|
|
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100035g10.3387.mrna |
| Orig protein id | gnl|cribi|Naga_100035g10.3387 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002456.1 | supercontig | CM002456.1:335561..337898 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna751 ID=rna751|Name=rna751|organism=Nannochloropsis gaditana|type=mRNA|length=1543bp
TCGCTGAATCGCTGTTCTACTAGTAGTTGGCTTCGCGCCTAAATGTAGAA
TGAATTCTCAAGACATATAGCCATTCGCCACAGGGATTGTCGCGCAATGG
GTAAGACCACAACGAAACGGTCGATGACCTCTAAGGTCGGCAAGCCATCT
AGCAGCACTAGAAGTAGCAAAGAGTTGATGATTCCGTCATCCGAAACTGT
AGAGCTTCAGGACTTGAGCACCCTTGCCAAGCAGATGGAGGAGCAATTGA
TGCAAGAATTCGAGGTATTGCTCTCAGCCCGTCGTAAAAAAGAGAATTCC
GGAGCAGTTGGAAACTCTCTAAATGCAGGCATTACTGGCAATAGAGGCGA
TAAGGACCAGGACGCGCGCGACGCCTTGTATTGGAAGCACATGTACGAGC
GCCTACGAGACTTGCGGGAAACAGACGCGGAAAGGCTCTTGCGCGAAAGT
GTACAGCATGCAGATGAAAGAGAAAGATCCTTGTTGGATTTAATATCCCA
CCTCGAGGAGGGCGGTGCGACGGATGGAGCAAGACGCTCCCGCAGCAAGT
CAGGTAAAATGGACGTCCGTTTGAGTGACGTATCCCTGTGTGAGTTTTCG
GGCCGAGACACGCGTAGCACAGCCATGGAGGTAGGCGGACAAAGCGAAGC
CAAAGCTGTCGGCCACCAGGATACCAGGGAGCTACAGGCACAGATCGCGA
CCCTGCAAGGAAAGCTGTCCGACTTGAAGCGAATTCTCATTGCTTACCAG
CGATTCACGTCCCTATGCATAAGCATGGAACGAGAGGCGTCGGCTCCGGG
AGGCATGAGCAAATTAAGCTGCACCGCCATCAATCACGTGCACAAGAAAG
CAGTCAAATTTTCCTTGAAGATGAACGTCGATGTGGAAGACAGTTCAAAT
ATGGATGCGACCTTTCGGCCAGAGGCAAACAAGGAACTCTTTCCCCCTTT
CCTGCAGCAGGAGGCGACTCTTGAGACGAAGCAGTGCCCGCTTCTCCTTT
TGTCCATTCTTAAAACGTTGTTTGACGAGAAGAAAAATGGGGCTGGAAAG
GAATAAGAATACATCAAGCAGACAGAGTGGAAGTGGTAGAGAGCAAGAGC
TCAAGGCGTTGTAAGTAAGGGACCGACTTTATAGTAGCGAGAGTTACAGG
TGCATTTGATGGGAGAAGAATCGAAGAAATTGACTGGATCCGTACCAGGT
GTTCTCTTTTGTTGAGGAAGCGCGTGCTGTCGAAGCAGGTAAATGGTGGG
AGTGGCGGTCCAAGAGGGGGATTCATCTCCGCGGTGTGGAGACGATGGAA
TTATAAATCCTGTCCTTGTCCGCTCCCTCTCACACCTTGAACCTTCTATG
GAAGGACTTGAAATGGTGGTGAAGAGTCAGGGACCTCATGGGTCCTTGAC
AATATTTGAAGCGACAATGGTTTTTAAAATGACAGAACGCACTCAAGTCC
TGGGTACCGATTCTGATGAAGAGATGTGATAAAGACGTGCGCGCGGTGAG
AGAAGCGATGACAAAAGCATGATATATTCGGCGTGGGAGACTT back to topprotein sequence of rna751 >rna751-protein ID=rna751-protein|Name=rna751|organism=Nannochloropsis gaditana|type=polypeptide|length=232bp
MRPEEEKEKIKRGKDAPGRDLYHLSGSVLCKGERIAEIRVNLGPTRKVQQ
QISGILRSDVTKRQIDGDGKGASRLSPPRHAVKAASLVEEPARVEKASCT
ALRAPLNAVPVGTPIPRQSKISRLFRSMMRGGIWGKMNPITCLSSPGNAK
PSLVSFPSASVSMYSTSCDGSLNKPVHDANLSLEAQAAYFSLKSASNMRL
SPRPYSPFRDQIVVTVVNRQGLTVTGSMEAGI back to topmRNA from alignment at CM002456.1:335561..337898+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna751 ID=rna751|Name=rna751|organism=Nannochloropsis gaditana|type=mRNA|length=2338bp|location=Sequence derived from alignment at CM002456.1:335561..337898+ (Nannochloropsis gaditana)
GATTTGTCTTCGAGCGCAATGATgaatttcattttttttcacgGTTAAGA
CGTCATTTAAAACAACAAAGGGCAGTGTTGTGTCAGATTCATGCAGTGGT
CTGGGGCTACTTGCAGTCATTATGGTAAGTGTCTTGAGGATCCCTTTCGG
GCCCCGGACTCTTTATAAGTGCTGGCTCTCTACAGAGCTAAACCCAAATA
CAAATATAAATATATAGATTTCTAAGTATTTCGAGATataaaaaaagggg
ggggacaaccACCACATCGGTATGTGTAGCTCGTCGGTTTGGTGGAGCAA
CATGGGCTCTTGGTACTTAGCCGAATAAAGACGTGGATTCGCCGTCCTCG
AAATTCATTGCTTTCCGTATCAATTTTCTGATCTCATGTTCTCGATATTC
ATTACAAGGGAGTAGGTGAGGTGGAAGCATGCGACAAGGACGATACACAT
GTCGGCGACACTGGAAGCTCTTGGAGGCAAAAGACTCGGATGCACTCTTT
ACGTCAGTTTTTCTCTATTAGCGACGCTGCACATGGAGCTACAAAAGATT
TTTCGTCATGTCGATCTGCCTCAATGTCTTTCTCTAtttctcctccgtct
tcagCAACTACCCAGTCTatgtcctcgtccacccctttgacctctacctc
ctccttcgtcctttcctcctcctgtcgctcTCAAGCGCCACCTTAATTGC
CCCTGGTCTCATTTGACCATACAAGGGATGAGGACAACATCAAAAGCTCG
GTTATTAGAAGTTGTGGCTGCGAAGAGGTTGCGTGTTCAAACCGCGTGGA
TGACTCCATATCCAGATGGAGAAACGCGTCGTCGTCCTTTATTTCCACCT
TCAAAAAGCGAGGATACCAAGCCGAAGAAGACCATTATCGGCATTGGCAT
TAAACATGTAGAAAGATTAGAAAGGAGGTGAAAGGGATGGTGAAGTTGAA
AGTACAGGGTTCCGGTTTCTGAAAAGTTTTAACAAGAGACTGAGATCGCC
TACACCATCGACGGTCGGGTATGAGCCAGTTGTAAAACACACCAGCGCCT
TATTCATGCGTAAACagcaaaaggaagaaggaatgCACACTTGGTGGTGG
ACGACAGAATGAGgcctgaggaggaaaaagaaaagataaagagaggaaag
gatgcgcCGGGTCGAGACCTCTATCACCTCTCTGGCTCGGTCTTATGCAA
AGGGGAAAGAATCGCAGAGATTAGGGTAAATTTAGGTCCAACGAGGAAAG
TACAGCAACAAATATCAGGAATCCTGCGCTCTGATGTCACAAAGCGGCAA
ATCGACGGCGATGGGAAAGGGGCTTCGAgactgtctcctcctcgccatgc
AGTCAAGGCGGCATCCCTGGTAGAGGAACCGGCGCGAGTTGAAAAGGCCT
CGTGTACCGCTTTACGTGCACCACTTAATGCTGTGCCTGTTGGTACACCC
ATTCCAAGGCAATCCAAGATTTCAAGGCTGTTCAGAAGCATGATGCGAGG
CGGTATCTGGGGCAAAATGAATCCTATCACGTGTCTTTCGTCTCCCGGAA
ATGCCAAACCGTCCTTggtttccttcccgtctGCTTCTGTATCGATGTAT
TCCACCAGCTGCGACGGATCTCTGAATAAGCCCGTGCACGATGCAAACTT
GTCACTAGAAGCTCAAGCGGCCTATTTCTCCCTGAAATCGGCAAGTAACA
TGCGGCTGTCGCCCCGGCCCTACAGCCCTTTTCGGGATCAAATAGTGGTC
ACAGTAGTCAATCGGCAAGGCTTGACAGTGACTGGTTCGATGGAGGCAGG
CATATGACGGACGACAGTTGTCGTCTTGGGTGTATTGTTTCTGAGCGTGT
GCCTCTGCCTTGGGGCACTCGTCTCCGGTCTAGTTCGCCAAGATCTCGGG
AGAGAGATATGTTGGGAGTGCTTTCAGCATTGAACACGCGTGAATTAAGA
AATTAAATGTTGAAGGCTGGATTTGATCGCGGAGAAACTCTCTCCCTGAG
TTCATGAGGTATCCTGTCCTCTGTCCTTCGCGTTCTTGTGCGAAACGAGC
GACGAAACCTGAGATTGTGATCCATGGGGGGCCTGAGAGTATCTCACACA
ACGAAAAATAGACGCCGACGGAAGTGGAGATGGTGTGCGCCTTACTGGCG
AATGGCGCGGGCGCCGGGAGCAGTGTCACATGGCAAGGAAGTAAGAAGCT
GAAAGTGGGATAAAACAGAACTAATGGATCCTGTGTTCTAGGACTCACTT
CTTTCGTCCACGTTCCTGAATGAACTCTCTCTTGGAAATTCCACGCAGTC
TCAAAATGTTCACTAAAACATAAGACGTACCATTTGCT back to topCoding sequence (CDS) from alignment at CM002456.1:335561..337898+ >rna751 ID=rna751|Name=rna751|organism=Nannochloropsis gaditana|type=CDS|length=699bp|location=Sequence derived from alignment at CM002456.1:335561..337898+ (Nannochloropsis gaditana)
ATGAGgcctgaggaggaaaaagaaaagataaagagaggaaaggatgcgcC
GGGTCGAGACCTCTATCACCTCTCTGGCTCGGTCTTATGCAAAGGGGAAA
GAATCGCAGAGATTAGGGTAAATTTAGGTCCAACGAGGAAAGTACAGCAA
CAAATATCAGGAATCCTGCGCTCTGATGTCACAAAGCGGCAAATCGACGG
CGATGGGAAAGGGGCTTCGAgactgtctcctcctcgccatgcAGTCAAGG
CGGCATCCCTGGTAGAGGAACCGGCGCGAGTTGAAAAGGCCTCGTGTACC
GCTTTACGTGCACCACTTAATGCTGTGCCTGTTGGTACACCCATTCCAAG
GCAATCCAAGATTTCAAGGCTGTTCAGAAGCATGATGCGAGGCGGTATCT
GGGGCAAAATGAATCCTATCACGTGTCTTTCGTCTCCCGGAAATGCCAAA
CCGTCCTTggtttccttcccgtctGCTTCTGTATCGATGTATTCCACCAG
CTGCGACGGATCTCTGAATAAGCCCGTGCACGATGCAAACTTGTCACTAG
AAGCTCAAGCGGCCTATTTCTCCCTGAAATCGGCAAGTAACATGCGGCTG
TCGCCCCGGCCCTACAGCCCTTTTCGGGATCAAATAGTGGTCACAGTAGT
CAATCGGCAAGGCTTGACAGTGACTGGTTCGATGGAGGCAGGCATATGA back to top
|