rna744, rna744 (mRNA) Nannochloropsis gaditana

Overview
Namerna744
Unique Namerna744
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1119
Alignment locationCM002456.1:316838..317790 +

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100035g1.3367.mrna
Orig protein idgnl|cribi|Naga_100035g1.3367
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002456.1supercontigCM002456.1:316838..317790 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100035g1gene714Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna744rna744-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM29903.1cds744Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna744 ID=rna744|Name=rna744|organism=Nannochloropsis gaditana|type=mRNA|length=1119bp
GGTCACCGCCACTTGATTAGGCAGCAGCCGGGTGCCGTGGCGCGTGCATG
GCGACTCTGAGGCGGTCTATGGCTTGGACATCGTCATGCATGAGGTCGGT
CGAGCGTGGTGAGTCATCGGACAAGGAAACGGCCAAACAGTCGCCGCGCA
CACGATTCTCGCGTCTATCGATCCATCCACCCACGGATCCCGGAAAGCCT
ACCAGACGGAACGGGAACACAAGCCGCGGCCCATACCCCCCACAATGCCG
GGCCATGGCAGGGCGACGGCGGCCATCGAAGACCCTTCCCCGCAGCACAG
AGAAGCCTCCTCCATGTGATACAGAGGCTGACAGGTCCTTCGCCTGCGTG
ATGAGTGGCTTCTGTTCCACCCTGGGGACAACACGTGAGGAGGGTTTACT
GCGCAAGCTCCCCAATCCAAAGCCCTCCGCCATACCCCGTAGAATACCTG
CGAGGGTCAGGCTCTACCTACTTTATGCGTCGTTTAAACTCTCCTGGGTT
GTCACGACATGGAAAATGGCCATTCGTTGGAAGACATGAACGCACTCCCA
GGTGAGGATGATGTTGGAAGCGAGGGTCAGGACAAAAAATGCTTCCTGTA
GGTATGTGGATCGGGGTGCCTCCTCCCAGCTTGTCAATCCTTGCCAGGAG
GACAGTTGATCTTCCTCTAGAAGTCAAGGAAGATGGCACCCCTTGTACTC
TACCGTGCGATTGCTGAAGATCCGTCGCTCAACTTGTCATGAGCTTGCAT
GTGCACAAAAAATCATGACTCTGCCAGGTCTTGGCCTAGGTCGGGGACTA
AGATTTTCCTCCGGGTCTCATGATCGTGTTGAGCGTCAAAAGGGACAATT
TCCGACCCGAACTGCGGGGCCATAGGATGTTCACGGGTGGAAAGCAGAAC
AAGTGCAGTTTGTTTTTCATGTGATGCCATAAAGTGTAATGAGCGGGCAT
GAAAACGGTGAAGTTGTACATGAAACATCCTAGACGAGAAAAATACGATA
CTTTCAACGACTAAGGTATTGGAGAAGGGGTCTCCCTCGGCACGGAAGCC
CCAGGCCCGGCGATGGGGAAGAAAAAAAGACGAGCAGCTGTTTGCCTCAA
CGGAATGTGAACACGAGCG
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protein sequence of rna744

>rna744-protein ID=rna744-protein|Name=rna744|organism=Nannochloropsis gaditana|type=polypeptide|length=307bp
MKEEVLSLKEYLKKHERESPPPPAVRPDPHLVSALVRELGVPGLEEAVNS
LAVQLNFDWARTCRYAFAAYLFARFGAQGVWKPLLYSMVPGVFFLQLRPF
RYGAKAVWEMLAVSPWIGGFSSALLSAPQQVLLTFDEQAYLERLYGQEGG
MVPPAVGPFLSPPEQGQGREQGGEKGLGEEAGGSEEEEQDGEEGVVEEGG
EEDELETLEDPFDDEEGGKDEVVGGEEGGEEREGQIREEEEREGEEEDVE
EGEEGEEGQEEGEEEEEEEEEEEEEEEEEDDFYEAADEIPGGEDFADEGE
EENEDDD
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mRNA from alignment at CM002456.1:316838..317790+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna744 ID=rna744|Name=rna744|organism=Nannochloropsis gaditana|type=mRNA|length=953bp|location=Sequence derived from alignment at CM002456.1:316838..317790+ (Nannochloropsis gaditana)
aggaggaggaggccccCAAGACCCAGAggatgaaggaagaggtgttGAGC
CTGAAGGAGTATTTGAAAAAGCACGAGCGTgagtccccgcccccgccggc
cgTCCGTCCCGATCCTCACCTGGTCAGTGCTCTGGTCCGGGAGCTGGGGG
TCCccggcctggaggaggcggtgaacAGCTTGGCCGTGCAATTGAACTTC
GATTGGGCCCGTACCTGCAGGTATGCCTTTGCGGCGTACTTGTTCGCGCG
CTTTGGCGCACAAGGTGTGTGGAAGCCCTTGCTATACAGCATGGTCCCGG
GTGTCTTTTTTTTGCAACTGCGGCCGTTTCGATACGGTGCCAAAGCGGTG
TGGGAGATGCTGGCGGTCTCGCCATGGATTGGAGGCTTCTCCTCTGCCTT
GCTCTCAGCACCACAGCAAGTCTTGTTGACGTTCGATGAGCAGGCGTACC
TGGAAAGACTTTACGGACAGGAAGGTGGCATGGTTCCCCCGGCCGTGGGT
CCCTTCTTGTCTCCCCCTGAACAGGGACAGGGGCGTGagcaagggggaga
aaagggcctgggtgaagaagcaggaggaagtgaagaggaggagcaggacg
gggaggagggagtggtggaagaaggaggggaggaggatgagctgGAGACA
CTAGAGGACCCGtttgatgatgaggagggagggaaagatgaagtggttgg
aggagaggaggggggggaggagcgggaaggtcagataagggaggaagagg
agagagagggagaggaggaggacgtggaagagggggaggagggggaggag
gggcaggaggagggggaggaagaagaggaggaagaagaggaggaggaaga
ggaggaagaggaggaggatgatttTTATGAGGCAGCGGACGAAATTcccg
gaggggaggactttgctgacgagggagaggaggaaaatgaagatGACGAC
TAG
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Coding sequence (CDS) from alignment at CM002456.1:316838..317790+

>rna744 ID=rna744|Name=rna744|organism=Nannochloropsis gaditana|type=CDS|length=924bp|location=Sequence derived from alignment at CM002456.1:316838..317790+ (Nannochloropsis gaditana)
atgaaggaagaggtgttGAGCCTGAAGGAGTATTTGAAAAAGCACGAGCG
TgagtccccgcccccgccggccgTCCGTCCCGATCCTCACCTGGTCAGTG
CTCTGGTCCGGGAGCTGGGGGTCCccggcctggaggaggcggtgaacAGC
TTGGCCGTGCAATTGAACTTCGATTGGGCCCGTACCTGCAGGTATGCCTT
TGCGGCGTACTTGTTCGCGCGCTTTGGCGCACAAGGTGTGTGGAAGCCCT
TGCTATACAGCATGGTCCCGGGTGTCTTTTTTTTGCAACTGCGGCCGTTT
CGATACGGTGCCAAAGCGGTGTGGGAGATGCTGGCGGTCTCGCCATGGAT
TGGAGGCTTCTCCTCTGCCTTGCTCTCAGCACCACAGCAAGTCTTGTTGA
CGTTCGATGAGCAGGCGTACCTGGAAAGACTTTACGGACAGGAAGGTGGC
ATGGTTCCCCCGGCCGTGGGTCCCTTCTTGTCTCCCCCTGAACAGGGACA
GGGGCGTGagcaagggggagaaaagggcctgggtgaagaagcaggaggaa
gtgaagaggaggagcaggacggggaggagggagtggtggaagaaggaggg
gaggaggatgagctgGAGACACTAGAGGACCCGtttgatgatgaggaggg
agggaaagatgaagtggttggaggagaggaggggggggaggagcgggaag
gtcagataagggaggaagaggagagagagggagaggaggaggacgtggaa
gagggggaggagggggaggaggggcaggaggagggggaggaagaagagga
ggaagaagaggaggaggaagaggaggaagaggaggaggatgatttTTATG
AGGCAGCGGACGAAATTcccggaggggaggactttgctgacgagggagag
gaggaaaatgaagatGACGACTAG
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Synonyms
Publications