EWM29976.1, cds697 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM29976.1 vs. NCBI_GenBank
Match: gi|585112579|gb|EWM29976.1| (phosphoglycerate mutase family protein [Nannochloropsis gaditana]) HSP 1 Score: 373.244 bits (957), Expect = 6.535e-131 Identity = 180/180 (100.00%), Postives = 180/180 (100.00%), Query Frame = 0 Query: 1 MQQAKKERCNFGRFYFRFPNGESGLDVYTRVTSFISTMFRDFADGHICRPDLNIVIVTHGLTLRLLLMRWFKLTVETFESTTNPPNGSFVVMTRKEGPRGGRSGGGVYEMAPESAALISLSCDSVPVGASIMTPCSNFEDNTGREQKNGGEERVMTPLSNAVERLSIDANGISEAEARPS 180 MQQAKKERCNFGRFYFRFPNGESGLDVYTRVTSFISTMFRDFADGHICRPDLNIVIVTHGLTLRLLLMRWFKLTVETFESTTNPPNGSFVVMTRKEGPRGGRSGGGVYEMAPESAALISLSCDSVPVGASIMTPCSNFEDNTGREQKNGGEERVMTPLSNAVERLSIDANGISEAEARPS Sbjct: 1 MQQAKKERCNFGRFYFRFPNGESGLDVYTRVTSFISTMFRDFADGHICRPDLNIVIVTHGLTLRLLLMRWFKLTVETFESTTNPPNGSFVVMTRKEGPRGGRSGGGVYEMAPESAALISLSCDSVPVGASIMTPCSNFEDNTGREQKNGGEERVMTPLSNAVERLSIDANGISEAEARPS 180
BLAST of EWM29976.1 vs. NCBI_GenBank
Match: gi|298711614|emb|CBJ32671.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 147.902 bits (372), Expect = 3.917e-40 Identity = 66/93 (70.97%), Postives = 76/93 (81.72%), Query Frame = 0 Query: 4 AKKERCNFGRFYFRFPNGESGLDVYTRVTSFISTMFRDFADGHICRPDLNIVIVTHGLTLRLLLMRWFKLTVETFESTTNPPNGSFVVMTRKE 96 +K ER FGRFY+RFP GESGLDVY R TSFI+TMFRDFA+ I R DLN++IVTHGLTLRLL+MRWF+ ++ FE T NP NGSFVVM RKE Sbjct: 224 SKAERARFGRFYYRFPQGESGLDVYNRATSFIATMFRDFANESIARDDLNVIIVTHGLTLRLLVMRWFQYSIADFEETLNPENGSFVVMERKE 316
BLAST of EWM29976.1 vs. NCBI_GenBank
Match: gi|224009940|ref|XP_002293928.1| (hypothetical protein THAPSDRAFT_17193, partial [Thalassiosira pseudonana CCMP1335] >gi|220970600|gb|EED88937.1| hypothetical protein THAPSDRAFT_17193, partial [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 111.309 bits (277), Expect = 2.291e-27 Identity = 53/93 (56.99%), Postives = 66/93 (70.97%), Query Frame = 0 Query: 4 AKKERCNFGRFYFRFPNGESGLDVYTRVTSFISTMFRD----FADGHICRPDLNIVIVTHGLTLRLLLMRWFKLTVETFESTTNPPNGSFVVM 92 AK ER FGRF++RFP+GE+GLDVY+RV+SFI T+ RD +GH +LN+VIVTHGL LRL LMRWF+ +V FE + NP N V M Sbjct: 109 AKAERSKFGRFFYRFPSGEAGLDVYSRVSSFIPTLVRDCDQYVREGHDL-DNLNLVIVTHGLALRLFLMRWFQFSVHDFEESQNPENCELVTM 200
BLAST of EWM29976.1 vs. NCBI_GenBank
Match: gi|551642246|ref|XP_005823921.1| (hypothetical protein GUITHDRAFT_89880 [Guillardia theta CCMP2712] >gi|428167990|gb|EKX36941.1| hypothetical protein GUITHDRAFT_89880 [Guillardia theta CCMP2712]) HSP 1 Score: 115.161 bits (287), Expect = 3.809e-27 Identity = 59/119 (49.58%), Postives = 76/119 (63.87%), Query Frame = 0 Query: 1 MQQAKKERCNFGRFYFRFPNGESGLDVYTRVTSFISTMFRD-FADGHICRPDLNIVIVTHGLTLRLLLMRWFKLTVETFESTTNPPNGSFVVMTRKEGPRGGRSGGGVYEMAPESAALI 118 ++Q K ER FGRF++RFPNGE+GLDVY RV+ FI T+ RD +G N++I+THGL LRL LMRWF+ +VE FE+T NPPN VM R P GR Y + E+ +I Sbjct: 264 IRQNKHERSKFGRFFYRFPNGEAGLDVYIRVSGFIGTLRRDHLQEGS------NVIIITHGLALRLFLMRWFQWSVEQFEATHNPPNCGIAVMERL--PEDGR-----YRLTQETLDVI 369
BLAST of EWM29976.1 vs. NCBI_GenBank
Match: gi|676387981|ref|XP_009037269.1| (hypothetical protein AURANDRAFT_13634, partial [Aureococcus anophagefferens] >gi|323452017|gb|EGB07892.1| hypothetical protein AURANDRAFT_13634, partial [Aureococcus anophagefferens]) HSP 1 Score: 110.153 bits (274), Expect = 5.515e-27 Identity = 49/94 (52.13%), Postives = 67/94 (71.28%), Query Frame = 0 Query: 1 MQQAKKERCNFGRFYFRFPNGESGLDVYTRVTSFISTMFRDFADGHICRPDLNIVIVTHGLTLRLLLMRWFKLTVETFESTTNPPNGSFVVMTR 94 M++ K R FGRF++RFPNGESG DVY RV++++ T++R+ G I PD +++VTHGLT RL+LMRW+ +VE FE T NP N +VM R Sbjct: 110 MRECKVSRNEFGRFFYRFPNGESGADVYDRVSTWLETLYREMEFGLIT-PDTTLLLVTHGLTARLILMRWYHWSVEAFEETYNPGNAQLMVMER 202
BLAST of EWM29976.1 vs. NCBI_GenBank
Match: gi|294870779|ref|XP_002765813.1| (phosphoglycerate mutase, putative [Perkinsus marinus ATCC 50983] >gi|239866089|gb|EEQ98530.1| phosphoglycerate mutase, putative [Perkinsus marinus ATCC 50983]) HSP 1 Score: 112.079 bits (279), Expect = 7.624e-27 Identity = 65/150 (43.33%), Postives = 87/150 (58.00%), Query Frame = 0 Query: 1 MQQAKKERCNFGRFYFRFPNGESGLDVYTRVTSFISTMFRDFAD-------------------GHICR-PDLNIVIVTHGLTLRLLLMRWFKLTVETFESTTNPPNGSFVVMTRKEGPRGGRSGGGVYEMAPESAALISLSCDSVPVGAS 130 M + K+ER FGRF++RFP+GESG DVY RVT+F+ +M R ++D GH+C D ++VIVTHG+TLR+ LMRWF TV+ FE T NP N VV+ +K R G Y++ ES L+ L+ D V AS Sbjct: 90 MLKCKQERERFGRFFYRFPHGESGADVYDRVTTFLESMKRHWSDPARRRSRAPRPRTRSDVFAGHLCYTEDSDVVIVTHGVTLRIFLMRWFNWTVDLFEETYNPHNCD-VVVRQKLKMVMVRDEEGHYQLTEESLNLLGLT-DRVLKNAS 237
BLAST of EWM29976.1 vs. NCBI_GenBank
Match: gi|970057219|ref|XP_015055259.1| (PREDICTED: phosphoglycerate mutase-like protein AT74 [Solanum pennellii]) HSP 1 Score: 108.997 bits (271), Expect = 5.493e-26 Identity = 49/95 (51.58%), Postives = 66/95 (69.47%), Query Frame = 0 Query: 1 MQQAKKERCNFGRFYFRFPNGESGLDVYTRVTSFISTMFRDFADGHICRPD---LNIVIVTHGLTLRLLLMRWFKLTVETFESTTNPPNGSFVVM 92 M++ KKER +G+F++RFP+GES DVY RV+ FI +M+RD IC D LNIVI++HGLT+R+LLMR FK T E ES +P NG ++ Sbjct: 119 MEEYKKERERYGKFFYRFPHGESAADVYDRVSGFIESMWRDIEMEEICESDSDNLNIVIISHGLTIRILLMRLFKWTAEQVESLISPENGEIRIL 213
BLAST of EWM29976.1 vs. NCBI_GenBank
Match: gi|365982239|ref|XP_003667953.1| (hypothetical protein NDAI_0A05550 [Naumovozyma dairenensis CBS 421] >gi|343766719|emb|CCD22710.1| hypothetical protein NDAI_0A05550 [Naumovozyma dairenensis CBS 421]) HSP 1 Score: 110.538 bits (275), Expect = 6.099e-26 Identity = 51/96 (53.12%), Postives = 63/96 (65.62%), Query Frame = 0 Query: 1 MQQAKKERCNFGRFYFRFPNGESGLDVYTRVTSFISTMFRDFADGHICRPDLNIVIVTHGLTLRLLLMRWFKLTVETFESTTNPPNGSFVVMTRKE 96 MQ K+R +G F+FRFP GES DV+ RV SF T+FR F D H +P IV+VTHG+ R+ LM+WF+ T E FES TN PNGS +VM E Sbjct: 215 MQDVMKKRATYGHFFFRFPQGESAADVFDRVASFQETLFRHFEDKHSRKPRDVIVLVTHGIYARVFLMKWFRWTYEEFESFTNVPNGSMMVMELDE 310
BLAST of EWM29976.1 vs. NCBI_GenBank
Match: gi|460406773|ref|XP_004248834.1| (PREDICTED: phosphoglycerate mutase-like protein AT74 [Solanum lycopersicum]) HSP 1 Score: 108.612 bits (270), Expect = 6.376e-26 Identity = 49/95 (51.58%), Postives = 66/95 (69.47%), Query Frame = 0 Query: 1 MQQAKKERCNFGRFYFRFPNGESGLDVYTRVTSFISTMFRDFADGHICRPD---LNIVIVTHGLTLRLLLMRWFKLTVETFESTTNPPNGSFVVM 92 M++ KKER +G+F++RFP+GES DVY RV+ FI +M+RD IC D LNIVI++HGLT+R+LLMR FK T E ES +P NG ++ Sbjct: 119 MEEYKKERERYGKFFYRFPHGESAADVYDRVSGFIESMWRDIEMEEICESDSDNLNIVIISHGLTIRILLMRLFKWTAEQVESLISPENGEIRIL 213
BLAST of EWM29976.1 vs. NCBI_GenBank
Match: gi|551643822|ref|XP_005824704.1| (hypothetical protein GUITHDRAFT_158572 [Guillardia theta CCMP2712] >gi|428168783|gb|EKX37724.1| hypothetical protein GUITHDRAFT_158572 [Guillardia theta CCMP2712]) HSP 1 Score: 107.457 bits (267), Expect = 7.492e-26 Identity = 49/86 (56.98%), Postives = 63/86 (73.26%), Query Frame = 0 Query: 1 MQQAKKERCNFGRFYFRFPNGESGLDVYTRVTSFISTMFRDFADGHICRPDLNIVIVTHGLTLRLLLMRWFKLTVETFESTTNPPN 86 ++++K ER +GRF++RFP+GE+GLDVYTRVTSFI T+ RD + D ++IVTHGL LRL LM WF+ TVE FE T NP N Sbjct: 100 IKKSKDERHKYGRFFYRFPDGEAGLDVYTRVTSFIDTLRRDHTE-----EDCTVIIVTHGLALRLFLMAWFQWTVEEFEMTQNPNN 180 The following BLAST results are available for this feature:
BLAST of EWM29976.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
|