACCTGTGTAACGTCCTTTTTCCGGGG
GTGGCTCCCGGTCGACGAAATCAATGTGGCAGATGCTACGGCGATGGCGT
TCTTGCTGTCGCGGGTACTATTGTTGCTCTCATTGTTCACCATGGCTGTC
CTGCCACTTCGCTCTATGTGGCGCTATGCTCATCCTTCCACCTGTGCTGC
CCGTGGCTTCCAGCGTCTGTCCTGCTTCCTCTGACCTTTTCCCAAACGAC
TTTTTTCTCGTGATGGCCTGCGGCTTCACATACAATTGCACACCGCGTTT
GCTGCCGTGCCCGTCTTTTATACCTTTCACCGAATTACCATAACGCACTT
GGACGATTCGTCTCAAAGGTTGAGGTTTCGCCGTTGGTTGATTACTTTTT
ATGAAATAGGGATGAAATATTAGGGGTGGATCAGAGAGAAGCATTTTAAC
TATTGCTTCGTCCATGACGTGACGTTTGCCCTCCGCTCAACAATTGGGAC
ATCTTCAGACGATCGACAGCGTCAAAATATGCACGAGGCTGGCACAGACA
ATCCGTTCATTTTCACTTACTTCACTGCCATCACGATACGTTGGGTTCCG
CTGGGTGCTTTCATGAACTGCTTCCTCTTGGCATCCTTTGCAGCGCTGGC
CTTCGGCGTGTTCATACTAACCTGGCCCGTTCGAGAGGAATGCAGCTGAG
CTGGTGCGTTGGATAGGGCAACTCGAGCAAACAAGTGAAAGAAGAGTGAT
GGAAGCATCGATTCAAAGTTACCCACGATCGTCATGAAGAGGGCTGCTTA
ACACTTTATTCAGTGCGCGAAAGATGAAGCATTCAATCGACTGATTTTCT
AAAAAAAGATCCATTATTGGACTCCATTACATGTGTTTATGCCGACCTTA
CGTGTCATGCCGGAGTTTTGAATTTATTTGCATCTTCTTGTCCCCGACTT
TTGAACGAGGAGGTCGCCCAACGCTCGAACAAAGCACGCAGTTCTGCTCC
CCTGTATCGCAACCGCTACACGAATCACCTACCAAGCGTGGCTTCAAACT
TGCCAAGCGTAGTGGGCAAGGGGCAAGGCCTCTTTTCGTGTTCACACAAG
AAAACGCAGGCCCTAAAGACATGGTCTCCCGCTAGTAACGGTTTTCCGAG
TTTTCCTCACTTTCACGGCGCAATTACTAGGTGGATTAAAACATTAGCAG
AACAAAGTTTCATTCCAACATTCATCCAAATAGGTACTTATTCAAGGATA
AACACCAAAGGCCACAGTTTCATTATGGTAAGCCTTTTTCGTTTCATTTT
CGAATATTACAAGCATAACTATGTAAAATTTCCATTCTGGAAGTCGCAGG
TGGAGGACATCCTGGAGCGCATCAAGACGAAACCGAGTGTGGAAGGCTAC
CTAATTGCAAATCAAACAGGCCAAGTTCTTCGCCGCTCACCAAAAATGAA
TGAGGACGAAGCACATGGCATGGCGACCACTATGCGACCACTAGTCTTGA
AAGCAGAAAATGTCGTGAGAGATCTAGATCCACAGAACGAGCTACAATTT
CTGCGCATCAAAACGAAGAATCGAGAAATTATTTCTACCATTAGTACGTT
GAAGACTGTCTTTTTCATCCTTGGACTTCGTTCATATTATGCACATACCA
ACCTTATATATTGCAGGCGACGACTTTCTGGTGACCGTCCTACAGCGGTG
GAGCCCGTCTACCGCTTGACGGCTTAATTTCCAATTTTTCTAGAAAGCAA
AAAGGCTTGCAACGGCACTATGTATGCAAAGTTTGGGCAATTTTCGTTAC
TTGTTACTGTTGTGTCTGAACGAACGTTACTTGTTACTGTTGTGTCTGAA
CGAACGTTACTTGTTACTGTTGCGTCGGAACGAAGCATCGGCATGCACTT
TACTAACATTTTATTGCTTGTGACGGTCATGCACAAAAATAATGCGGGAA
GTTAAAGTATGTCAAATAAAGAACTTTGGATAAAGCACTAAAAAAAACTA
AAATACAATG back to topprotein sequence of rna773 >rna773-protein ID=rna773-protein|Name=rna773|organism=Nannochloropsis gaditana|type=polypeptide|length=150bp
MVSLFRFIFEYYKHNYVKFPFWKSQVEDILERIKTKPSVEGYLIANQTGQ
VLRRSPKMNEDEAHGMATTMRPLVLKAENVVRDLDPQNELQFLRIKTKNR
EIISTISTLKTVFFILGLRSYYAHTNLIYCRRRLSGDRPTAVEPVYRLTA back to topmRNA from alignment at CM002456.1:381176..384596+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna773 ID=rna773|Name=rna773|organism=Nannochloropsis gaditana|type=mRNA|length=3421bp|location=Sequence derived from alignment at CM002456.1:381176..384596+ (Nannochloropsis gaditana)
TACGATACTTCACAATATGACAGTAATGAGCGTCAGCACTTAGTTCTTTA
ACGTGCGGCAATGCGCCGCATGAAAAATGTGCTGATCTATCAAAGCACGA
AGTGAACGCATTTGGTCTTACTGATCGCCATGACCTGGTAAACTGCCAGC
TTTCATCAACGACATAAAGCTCGATTTTCAAGTCAAGTGGCTTGATGTAC
GTCAAAGAGACAGAGGCGCAGTTTCACAACACAAAAGCAGAACTTTCTGT
ACCATAGTCTGCGGGCCTGCATGTACTTTCACGCTAGGGTAGGCAAAAAA
AACAGAACCTCAGTGCGCAGGGATAGCTGTGAGAGCGAGACCCGCGGCTG
CATGCCATCTGGATCTGACAAGCAGTATCCAAACGAGACAATTCCGAGAA
GCAAGACCCGCTACATCAGGGTCCCGTAAACTCAGGAAAATGTGGGGTAT
AGTGCAGTGTCTTTCGAGCGGGTTCAACTTCATTGATGAACGTGAGTGAG
TCTCCCTGGGGACCAATACTCCGCCGTGCCATAATGTTAAGAGAACACTG
ACTGCTTCGCAGAGCGGAAGCGATACAATACTTGAAAAAGGACAGCACGA
AGGCAATGCATGACAAAGCGATTTTGTTCATGTCGCCACAAGAAATACAC
CACACGTGCTTCCACTCGTCCCCACGCCAGGTCATTGGATAGCATGTCTT
ATCGCGCCGTACGTGTTTTAAAGTAAGTGACCCATCACAGTGATTTATAT
GAAGCGTAATGTTGCGGAGCGTTTACAATGTAGTTCTGTGACCAGATGCT
GTTGGCCTCCGCATGTGTGCGTTGCCCACCTAGATTATTACGGTACCTTG
CTTCTTTATGTGTTTCAGCATGTCATGTCACATCGTTCACTTCTACACCG
AGATGATGAATTGCAACCTTTGGATTATTTTCATGCAAGCAGCTTCTGAA
GCTCCTGCGAAAAAGTAGTATCGGCGACCCATCCTTTTTTATAGGCTGCT
AGTAACTACGTGGAAGGTAATGTAGTGGACGAAGATATTGTGGTGAGAGG
ATGATTGATTTTCCGTGAAGGCCCGCTGTGAGAGTCTACACTCTTCTCAA
GAATCTCTGAAACCATTTCTACCTACCTGTGTAACGTCCTTTTTCCGGGG
GTGGCTCCCGGTCGACGAAATCAATGTGGCAGATGCTACGGCGATGGCGT
TCTTGCTGTCGCGGGTACTATTGTTGCTCTCATTGTTCACCATGGCTGTC
CTGCCACTGTAAGTGGTCAGACCGTCTCTCTTTGCATGATTTATGGGGTG
AAACTTCTTAACTTGCGTGTTGCTACTGTCGCTATTGTTGTCGAGCAGGA
ATTTCACACCTACTCGAGGCCCTGCCACTCCAATCGTTTTCCTCGCAGTC
GCTCTATGTGGCGCTATGCTCATCCTTCCACCTGTGCTGCCCGTGGCTTC
CAGCGTCTGTCCTGCTTCCTCTGACCTTTTCCCAAACGACTTTTTTCTCG
TGATGGCCTGCGGCTTCACATACAATTGCACACCGCGTTTGCTGCCGTGC
CCGTCTTTTATACCTTTCACCGAATTACCATAACGCACTTGGACGATTCG
TCTCAAAGGTTGAGGTTTCGCCGTTGGTTGATTACTTTTTATGAAATAGG
GATGAAATATTAGGGGTGGATCAGAGAGAAGCATTTTAACTATTGCTTCG
TCCATGACGTGACGTTTGCCCTCCGCTCAACAATTGGGACATCTTCAGAC
GATCGACAGCGTCAAAATATGCACGAGGCTGGCACAGACAATCCGTTCAT
TTTCACTTACTTCACTGCCATCACGATACGTTGGGTTCCGCTGGGTGCTT
TCATGAACTGCTTCCTCTTGGCATCCTTTGCAGCGCTGGCCTTCGGCGTG
TTCATACTAACCTGGCCCGTTCGAGAGGAATGCAGCTGAGCTGGTGCGTT
GGATAGGGCAACTCGAGCAAACAAGTGAAAGAAGAGTGATGGAAGCATCG
ATTCAAAGTTACCCACGATCGTCATGAAGAGGGCTGCTTAACACTTTATT
CAGTGCGCGAAAGATGAAGCATTCAATCGACTGATTTTCTAAAAAAAGAT
CCATTATTGGACTCCATTACATGTGTTTATGCCGACCTTACGTGTCATGC
CGGAGTTTTGAATTTATTTGCATCTTCTTGTCCCCGACTTTTGAACGAGG
AGGTCGCCCAACGCTCGAACAAAGCACGCAGTTCTGCTCCCCTGTATCGC
AACCGCTACACGAATCACCTACCAAGCGTGGCTTCAAACTTGCCAAGCGT
AGTGGGCAAGGGGCAAGGCCTCTTTTCGTGTTCACACAAGAAAACGCAGG
CCCTAAAGACATGGTCTCCCGCTAGTAACGGTTTTCCGAGTTTTCCTCAC
TTTCACGGCGCAATTACTAGGTGGATTAAAACATTAGCAGAACAAAGTTT
CATTCCAACATTCATCCAAATAGGTACTTATTCAAGGATAAACACCAAAG
GCCACAGTTTCATTATGGTAAGCCTTTTTCGTTTCATTTTCGAATATTAC
AAGCATAACTATGTAAAATTTCCATTCTGGAAGTCgcaggtggaggacat
cCTGGAGCGCATCAAGACGAAACCGAGTGTGGAAGGGTGAGTTTTGTATG
TTTATCATATTTTAACAAGGTGGAATATCTTACAGAGCCCCGCACAATCT
TGCCAGCTACCTAATTGCAAATCAAACAGGCCAAGTTCTTCGCCGCTCAC
CAAAAATGAATGAGGACGAAGCACATGGCATGGCGACCACTATGCGACCA
CTAGTCTTGAAAGCAGAAAATGTCGTGAGAGATCTAGATCCACAGGTAAG
ACTCCCTAACTCTTCACCAAAAAGGGGCCAGAGATTTCCCTCCTTTAAGA
TTTCTtccgcccttctctttcctttcttcacaATCTACATCGCTAGAACG
AGCTACAATTTCTGCGCATCAAAACGAAGAATCGAGAAATTATTTCTACC
ATTAGTACGTTGAAGACTGTCTTTTTCATCCTTGGACTTCGTTCATATTA
TGCACATACCAACCTTATATATTGCAGGCGACGACTTTCTGGTGACCGTC
CTACAGCGGTGGAGCCCGTCTACCGCTTGACGGCTTAATTTCCAATTTTT
CTAGAAAGCAAAAAGGCTTGCAACGGCACTATGTATGCAAAGTTTGGGCA
ATTTTCGTTACTTGTTACTGTTGTGTCTGAACGAACGTTACTTGTTACTG
TTGTGTCTGAACGAACGTTACTTGTTACTGTTGCGTCGGAACGAAGCATC
GGCATGCACTTTACTAACATTTTATTGCTTGTGACGGTCATGCACAAAAA
TAATGCGGGAAGTTAAAGTATGTCAAATAAAGAACTTTGGATAAAGCACT
AAAAAAAACTAAAATACAATG back to topCoding sequence (CDS) from alignment at CM002456.1:381176..384596+ >rna773 ID=rna773|Name=rna773|organism=Nannochloropsis gaditana|type=CDS|length=1359bp|location=Sequence derived from alignment at CM002456.1:381176..384596+ (Nannochloropsis gaditana)
ATGGTAAGCCTTTTTCGTTTCATTTTCGAATATTACAAGCATAACTATGT
AAAATTTCCATTCTGGAAGTCgcaggtggaggacatcCTGGAGCGCATCA
AGACGAAACCGAGTGTGGAAGGCTACCTAATTGCAAATCAAACAGGCCAA
GTTCTTCGCCGCTCACCAAAAATGAATGAGGACGAAGCACATGGCATGGC
GACCACTATGCGACCACTAGTCTTGAAAGCAGAAAATGTCGTGAGAGATC
TAGATCCACAGAACGAGCTACAATTTCTGCGCATCAAAACGAAGAATCGA
GAAATTATTTCTACCATTAGTACGTTGAAGACTGTCTTTTTCATCCTTGG
ACTTCGTTCATATTATGCACATACCAACCTTATATATTGCAGGCGACGAC
TTTCTGGTGACCGTCCTACAGCGGTGGAGCCCGTCTACCGCTTGACGGCT
TAAATGGTAAGCCTTTTTCGTTTCATTTTCGAATATTACAAGCATAACTA
TGTAAAATTTCCATTCTGGAAGTCgcaggtggaggacatcCTGGAGCGCA
TCAAGACGAAACCGAGTGTGGAAGGCTACCTAATTGCAAATCAAACAGGC
CAAGTTCTTCGCCGCTCACCAAAAATGAATGAGGACGAAGCACATGGCAT
GGCGACCACTATGCGACCACTAGTCTTGAAAGCAGAAAATGTCGTGAGAG
ATCTAGATCCACAGAACGAGCTACAATTTCTGCGCATCAAAACGAAGAAT
CGAGAAATTATTTCTACCATTAGTACGTTGAAGACTGTCTTTTTCATCCT
TGGACTTCGTTCATATTATGCACATACCAACCTTATATATTGCAGGCGAC
GACTTTCTGGTGACCGTCCTACAGCGGTGGAGCCCGTCTACCGCTTGACG
GCTTAAATGGTAAGCCTTTTTCGTTTCATTTTCGAATATTACAAGCATAA
CTATGTAAAATTTCCATTCTGGAAGTCgcaggtggaggacatcCTGGAGC
GCATCAAGACGAAACCGAGTGTGGAAGGCTACCTAATTGCAAATCAAACA
GGCCAAGTTCTTCGCCGCTCACCAAAAATGAATGAGGACGAAGCACATGG
CATGGCGACCACTATGCGACCACTAGTCTTGAAAGCAGAAAATGTCGTGA
GAGATCTAGATCCACAGAACGAGCTACAATTTCTGCGCATCAAAACGAAG
AATCGAGAAATTATTTCTACCATTAGTACGTTGAAGACTGTCTTTTTCAT
CCTTGGACTTCGTTCATATTATGCACATACCAACCTTATATATTGCAGGC
GACGACTTTCTGGTGACCGTCCTACAGCGGTGGAGCCCGTCTACCGCTTG
ACGGCTTAA back to top
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