rna731, rna731 (mRNA) Nannochloropsis gaditana

Overview
Namerna731
Unique Namerna731
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1043
Alignment locationCM002456.1:279304..280631 +

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100510g1.4377.mrna
Orig protein idgnl|cribi|Naga_100510g1.4377
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002456.1supercontigCM002456.1:279304..280631 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100510g1gene700Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna731rna731-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM29938.1cds731Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna731 ID=rna731|Name=rna731|organism=Nannochloropsis gaditana|type=mRNA|length=1043bp
AGGCAGCCATCCGCCATGAAAGATGGCAGGACTACCATCGGGCCGTAATC
AAGAGGCCGCTGGGCTTACCATGGCATTCAGCGGAAAACAGCGCCCGCGG
ATAAGATCATCCTTTCCCGGATTGTGCCCCTCACCTTCCCTCCCCTCTCC
GACCGCCCGCACTCTCTCCTTGCTTCCCTTTGGCCGTTGTATAGTCACCA
CATTCACCATCTTGTTTTTCTCCTCGTTGTCTGCTGCATTTCACCTCTCT
TCGCCGCCACTCTCCTTGCGGCATCACCTCGGTCTACCTCCATTCTCCTT
CTCTCCTTCCCTTTACATCACTGGATGCCCCCGCCCTTCTCCTTCCGCCC
ACAAGCCCCGCCGTTACCTTCTCACGCGCACTGCCCTCAGTCCTGATCAC
CCTCCCCGTACCTCTTCCTCTTCTCCTCCTCCTTCCTTCCCCATCACCAA
GCTCACTCGCCTCGTCGAAAAGCTCGAAGAGGCCGACATCGGTCTCGTCC
CCACCACCGCATTTCTGATGCAGGCCGCCCTCATTGGACTGGCCACGGGC
CTGAGCATTATCACGTTCAAGACCCTCATTAGCGTGATGGAAACGTACAC
CTATGGAAATTTCCTGACCTCTGCCCTGAATGCCTTCGGTTCGGGGAAAC
CGCTGTCCTTGGCCATGGCCGCCATTCCCGCCTTGGGTGGGGTTTGCGTG
GGTGTGATTCGGGAAGCCGCGCGTGAGTTCCCACCAGGCTTGAGCGGCCA
AGCCGAAGAGGTGGATAAACAGAAGCCCTTGGATGTGAAACGGGCCGTCC
TGAAGTCCTTGGCGGCCGTGGCGACCCTGGGGACCGGGTGCTCCCTCGGG
CCCGAAGGTCCCGCCGTGGAACTCGGCGTGGTGGCCTCCCGACTGGTCAC
GCTCAAGGCGAGCCTGGAGCAACGGAAGCAGTTGCTCCTGGCCGGGGCCG
CCGCGGGGGTGGCGGCGGGCTTCAATGCCCCTATTGCCGGGGTTTTCTTT
GCCTTGGAAATTGCCTCTGCCCAAGGTGGAGGGGAGGGTGGGG
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protein sequence of rna731

>rna731-protein ID=rna731-protein|Name=rna731|organism=Nannochloropsis gaditana|type=polypeptide|length=349bp
MGSLLVELVERKRKVDEVSARKGGREEGGEGGREGGWGDRERGREWQGSL
PGEGGWEGGQGLEEGVVLAGVAMAGGGRAEQYIYTLETQDVLAAPPIILG
PETGLEDTVLRLCAAKAEVVVVMEGGKKGGDEGSLVGLAVLRDLVSALEL
WCDDRRAEASAPAPGSLPPGRFPPLSEQGEFPGKTTGRSGLPSWSVDKEM
PAPDKEGKTDPEVATTSLTQAVGMGSVVQRALALAAVIREMEWSTGLRLR
DVVPAIKETEILWFGEEAFRARDLLTTRGLGVVPVVRERVVGGEGGGKGG
VEVMGVVDLGSIRAAVARKEAVEMVSRSLLDGAPHVSPSTMGREGGGSP
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mRNA from alignment at CM002456.1:279304..280631+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna731 ID=rna731|Name=rna731|organism=Nannochloropsis gaditana|type=mRNA|length=1328bp|location=Sequence derived from alignment at CM002456.1:279304..280631+ (Nannochloropsis gaditana)
ATGGGCTCCCTTCTGGTTGAGCTGGTGGAGCGGAAGCGcaaggtggacga
ggtgTCGGcacggaaaggagggagggaggaaggcggggagggagggaggg
agggggggtggggggaccgggagcggggaagggagtggcAGGGCAGCCtg
ccgggggaaggagggtgggagggagggcaaggcttggaggaaggagtcgT
TTTGGCCGGCGTGGCcatggcggggggagggagagcggagCAATACATAT
ACACATTGGAGACCCAAGATGTCTTGGCAGCTCCCCCGATAATATTGGGG
CCCGAAACCGGATTGGAGGACACCGTTTTACGGCTGTgcgccgccaaggc
cgaggtggtggtggtgatggagggcgggaaaaaggggggggatgaaggaA
GCCTGGTGGGGCTGGCGGTGTTGAGAGACCTGGTGAGTGCCTTAGAGCTG
TGGTGCGACGACCGACGGGCAGaagcctccgcccccgcccccggctccCT
ACCTCCGGGTCGGTTTCCACCTCTGTCTGAGCAGGGTGAGTTCCCCGGCA
AGACGACGGGCAGGAGCGGTTTGCCTTCGTGGAGTGTGGACAAAGAGATG
CCTGCGCccgacaaggaaggaaaaaccGACCCGGAGGTAGCAACCACCAG
CTTGACACAGGCCGTGGGCATGGGCAGCGTCGTCCAACGCGCCCTTGCCT
TGGCGGCGGTAATCCGGGAGATGGAGTGGTCGACGGGATTGAGACTCCGA
GACGTGGTTCCCGCTATCAAAGAGACGGAAATTTTGTGGTTTGGGGAAGA
AGCTTTCCGGGCACGGGACTTGCTGACCACGCGCGGGCTGGGGGTGGTCC
CAGTGGTGCGGGAGAGGgtggtcgggggggaaggcggggggaagggcggg
gtaGAGGTCATGGGCGTTGTGGACCTGGGGAGCATCAGGGCCGCCGTCGC
GAGGAAAGAAGCTGTGGAGATGGTCTCACGGAGCCTTTTGGACGGAGCCC
CGCATGTCTCCCCTTCaacgatggggagggagggaggcggttcTCCGTGA
GGAAAGCGGGGCATGAGGCTGCCGTGTGACGCGATTGGGTGTCTTGAGTA
GAGGACAATAGAGGAGGATacaggcggagggtgggagaagaaagggagga
ggagagaaatgTGCTTCTGAGAACGAAGCAATCGGACCGCCTGAGACAGT
AACTTGCCGACCAATTAAAACAAAACATGCCGCAGTACCATGCACGTCGC
TGCACCGTGCGCAGTAAGCGCGGACATCGATGTCGACTTGGACTTTGCAC
ACTCATACCCTATGCCTTCtcagcccgc
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Coding sequence (CDS) from alignment at CM002456.1:279304..280631+

>rna731 ID=rna731|Name=rna731|organism=Nannochloropsis gaditana|type=CDS|length=1050bp|location=Sequence derived from alignment at CM002456.1:279304..280631+ (Nannochloropsis gaditana)
ATGGGCTCCCTTCTGGTTGAGCTGGTGGAGCGGAAGCGcaaggtggacga
ggtgTCGGcacggaaaggagggagggaggaaggcggggagggagggaggg
agggggggtggggggaccgggagcggggaagggagtggcAGGGCAGCCtg
ccgggggaaggagggtgggagggagggcaaggcttggaggaaggagtcgT
TTTGGCCGGCGTGGCcatggcggggggagggagagcggagCAATACATAT
ACACATTGGAGACCCAAGATGTCTTGGCAGCTCCCCCGATAATATTGGGG
CCCGAAACCGGATTGGAGGACACCGTTTTACGGCTGTgcgccgccaaggc
cgaggtggtggtggtgatggagggcgggaaaaaggggggggatgaaggaA
GCCTGGTGGGGCTGGCGGTGTTGAGAGACCTGGTGAGTGCCTTAGAGCTG
TGGTGCGACGACCGACGGGCAGaagcctccgcccccgcccccggctccCT
ACCTCCGGGTCGGTTTCCACCTCTGTCTGAGCAGGGTGAGTTCCCCGGCA
AGACGACGGGCAGGAGCGGTTTGCCTTCGTGGAGTGTGGACAAAGAGATG
CCTGCGCccgacaaggaaggaaaaaccGACCCGGAGGTAGCAACCACCAG
CTTGACACAGGCCGTGGGCATGGGCAGCGTCGTCCAACGCGCCCTTGCCT
TGGCGGCGGTAATCCGGGAGATGGAGTGGTCGACGGGATTGAGACTCCGA
GACGTGGTTCCCGCTATCAAAGAGACGGAAATTTTGTGGTTTGGGGAAGA
AGCTTTCCGGGCACGGGACTTGCTGACCACGCGCGGGCTGGGGGTGGTCC
CAGTGGTGCGGGAGAGGgtggtcgggggggaaggcggggggaagggcggg
gtaGAGGTCATGGGCGTTGTGGACCTGGGGAGCATCAGGGCCGCCGTCGC
GAGGAAAGAAGCTGTGGAGATGGTCTCACGGAGCCTTTTGGACGGAGCCC
CGCATGTCTCCCCTTCaacgatggggagggagggaggcggttcTCCGTGA
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Synonyms
Publications