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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100346g1.7658.mrna |
| Orig protein id | gnl|cribi|Naga_100346g1.7658 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002456.1 | supercontig | CM002456.1:82960..83890 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna649 ID=rna649|Name=rna649|organism=Nannochloropsis gaditana|type=mRNA|length=840bp
ATGTCCTATTTGCTAACAGATTTCGTTGATTTCCTCGTTTCCTTACACGC
ACAGCAAACAGAACGGGCCCTCCCGATCTCCGCTTCCTGTGATACTGGGT
TAGGTAGCTCCATTTCACATCTTTGCCACCAAAAAGGATGTTGGCTTATG
AAAGAAATGAGTTCTTCTTTTCAAAGCCAAACTCCGTCTGAAATGGCAGG
GGAGAGAATTTTGTCGGCGTCGGGTAGGTGGATGGGAAAGGAAAAGCACC
CTACCTGGGGTGAGAACGAAATTGACCGAGATCGGGAGGAACTGCCGCTG
CTGGGTATGCCAACCAACGAAACAGATGACGCCACACTCGTTGCATTCAT
GGCTGGACTCCAGCGGGAGGCAGATACGCTCAATGACACGAGGGACCCAA
CGTTGTGGAAACCAGCGGCCCGCTCCTCTCCATCCTCCCAACGACGGCGT
AGCTACCATTTGCATGCACTCGAGTCCTTGCTGGAGTCAGGTCAAGGGGC
AGACGTGGAGCTCCACCCGGCTGTGCCTCCGTCTTTTTCCCCTGAGGCCG
TCTCTACGAGCGCCCTGGCTTTCCCGCCCCCCTTGGCCTTGCATGCCCGC
ATTCTCCGTCACGCGTCGCGGATTTTCCGGCCTCACGCACGGCTCCAAGT
CCCTTGGTCGGCCCCTGTCACCCACGCGCTGGCAACATTTATGTACACGG
GGAGACTAACGCTGTCCACTGCCCTTCTTGCCGACGTCTATTTGGCGGCT
AGGGAGGCAGGGGCCCGGCCCTTGCTTTACTTGCTGCGCACGTACCCCTA
CTATGCCTTGCGTCTGACAAGTGGGGAGAAAGCGAGGTGA back to topprotein sequence of rna649 >rna649-protein ID=rna649-protein|Name=rna649|organism=Nannochloropsis gaditana|type=polypeptide|length=165bp
MHGRHFFLQAYSSKGKMPAQFPPSLKRRMPGSLARVRRYLEESWGSLQPM
DNPPGYDEALGVTAKEDKPRRWRSPLEHARTWQRAFKSWQNSFDYDKFTL
EGGLGRGLVRGEAGDRADEALKNGWSPEAARVLVDGDEKEVESLVREKLR
GCRTELTEEEDGSGK back to topmRNA from alignment at CM002456.1:82960..83890+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna649 ID=rna649|Name=rna649|organism=Nannochloropsis gaditana|type=mRNA|length=931bp|location=Sequence derived from alignment at CM002456.1:82960..83890+ (Nannochloropsis gaditana)
ATGCACGGACGACACTTCTTCCTACAGGCCTACTCAAGCAAAGGAAAGAT
GCCAGCACAATTCCCACCCTCGTTAAAGCGCCGGATGCCTGGGTCTTTGG
CCCGTGTTCGACGGTAGGGGACTGAATGCTCTCAGATGTGCCTAGGCCTC
AGCACTTGCTGTGGTTCACCACTCgttattttcctcccctctccaagATA
CCTCGAAGAATCATGGGGAAGCCTCCAGCCAATGGACAATCCCCCAGGGT
ACGACGAAGCGCTAGGTGTCACAGCCAAAGAGGATAAGCCAAGGCGCTGG
TGAGTATCGACTCACGTGACTCGTCTCGCATCTCCTTTCTCTACGTCTCC
CGAGGTCGAAGATCGCCTATGTTAAAGGCACTCTGTTTGTGATAGGATAG
GATACATGATGCATGTTGCTGCGTGTTTGCGAACACGCAGCGGCGTGCAA
GTCGTGTCATCCGGGCATATCAGTGCGTCTGCAAGCTTCCTGACCCCGGA
CATGTCCCCTCTAGCCTCATTTCCCCacttccgctccctctcttcttcca
catTTCACCCTCGCTCCTCAGGCGTTCCCCCCTGGAACATGCCCGCACGT
GGCAGCGTGCGTTCAAGTCGTGGCAGAATTCTTTTGACTACGACAAATTC
ACGCTCGAAgggggccttggccgcggtTTAGTCAGGGGAGAAGCCGGGGA
CAGAGCAGACGAAGCCTTGAAGAATGGATGGTCGCCGGAGGCCGCCCGAG
TCCTGGTGGAtggggacgagaaggaggtggaaagctTGGTGCGGGAGAAA
CTCCGAGGGTGTCGGACCGAGttgaccgaggaggaggtgaaggaggaggt
ggctcGCCTCCGTAAGGAGcttcgggggggaagagggaaactGGAAGCCA
TGGCCACGGACAGGATGGATCTGGTaagtga back to topCoding sequence (CDS) from alignment at CM002456.1:82960..83890+ >rna649 ID=rna649|Name=rna649|organism=Nannochloropsis gaditana|type=CDS|length=1992bp|location=Sequence derived from alignment at CM002456.1:82960..83890+ (Nannochloropsis gaditana)
ATGCACGGACGACACTTCTTCCTACAGGCCTACTCAAGCAAAGGAAAGAT
GCCAGCACAATTCCCACCCTCGTTAAAGCGCCGGATGCCTGGGTCTTTGG
CCCGTGTTCGACGATACCTCGAAGAATCATGGGGAAGCCTCCAGCCAATG
GACAATCCCCCAGGGTACGACGAAGCGCTAGGTGTCACAGCCAAAGAGGA
TAAGCCAAGGCGCTGGCGTTCCCCCCTGGAACATGCCCGCACGTGGCAGC
GTGCGTTCAAGTCGTGGCAGAATTCTTTTGACTACGACAAATTCACGCTC
GAAgggggccttggccgcggtTTAGTCAGGGGAGAAGCCGGGGACAGAGC
AGACGAAGCCTTGAAGAATGGATGGTCGCCGGAGGCCGCCCGAGTCCTGG
TGGAtggggacgagaaggaggtggaaagctTGGTGCGGGAGAAACTCCGA
GGGTGTCGGACCGAGttgaccgaggaggagGATGGATCTGGTaagtgaAT
GCACGGACGACACTTCTTCCTACAGGCCTACTCAAGCAAAGGAAAGATGC
CAGCACAATTCCCACCCTCGTTAAAGCGCCGGATGCCTGGGTCTTTGGCC
CGTGTTCGACGATACCTCGAAGAATCATGGGGAAGCCTCCAGCCAATGGA
CAATCCCCCAGGGTACGACGAAGCGCTAGGTGTCACAGCCAAAGAGGATA
AGCCAAGGCGCTGGCGTTCCCCCCTGGAACATGCCCGCACGTGGCAGCGT
GCGTTCAAGTCGTGGCAGAATTCTTTTGACTACGACAAATTCACGCTCGA
AgggggccttggccgcggtTTAGTCAGGGGAGAAGCCGGGGACAGAGCAG
ACGAAGCCTTGAAGAATGGATGGTCGCCGGAGGCCGCCCGAGTCCTGGTG
GAtggggacgagaaggaggtggaaagctTGGTGCGGGAGAAACTCCGAGG
GTGTCGGACCGAGttgaccgaggaggagGATGGATCTGGTaagtgaATGC
ACGGACGACACTTCTTCCTACAGGCCTACTCAAGCAAAGGAAAGATGCCA
GCACAATTCCCACCCTCGTTAAAGCGCCGGATGCCTGGGTCTTTGGCCCG
TGTTCGACGATACCTCGAAGAATCATGGGGAAGCCTCCAGCCAATGGACA
ATCCCCCAGGGTACGACGAAGCGCTAGGTGTCACAGCCAAAGAGGATAAG
CCAAGGCGCTGGCGTTCCCCCCTGGAACATGCCCGCACGTGGCAGCGTGC
GTTCAAGTCGTGGCAGAATTCTTTTGACTACGACAAATTCACGCTCGAAg
ggggccttggccgcggtTTAGTCAGGGGAGAAGCCGGGGACAGAGCAGAC
GAAGCCTTGAAGAATGGATGGTCGCCGGAGGCCGCCCGAGTCCTGGTGGA
tggggacgagaaggaggtggaaagctTGGTGCGGGAGAAACTCCGAGGGT
GTCGGACCGAGttgaccgaggaggagGATGGATCTGGTaagtgaATGCAC
GGACGACACTTCTTCCTACAGGCCTACTCAAGCAAAGGAAAGATGCCAGC
ACAATTCCCACCCTCGTTAAAGCGCCGGATGCCTGGGTCTTTGGCCCGTG
TTCGACGATACCTCGAAGAATCATGGGGAAGCCTCCAGCCAATGGACAAT
CCCCCAGGGTACGACGAAGCGCTAGGTGTCACAGCCAAAGAGGATAAGCC
AAGGCGCTGGCGTTCCCCCCTGGAACATGCCCGCACGTGGCAGCGTGCGT
TCAAGTCGTGGCAGAATTCTTTTGACTACGACAAATTCACGCTCGAAggg
ggccttggccgcggtTTAGTCAGGGGAGAAGCCGGGGACAGAGCAGACGA
AGCCTTGAAGAATGGATGGTCGCCGGAGGCCGCCCGAGTCCTGGTGGAtg
gggacgagaaggaggtggaaagctTGGTGCGGGAGAAACTCCGAGGGTGT
CGGACCGAGttgaccgaggaggagGATGGATCTGGTaagtga back to top
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