EWM29976.1, cds697 (CDS) Nannochloropsis gaditana

Overview
NameEWM29976.1
Unique Namecds697
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002456.1:190765..190814 +
Alignment locationCM002456.1:191000..191068 +
Alignment locationCM002456.1:191160..191235 +
Alignment locationCM002456.1:191495..191661 +
Alignment locationCM002456.1:191784..191964 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM29976.1
Productphosphoglycerate mutase family protein
Orig transcript idgnl|cribi|Naga_100383g1.7086.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002456.1supercontigCM002456.1:190765..190814 +
CM002456.1supercontigCM002456.1:191000..191068 +
CM002456.1supercontigCM002456.1:191160..191235 +
CM002456.1supercontigCM002456.1:191495..191661 +
CM002456.1supercontigCM002456.1:191784..191964 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
Vocabulary: INTERPRO
TermDefinition
IPR029033His_PPase_superfam
IPR013078His_Pase_superF_clade-1
Homology
BLAST of EWM29976.1 vs. NCBI_GenBank
Match: gi|585112579|gb|EWM29976.1| (phosphoglycerate mutase family protein [Nannochloropsis gaditana])

HSP 1 Score: 373.244 bits (957), Expect = 6.535e-131
Identity = 180/180 (100.00%), Postives = 180/180 (100.00%), Query Frame = 0
Query:    1 MQQAKKERCNFGRFYFRFPNGESGLDVYTRVTSFISTMFRDFADGHICRPDLNIVIVTHGLTLRLLLMRWFKLTVETFESTTNPPNGSFVVMTRKEGPRGGRSGGGVYEMAPESAALISLSCDSVPVGASIMTPCSNFEDNTGREQKNGGEERVMTPLSNAVERLSIDANGISEAEARPS 180
            MQQAKKERCNFGRFYFRFPNGESGLDVYTRVTSFISTMFRDFADGHICRPDLNIVIVTHGLTLRLLLMRWFKLTVETFESTTNPPNGSFVVMTRKEGPRGGRSGGGVYEMAPESAALISLSCDSVPVGASIMTPCSNFEDNTGREQKNGGEERVMTPLSNAVERLSIDANGISEAEARPS
Sbjct:    1 MQQAKKERCNFGRFYFRFPNGESGLDVYTRVTSFISTMFRDFADGHICRPDLNIVIVTHGLTLRLLLMRWFKLTVETFESTTNPPNGSFVVMTRKEGPRGGRSGGGVYEMAPESAALISLSCDSVPVGASIMTPCSNFEDNTGREQKNGGEERVMTPLSNAVERLSIDANGISEAEARPS 180          
BLAST of EWM29976.1 vs. NCBI_GenBank
Match: gi|298711614|emb|CBJ32671.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 147.902 bits (372), Expect = 3.917e-40
Identity = 66/93 (70.97%), Postives = 76/93 (81.72%), Query Frame = 0
Query:    4 AKKERCNFGRFYFRFPNGESGLDVYTRVTSFISTMFRDFADGHICRPDLNIVIVTHGLTLRLLLMRWFKLTVETFESTTNPPNGSFVVMTRKE 96
            +K ER  FGRFY+RFP GESGLDVY R TSFI+TMFRDFA+  I R DLN++IVTHGLTLRLL+MRWF+ ++  FE T NP NGSFVVM RKE
Sbjct:  224 SKAERARFGRFYYRFPQGESGLDVYNRATSFIATMFRDFANESIARDDLNVIIVTHGLTLRLLVMRWFQYSIADFEETLNPENGSFVVMERKE 316          
BLAST of EWM29976.1 vs. NCBI_GenBank
Match: gi|224009940|ref|XP_002293928.1| (hypothetical protein THAPSDRAFT_17193, partial [Thalassiosira pseudonana CCMP1335] >gi|220970600|gb|EED88937.1| hypothetical protein THAPSDRAFT_17193, partial [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 111.309 bits (277), Expect = 2.291e-27
Identity = 53/93 (56.99%), Postives = 66/93 (70.97%), Query Frame = 0
Query:    4 AKKERCNFGRFYFRFPNGESGLDVYTRVTSFISTMFRD----FADGHICRPDLNIVIVTHGLTLRLLLMRWFKLTVETFESTTNPPNGSFVVM 92
            AK ER  FGRF++RFP+GE+GLDVY+RV+SFI T+ RD      +GH    +LN+VIVTHGL LRL LMRWF+ +V  FE + NP N   V M
Sbjct:  109 AKAERSKFGRFFYRFPSGEAGLDVYSRVSSFIPTLVRDCDQYVREGHDL-DNLNLVIVTHGLALRLFLMRWFQFSVHDFEESQNPENCELVTM 200          
BLAST of EWM29976.1 vs. NCBI_GenBank
Match: gi|551642246|ref|XP_005823921.1| (hypothetical protein GUITHDRAFT_89880 [Guillardia theta CCMP2712] >gi|428167990|gb|EKX36941.1| hypothetical protein GUITHDRAFT_89880 [Guillardia theta CCMP2712])

HSP 1 Score: 115.161 bits (287), Expect = 3.809e-27
Identity = 59/119 (49.58%), Postives = 76/119 (63.87%), Query Frame = 0
Query:    1 MQQAKKERCNFGRFYFRFPNGESGLDVYTRVTSFISTMFRD-FADGHICRPDLNIVIVTHGLTLRLLLMRWFKLTVETFESTTNPPNGSFVVMTRKEGPRGGRSGGGVYEMAPESAALI 118
            ++Q K ER  FGRF++RFPNGE+GLDVY RV+ FI T+ RD   +G       N++I+THGL LRL LMRWF+ +VE FE+T NPPN    VM R   P  GR     Y +  E+  +I
Sbjct:  264 IRQNKHERSKFGRFFYRFPNGEAGLDVYIRVSGFIGTLRRDHLQEGS------NVIIITHGLALRLFLMRWFQWSVEQFEATHNPPNCGIAVMERL--PEDGR-----YRLTQETLDVI 369          
BLAST of EWM29976.1 vs. NCBI_GenBank
Match: gi|676387981|ref|XP_009037269.1| (hypothetical protein AURANDRAFT_13634, partial [Aureococcus anophagefferens] >gi|323452017|gb|EGB07892.1| hypothetical protein AURANDRAFT_13634, partial [Aureococcus anophagefferens])

HSP 1 Score: 110.153 bits (274), Expect = 5.515e-27
Identity = 49/94 (52.13%), Postives = 67/94 (71.28%), Query Frame = 0
Query:    1 MQQAKKERCNFGRFYFRFPNGESGLDVYTRVTSFISTMFRDFADGHICRPDLNIVIVTHGLTLRLLLMRWFKLTVETFESTTNPPNGSFVVMTR 94
            M++ K  R  FGRF++RFPNGESG DVY RV++++ T++R+   G I  PD  +++VTHGLT RL+LMRW+  +VE FE T NP N   +VM R
Sbjct:  110 MRECKVSRNEFGRFFYRFPNGESGADVYDRVSTWLETLYREMEFGLIT-PDTTLLLVTHGLTARLILMRWYHWSVEAFEETYNPGNAQLMVMER 202          
BLAST of EWM29976.1 vs. NCBI_GenBank
Match: gi|294870779|ref|XP_002765813.1| (phosphoglycerate mutase, putative [Perkinsus marinus ATCC 50983] >gi|239866089|gb|EEQ98530.1| phosphoglycerate mutase, putative [Perkinsus marinus ATCC 50983])

HSP 1 Score: 112.079 bits (279), Expect = 7.624e-27
Identity = 65/150 (43.33%), Postives = 87/150 (58.00%), Query Frame = 0
Query:    1 MQQAKKERCNFGRFYFRFPNGESGLDVYTRVTSFISTMFRDFAD-------------------GHICR-PDLNIVIVTHGLTLRLLLMRWFKLTVETFESTTNPPNGSFVVMTRKEGPRGGRSGGGVYEMAPESAALISLSCDSVPVGAS 130
            M + K+ER  FGRF++RFP+GESG DVY RVT+F+ +M R ++D                   GH+C   D ++VIVTHG+TLR+ LMRWF  TV+ FE T NP N   VV+ +K      R   G Y++  ES  L+ L+ D V   AS
Sbjct:   90 MLKCKQERERFGRFFYRFPHGESGADVYDRVTTFLESMKRHWSDPARRRSRAPRPRTRSDVFAGHLCYTEDSDVVIVTHGVTLRIFLMRWFNWTVDLFEETYNPHNCD-VVVRQKLKMVMVRDEEGHYQLTEESLNLLGLT-DRVLKNAS 237          
BLAST of EWM29976.1 vs. NCBI_GenBank
Match: gi|970057219|ref|XP_015055259.1| (PREDICTED: phosphoglycerate mutase-like protein AT74 [Solanum pennellii])

HSP 1 Score: 108.997 bits (271), Expect = 5.493e-26
Identity = 49/95 (51.58%), Postives = 66/95 (69.47%), Query Frame = 0
Query:    1 MQQAKKERCNFGRFYFRFPNGESGLDVYTRVTSFISTMFRDFADGHICRPD---LNIVIVTHGLTLRLLLMRWFKLTVETFESTTNPPNGSFVVM 92
            M++ KKER  +G+F++RFP+GES  DVY RV+ FI +M+RD     IC  D   LNIVI++HGLT+R+LLMR FK T E  ES  +P NG   ++
Sbjct:  119 MEEYKKERERYGKFFYRFPHGESAADVYDRVSGFIESMWRDIEMEEICESDSDNLNIVIISHGLTIRILLMRLFKWTAEQVESLISPENGEIRIL 213          
BLAST of EWM29976.1 vs. NCBI_GenBank
Match: gi|365982239|ref|XP_003667953.1| (hypothetical protein NDAI_0A05550 [Naumovozyma dairenensis CBS 421] >gi|343766719|emb|CCD22710.1| hypothetical protein NDAI_0A05550 [Naumovozyma dairenensis CBS 421])

HSP 1 Score: 110.538 bits (275), Expect = 6.099e-26
Identity = 51/96 (53.12%), Postives = 63/96 (65.62%), Query Frame = 0
Query:    1 MQQAKKERCNFGRFYFRFPNGESGLDVYTRVTSFISTMFRDFADGHICRPDLNIVIVTHGLTLRLLLMRWFKLTVETFESTTNPPNGSFVVMTRKE 96
            MQ   K+R  +G F+FRFP GES  DV+ RV SF  T+FR F D H  +P   IV+VTHG+  R+ LM+WF+ T E FES TN PNGS +VM   E
Sbjct:  215 MQDVMKKRATYGHFFFRFPQGESAADVFDRVASFQETLFRHFEDKHSRKPRDVIVLVTHGIYARVFLMKWFRWTYEEFESFTNVPNGSMMVMELDE 310          
BLAST of EWM29976.1 vs. NCBI_GenBank
Match: gi|460406773|ref|XP_004248834.1| (PREDICTED: phosphoglycerate mutase-like protein AT74 [Solanum lycopersicum])

HSP 1 Score: 108.612 bits (270), Expect = 6.376e-26
Identity = 49/95 (51.58%), Postives = 66/95 (69.47%), Query Frame = 0
Query:    1 MQQAKKERCNFGRFYFRFPNGESGLDVYTRVTSFISTMFRDFADGHICRPD---LNIVIVTHGLTLRLLLMRWFKLTVETFESTTNPPNGSFVVM 92
            M++ KKER  +G+F++RFP+GES  DVY RV+ FI +M+RD     IC  D   LNIVI++HGLT+R+LLMR FK T E  ES  +P NG   ++
Sbjct:  119 MEEYKKERERYGKFFYRFPHGESAADVYDRVSGFIESMWRDIEMEEICESDSDNLNIVIISHGLTIRILLMRLFKWTAEQVESLISPENGEIRIL 213          
BLAST of EWM29976.1 vs. NCBI_GenBank
Match: gi|551643822|ref|XP_005824704.1| (hypothetical protein GUITHDRAFT_158572 [Guillardia theta CCMP2712] >gi|428168783|gb|EKX37724.1| hypothetical protein GUITHDRAFT_158572 [Guillardia theta CCMP2712])

HSP 1 Score: 107.457 bits (267), Expect = 7.492e-26
Identity = 49/86 (56.98%), Postives = 63/86 (73.26%), Query Frame = 0
Query:    1 MQQAKKERCNFGRFYFRFPNGESGLDVYTRVTSFISTMFRDFADGHICRPDLNIVIVTHGLTLRLLLMRWFKLTVETFESTTNPPN 86
            ++++K ER  +GRF++RFP+GE+GLDVYTRVTSFI T+ RD  +      D  ++IVTHGL LRL LM WF+ TVE FE T NP N
Sbjct:  100 IKKSKDERHKYGRFFYRFPDGEAGLDVYTRVTSFIDTLRRDHTE-----EDCTVIIVTHGLALRLFLMAWFQWTVEEFEMTQNPNN 180          
The following BLAST results are available for this feature:
BLAST of EWM29976.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585112579|gb|EWM29976.1|6.535e-131100.00phosphoglycerate mutase family protein [Nannochlor... [more]
gi|298711614|emb|CBJ32671.1|3.917e-4070.97conserved unknown protein [Ectocarpus siliculosus][more]
gi|224009940|ref|XP_002293928.1|2.291e-2756.99hypothetical protein THAPSDRAFT_17193, partial [Th... [more]
gi|551642246|ref|XP_005823921.1|3.809e-2749.58hypothetical protein GUITHDRAFT_89880 [Guillardia ... [more]
gi|676387981|ref|XP_009037269.1|5.515e-2752.13hypothetical protein AURANDRAFT_13634, partial [Au... [more]
gi|294870779|ref|XP_002765813.1|7.624e-2743.33phosphoglycerate mutase, putative [Perkinsus marin... [more]
gi|970057219|ref|XP_015055259.1|5.493e-2651.58PREDICTED: phosphoglycerate mutase-like protein AT... [more]
gi|365982239|ref|XP_003667953.1|6.099e-2653.13hypothetical protein NDAI_0A05550 [Naumovozyma dai... [more]
gi|460406773|ref|XP_004248834.1|6.376e-2651.58PREDICTED: phosphoglycerate mutase-like protein AT... [more]
gi|551643822|ref|XP_005824704.1|7.492e-2656.98hypothetical protein GUITHDRAFT_158572 [Guillardia... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna697rna697Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications