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Properties
| Property Name | Value |
|---|
| Product | lysine-specific demethylase |
| Orig transcript id | gnl|cribi|Naga_100035g32.3373.mrna |
| Orig protein id | gnl|cribi|Naga_100035g32.3373 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002456.1 | supercontig | CM002456.1:378278..381292 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna770 ID=rna770|Name=rna770|organism=Nannochloropsis gaditana|type=mRNA|length=345bp
ATGGAAATTGACTTCTTGACATTCTGCATCCTGTTTTTCCTGGCTTCCTT
TCTCTTAGCCTTTGTGGAACTGGCCATAAAAAGTACTCCTATAAGCCAAG
AAGATTACGAAAAAACGTATGGTATCCCTCCAGGTCTTGACGATCTCGAT
TATCAAGACGGAGGATGGCGTTACAAGTCAAGTGGACGACTCGCAACCAA
AAGTGAGATAGAAAGAGCGGGGTTAGTGTGGCCAAAGACACAACCTGGGA
GAAAAGGAAATACCTCGGGTAGCAGGACAAACAACGCGCCAGAGAAACAG
ACGAATGTTGCAGACCCGAGCACAAATGACAAAAAGATTGCGTGA back to topprotein sequence of rna770 >rna770-protein ID=rna770-protein|Name=rna770|organism=Nannochloropsis gaditana|type=polypeptide|length=722bp
MSSVKVEAPETSYDGYRESYHPPQDIDCHRHKNTSLDKMDDKESSAKRIN
GLGSEVMEYGIQVVKGKDEGSRGVSTSAASATPVPSASATAATQLSDATS
ANSTDSNIVSRRKQEPAGTTPAQARGNNKRNLPSVSSAGGVARENGGKRS
RRPPPRFGETAGLDRREESILRQAIENSKIETHLCDTVEIGEVPVFRPSL
AEFADPIQFIESVKQAGDHFGIVKIIPPPGWSPPPQDEMHRSCKTPVKTR
LQSLKYFKEGTGVADGKDYTFAEYENMAVQFSEKWQKERYQGQGKDAPTH
EDLERDYWRIIEAAEEVVDVEYGNDLDTLTYGSGFPRATDLMMPRSEGST
EDRFAIETIGKDREGRGRLLGTPEYYERCGWNMNNLPLWPGSVLRYIRAP
LKGVNVPWLYLGMQFATFCWHNEDNFMFSINYLHRGAAKQWYSIPGSKAD
VMEKVMKGFLREVFANNPDLLHHMTNQFHPVLFHRAGVPVFKARQEPGEF
IVTFPKSFHAGFNYGFNVAEAVNFSPPLWLPLGREAMERYRRFARESVVS
HDRLVLTLAHNLCPEWSIPSLQALLHDLTLIVKEEEFWRSQLTRQGLRVD
IVPPSKLLPNNLKEMDDASLDYDEKRVCLSCKHVCFLSAVACECSESKVV
CLREVPLLCKCRMDQRYLMAWHSISDLWDMVRRVEEYLKARLGEMGKRDG
QKEEEEGGGSTTSDGEESGETL back to topmRNA from alignment at CM002456.1:378278..381292- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna770 ID=rna770|Name=rna770|organism=Nannochloropsis gaditana|type=mRNA|length=3015bp|location=Sequence derived from alignment at CM002456.1:378278..381292- (Nannochloropsis gaditana)
GACCAAATGCGTTCACTTCGTGCTTTGATAGATCAGCACATTTTTCATGC
GGCGCATTGCCGCACGTTAAAGAACTAAGTGCTGACGCTCATTACTGTCA
TATTGTGAAGTATCGTATCACAAGGCAAATGGGGTCAGGCTTCGTATCAT
ATGTCTCTGAAGAGTCATTCTCACTCCTAACAACGCGACGTGTTTTTCCC
TCCTGGCTCTTGACACGACCCTGCAGGCACAATTCATTACCAGAAAGAAG
GAGTTTCCTTCCCTTTTCTTCACGGATTTTTTGTTTGTGGTGTCGTTCAA
GTGCCGTAAACCAGAGATGTCGAGCGTGAAAGTGGAGGCCCCGGAGACCT
CCTATGACGGGTACCGCGAGAGTTACCATCCTCCTCAAGATATCGACTGT
CACCGACACAAGAACACCAGCCTCGACAAGATGGACGACAAGGAGAGCAG
TGCCAAGCGTATCAATGGGTTGGGATCAGAAGTCATGGAATACGGAATCC
AAGTAGTGAAAGGGAAGGATGAGGGAAGCAGGGGGGTCTCCACCTCGGCA
GCCTCAGCGACCCCAGTGCCTAGTGCCAGCGCTACTGCCGCAACTCAGCT
CTCGGATGCGACAAGTGCAAACAGTACCGACTCAAATATCGTCAGCAGAA
GGAAGCAGGAGCCGGCCGGAACGACGCCGGCACAGGCCAGAGGAAACAAC
AAACGCAACCTGCCTTCTGTCTCATCTGCCGGGGGGGTTGCCAGAGAAAA
TGGAGGCAAGCGTTCTCGACGACCGCCGCCAAGATTTGGGGAGACCGCTG
GATTGGATAGGCGGGAAGAGTCCATTTTGCGACAGGCCATTGAGAACTCC
AAAATAGAGACGCATTTGTGCGATACTGTCGAGATTGGGGAGGTGCCGGT
CTTCCGGTAGGTTGGAAGGCGGAAAATTGATGCAAAGGGAGGAGGGCTCA
TTGTCATGAATCAACCCCCCTCCCCCCAAACGGGGAGAAAGGGTACCTGT
GGACACTTTCTGGTCGATATGAGGTACCAGTGTATCGTCCAAGGGGAGTG
AGATCCTATAGGCCTGTCGGGCCCCCCCAACATACCTCTCTCGGTGAATG
GATTCTGTCTCTTTGGTGCATAGTTTTTGCCGTGATGCTCATGTATATCT
TACAATCTGCACATCTCACACTACATTTCTCTCAGGCCTTCTCTCGCGGA
ATTTGCAGACCCCATCCAGTTCATTGAGAGTGTCAAGCAGGCGGGCGATC
ATTTCGGCATCGTCAAGATCATTCCTCCGCCCGGATGGTCACCCCCACCT
CAAGACGAGATGCATCGCTCCTGCAAGACCCCCGTCAAAACCCGGCTGCA
GAGTCTCAAATACTTCAAGGAGGGCACCGGCGTAGCGGATGGGAAGGACT
ACACTTTTGCGGAGTACGAGAACATGGCCGTGCAATTCAGTGAGAAATGG
CAAAAAGAAAGGTACCAGGGTCAGGGCAAAGATGCGCCCACCCACGAGGA
TCTCGAGAGGGATTACTGGCGCATCATCGAGGCGGCCGAGGAGGTTGTGG
ATGTGGAGTACGGAAACGACCTGGACACTCTCACCTACGGCAGTGGGTTC
CCACGGGCCACGGATCTGATGATGCCGAGGTCGGAGGGCAGTACAGAGGA
TCGCTTCGCAATTGAGACGATCGGGAAGGATCGGGAAGGGAGGGGACGAC
TGTTGGGTACCCCCGAGTACTACGAGCGGTGCGGATGGAACATGAACAAT
CTGCCTCTTTGGCCCGGCTCCGTCTTGAGGTACATCCGAGCCCCCCTGAA
AGGCGTCAACGTGCCCTGGCTCTATTTGGGCATGCAATTTGCTACCTTCT
GCTGGCACAACGAGGACAATTTTATGTTTTCGATCAACTACCTCCACCGA
GGGGCTGCCAAGCAATGGTATTCGATCCCAGGCTCCAAGGCCGACGTGAT
GGAGAAGGTCATGAAGGGCTTCTTGCGGGAAGTGTTCGCCAACAACCCCG
ACCTTTTGCACCACATGACCAATCAGTTCCATCCTGTCCTCTTTCACCGC
GCGGGCGTTCCCGTATTCAAGGCAAGGCAAGAGCCAGGGGAATTCATCGT
CACTTTTCCCAAGTCCTTTCACGCGGGATTCAACTACGGATTTAATGTTG
CGGAAGCTGTGAATTTCTCTCCTCCTCTCTGGTTGCCTTTGGGACGGGAG
GCGATGGAGCGATATCGTCGGTTTGCACGCGAATCCGTCGTCTCCCACGA
CCGACTGGTCTTGACCTTGGCGCACAATTTGTGCCCTGAGTGGTCGATTC
CGTCCCTCCAAGCCTTGCTGCACGATCTGACGCTGATTGTCAAAGAGGAA
GAGTTTTGGAGGAGCCAATTGACGCGGCAAGGGTTGCGAGTCGACATCGT
CCCGCCATCCAAGCTGCTGCCCAACAATTTGAAGGAAATGGACGATGCCT
CTCTCGACTATGACGAGAAGCGGGTCTGTTTAAGCTGTAAGCATGTGTGC
TTCCTGTCGGCTGTGGCATGCGAATGCAGTGAATCTAAAGTGGTATGTCT
GAGGGAAGTGCCTTTGCTCTGTAAGTGCCGTATGGATCAGAGATATTTGA
TGGCCTGGCACAGCATAAGTGACCTCTGGGACATGGTCAGACGCGTGGAG
GAGTATTTGAAAGCCAGATTGGGGGAGATGGGGAAAAGGGATGGTCAAAA
GGAGGAGGAGGAGGGAGGCGGTTCGACGACAAGCGATGGAGAGGAGTCAG
GGGAAACGCTGTGACGAGAGAAAGCGCGGGAAATGGGGCATGTACATCGT
CAGGTTATGAGGAAACAGCGTGCATATTCTATGGCGTGATTTTTATTTGT
CTTCTCTCCATTTGGGGTACAGGTGAGAGTATATAGCCTTTTTCACCCCG
ATCCTGTACTGTTTGGAGTTCGTGTTCTAACGGATAAAGGCTTCAAGATA
AAGATGAAATGACTGAAAAAATAACCTTCGCGAAGAATTGCATGACATAA
ATAGTAGCACGTCCT back to topCoding sequence (CDS) from alignment at CM002456.1:378278..381292- >rna770 ID=rna770|Name=rna770|organism=Nannochloropsis gaditana|type=CDS|length=4338bp|location=Sequence derived from alignment at CM002456.1:378278..381292- (Nannochloropsis gaditana)
GCCTTCTCTCGCGGAATTTGCAGACCCCATCCAGTTCATTGAGAGTGTCA
AGCAGGCGGGCGATCATTTCGGCATCGTCAAGATCATTCCTCCGCCCGGA
TGGTCACCCCCACCTCAAGACGAGATGCATCGCTCCTGCAAGACCCCCGT
CAAAACCCGGCTGCAGAGTCTCAAATACTTCAAGGAGGGCACCGGCGTAG
CGGATGGGAAGGACTACACTTTTGCGGAGTACGAGAACATGGCCGTGCAA
TTCAGTGAGAAATGGCAAAAAGAAAGGTACCAGGGTCAGGGCAAAGATGC
GCCCACCCACGAGGATCTCGAGAGGGATTACTGGCGCATCATCGAGGCGG
CCGAGGAGGTTGTGGATGTGGAGTACGGAAACGACCTGGACACTCTCACC
TACGGCAGTGGGTTCCCACGGGCCACGGATCTGATGATGCCGAGGTCGGA
GGGCAGTACAGAGGATCGCTTCGCAATTGAGACGATCGGGAAGGATCGGG
AAGGGAGGGGACGACTGTTGGGTACCCCCGAGTACTACGAGCGGTGCGGA
TGGAACATGAACAATCTGCCTCTTTGGCCCGGCTCCGTCTTGAGGTACAT
CCGAGCCCCCCTGAAAGGCGTCAACGTGCCCTGGCTCTATTTGGGCATGC
AATTTGCTACCTTCTGCTGGCACAACGAGGACAATTTTATGTTTTCGATC
AACTACCTCCACCGAGGGGCTGCCAAGCAATGGTATTCGATCCCAGGCTC
CAAGGCCGACGTGATGGAGAAGGTCATGAAGGGCTTCTTGCGGGAAGTGT
TCGCCAACAACCCCGACCTTTTGCACCACATGACCAATCAGTTCCATCCT
GTCCTCTTTCACCGCGCGGGCGTTCCCGTATTCAAGGCAAGGCAAGAGCC
AGGGGAATTCATCGTCACTTTTCCCAAGTCCTTTCACGCGGGATTCAACT
ACGGATTTAATGTTGCGGAAGCTGTGAATTTCTCTCCTCCTCTCTGGTTG
CCTTTGGGACGGGAGGCGATGGAGCGATATCGTCGGTTTGCACGCGAATC
CGTCGTCTCCCACGACCGACTGGTCTTGACCTTGGCGCACAATTTGTGCC
CTGAGTGGTCGATTCCGTCCCTCCAAGCCTTGCTGCACGATCTGACGCTG
ATTGTCAAAGAGGAAGAGTTTTGGAGGAGCCAATTGACGCGGCAAGGGTT
GCGAGTCGACATCGTCCCGCCATCCAAGCTGCTGCCCAACAATTTGAAGG
AAATGGACGATGCCTCTCTCGACTATGACGAGAAGCGGGTCTGTTTAAGC
TGTAAGCATGTGTGCTTCCTGTCGGCTGTGGCATGCGAATGCAGTGAATC
TAAAGTGGTATGTCTGAGGGAAGTGCCTTTGCTCTGTAAGTGCCGTATGG
ATCAGAGATATTTGATGGCCTGGCACAGCATAAGTGACCTCTGGGACATG
GTCAGACGCGTGGAGGAGTATTTGAAAGCCAGATTGGGGGAGATGGGGAA
AAGGGATGGTCAAAAGGAGGAGGAGGAGGGAGGCGGTTCGACGACAAGCG
ATGGAGAGGAGTCAGGGGAAACGCTGTGAATGTCGAGCGTGAAAGTGGAG
GCCCCGGAGACCTCCTATGACGGGTACCGCGAGAGTTACCATCCTCCTCA
AGATATCGACTGTCACCGACACAAGAACACCAGCCTCGACAAGATGGACG
ACAAGGAGAGCAGTGCCAAGCGTATCAATGGGTTGGGATCAGAAGTCATG
GAATACGGAATCCAAGTAGTGAAAGGGAAGGATGAGGGAAGCAGGGGGGT
CTCCACCTCGGCAGCCTCAGCGACCCCAGTGCCTAGTGCCAGCGCTACTG
CCGCAACTCAGCTCTCGGATGCGACAAGTGCAAACAGTACCGACTCAAAT
ATCGTCAGCAGAAGGAAGCAGGAGCCGGCCGGAACGACGCCGGCACAGGC
CAGAGGAAACAACAAACGCAACCTGCCTTCTGTCTCATCTGCCGGGGGGG
TTGCCAGAGAAAATGGAGGCAAGCGTTCTCGACGACCGCCGCCAAGATTT
GGGGAGACCGCTGGATTGGATAGGCGGGAAGAGTCCATTTTGCGACAGGC
CATTGAGAACTCCAAAATAGAGACGCATTTGTGCGATACTGTCGAGATTG
GGGAGGTGCCGGTCTTCCGGCCTTCTCTCGCGGAATTTGCAGACCCCATC
CAGTTCATTGAGAGTGTCAAGCAGGCGGGCGATCATTTCGGCATCGTCAA
GATCATTCCTCCGCCCGGATGGTCACCCCCACCTCAAGACGAGATGCATC
GCTCCTGCAAGACCCCCGTCAAAACCCGGCTGCAGAGTCTCAAATACTTC
AAGGAGGGCACCGGCGTAGCGGATGGGAAGGACTACACTTTTGCGGAGTA
CGAGAACATGGCCGTGCAATTCAGTGAGAAATGGCAAAAAGAAAGGTACC
AGGGTCAGGGCAAAGATGCGCCCACCCACGAGGATCTCGAGAGGGATTAC
TGGCGCATCATCGAGGCGGCCGAGGAGGTTGTGGATGTGGAGTACGGAAA
CGACCTGGACACTCTCACCTACGGCAGTGGGTTCCCACGGGCCACGGATC
TGATGATGCCGAGGTCGGAGGGCAGTACAGAGGATCGCTTCGCAATTGAG
ACGATCGGGAAGGATCGGGAAGGGAGGGGACGACTGTTGGGTACCCCCGA
GTACTACGAGCGGTGCGGATGGAACATGAACAATCTGCCTCTTTGGCCCG
GCTCCGTCTTGAGGTACATCCGAGCCCCCCTGAAAGGCGTCAACGTGCCC
TGGCTCTATTTGGGCATGCAATTTGCTACCTTCTGCTGGCACAACGAGGA
CAATTTTATGTTTTCGATCAACTACCTCCACCGAGGGGCTGCCAAGCAAT
GGTATTCGATCCCAGGCTCCAAGGCCGACGTGATGGAGAAGGTCATGAAG
GGCTTCTTGCGGGAAGTGTTCGCCAACAACCCCGACCTTTTGCACCACAT
GACCAATCAGTTCCATCCTGTCCTCTTTCACCGCGCGGGCGTTCCCGTAT
TCAAGGCAAGGCAAGAGCCAGGGGAATTCATCGTCACTTTTCCCAAGTCC
TTTCACGCGGGATTCAACTACGGATTTAATGTTGCGGAAGCTGTGAATTT
CTCTCCTCCTCTCTGGTTGCCTTTGGGACGGGAGGCGATGGAGCGATATC
GTCGGTTTGCACGCGAATCCGTCGTCTCCCACGACCGACTGGTCTTGACC
TTGGCGCACAATTTGTGCCCTGAGTGGTCGATTCCGTCCCTCCAAGCCTT
GCTGCACGATCTGACGCTGATTGTCAAAGAGGAAGAGTTTTGGAGGAGCC
AATTGACGCGGCAAGGGTTGCGAGTCGACATCGTCCCGCCATCCAAGCTG
CTGCCCAACAATTTGAAGGAAATGGACGATGCCTCTCTCGACTATGACGA
GAAGCGGGTCTGTTTAAGCTGTAAGCATGTGTGCTTCCTGTCGGCTGTGG
CATGCGAATGCAGTGAATCTAAAGTGGTATGTCTGAGGGAAGTGCCTTTG
CTCTGTAAGTGCCGTATGGATCAGAGATATTTGATGGCCTGGCACAGCAT
AAGTGACCTCTGGGACATGGTCAGACGCGTGGAGGAGTATTTGAAAGCCA
GATTGGGGGAGATGGGGAAAAGGGATGGTCAAAAGGAGGAGGAGGAGGGA
GGCGGTTCGACGACAAGCGATGGAGAGGAGTCAGGGGAAACGCTGTGAAT
GTCGAGCGTGAAAGTGGAGGCCCCGGAGACCTCCTATGACGGGTACCGCG
AGAGTTACCATCCTCCTCAAGATATCGACTGTCACCGACACAAGAACACC
AGCCTCGACAAGATGGACGACAAGGAGAGCAGTGCCAAGCGTATCAATGG
GTTGGGATCAGAAGTCATGGAATACGGAATCCAAGTAGTGAAAGGGAAGG
ATGAGGGAAGCAGGGGGGTCTCCACCTCGGCAGCCTCAGCGACCCCAGTG
CCTAGTGCCAGCGCTACTGCCGCAACTCAGCTCTCGGATGCGACAAGTGC
AAACAGTACCGACTCAAATATCGTCAGCAGAAGGAAGCAGGAGCCGGCCG
GAACGACGCCGGCACAGGCCAGAGGAAACAACAAACGCAACCTGCCTTCT
GTCTCATCTGCCGGGGGGGTTGCCAGAGAAAATGGAGGCAAGCGTTCTCG
ACGACCGCCGCCAAGATTTGGGGAGACCGCTGGATTGGATAGGCGGGAAG
AGTCCATTTTGCGACAGGCCATTGAGAACTCCAAAATAGAGACGCATTTG
TGCGATACTGTCGAGATTGGGGAGGTGCCGGTCTTCCG back to top
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