EWM30030.1, cds649 (CDS) Nannochloropsis gaditana

Overview
NameEWM30030.1
Unique Namecds649
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002456.1:82960..83072 +
Alignment locationCM002456.1:83157..83258 +
Alignment locationCM002456.1:83531..83795 +
Alignment locationCM002456.1:83873..83890 +

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Properties
Property NameValue
Protein idEWM30030.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100346g1.7658.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002456.1supercontigCM002456.1:82960..83072 +
CM002456.1supercontigCM002456.1:83157..83258 +
CM002456.1supercontigCM002456.1:83531..83795 +
CM002456.1supercontigCM002456.1:83873..83890 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM30030.1 vs. NCBI_GenBank
Match: gi|585112656|gb|EWM30030.1| (hypothetical protein Naga_100346g1 [Nannochloropsis gaditana])

HSP 1 Score: 337.035 bits (863), Expect = 4.143e-117
Identity = 165/165 (100.00%), Postives = 165/165 (100.00%), Query Frame = 0 
Query:    1 MHGRHFFLQAYSSKGKMPAQFPPSLKRRMPGSLARVRRYLEESWGSLQPMDNPPGYDEALGVTAKEDKPRRWRSPLEHARTWQRAFKSWQNSFDYDKFTLEGGLGRGLVRGEAGDRADEALKNGWSPEAARVLVDGDEKEVESLVREKLRGCRTELTEEEDGSGK 165
            MHGRHFFLQAYSSKGKMPAQFPPSLKRRMPGSLARVRRYLEESWGSLQPMDNPPGYDEALGVTAKEDKPRRWRSPLEHARTWQRAFKSWQNSFDYDKFTLEGGLGRGLVRGEAGDRADEALKNGWSPEAARVLVDGDEKEVESLVREKLRGCRTELTEEEDGSGK
Sbjct:    1 MHGRHFFLQAYSSKGKMPAQFPPSLKRRMPGSLARVRRYLEESWGSLQPMDNPPGYDEALGVTAKEDKPRRWRSPLEHARTWQRAFKSWQNSFDYDKFTLEGGLGRGLVRGEAGDRADEALKNGWSPEAARVLVDGDEKEVESLVREKLRGCRTELTEEEDGSGK 165
The following BLAST results are available for this feature:
BLAST of EWM30030.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585112656|gb|EWM30030.1|4.143e-117100.00hypothetical protein Naga_100346g1 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna649rna649Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications