EWM30033.1, cds640 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM30033.1 vs. NCBI_GenBank
Match: gi|585112660|gb|EWM30033.1| (lipase family protein [Nannochloropsis gaditana]) HSP 1 Score: 731.48 bits (1887), Expect = 0.000e+0 Identity = 351/351 (100.00%), Postives = 351/351 (100.00%), Query Frame = 0 Query: 1 MSVPHILLFYAPLQGRRLSGMPPHHKTRIKGVILSSLVSSCVLFLTSITCQAAARLANTKQQNSSFYNETAVRVMLDYAAAAYYCRTSACEAWACSACSRHPRTEVRRVYDNVHNGNGFVGWDPVEGVVVVSFAGTDTTSVANWIDDLDEVKTPWPLEGCQECKVHAGFLTTYSALRPQLQPLVEALVRDHPQAPVWVTGHSLGAALAVLCMVDLLSLSYPVRAVVNFGQPRVGNQHFSSFVAAQSASLSLCFYRLVHHRDPVPHLPPASFGFHHSPFEVFYTKNETYYHICDATGEDKHCSDHYLIDPSIKDHLNYLGVLFGGEEVEGRLQELMHSTGWEMEASVLVSAS 351 MSVPHILLFYAPLQGRRLSGMPPHHKTRIKGVILSSLVSSCVLFLTSITCQAAARLANTKQQNSSFYNETAVRVMLDYAAAAYYCRTSACEAWACSACSRHPRTEVRRVYDNVHNGNGFVGWDPVEGVVVVSFAGTDTTSVANWIDDLDEVKTPWPLEGCQECKVHAGFLTTYSALRPQLQPLVEALVRDHPQAPVWVTGHSLGAALAVLCMVDLLSLSYPVRAVVNFGQPRVGNQHFSSFVAAQSASLSLCFYRLVHHRDPVPHLPPASFGFHHSPFEVFYTKNETYYHICDATGEDKHCSDHYLIDPSIKDHLNYLGVLFGGEEVEGRLQELMHSTGWEMEASVLVSAS Sbjct: 1 MSVPHILLFYAPLQGRRLSGMPPHHKTRIKGVILSSLVSSCVLFLTSITCQAAARLANTKQQNSSFYNETAVRVMLDYAAAAYYCRTSACEAWACSACSRHPRTEVRRVYDNVHNGNGFVGWDPVEGVVVVSFAGTDTTSVANWIDDLDEVKTPWPLEGCQECKVHAGFLTTYSALRPQLQPLVEALVRDHPQAPVWVTGHSLGAALAVLCMVDLLSLSYPVRAVVNFGQPRVGNQHFSSFVAAQSASLSLCFYRLVHHRDPVPHLPPASFGFHHSPFEVFYTKNETYYHICDATGEDKHCSDHYLIDPSIKDHLNYLGVLFGGEEVEGRLQELMHSTGWEMEASVLVSAS 351
BLAST of EWM30033.1 vs. NCBI_GenBank
Match: gi|585108471|gb|EWM26431.1| (lipase [Nannochloropsis gaditana]) HSP 1 Score: 343.199 bits (879), Expect = 1.221e-110 Identity = 156/262 (59.54%), Postives = 197/262 (75.19%), Query Frame = 0 Query: 62 QNSSFYNETAVRVMLDYAAAAYYCRTSACEAWACSACSRHPRTEVRRVYDNVHNGNGFVGWDPVEGVVVVSFAGTDTTSVANWIDDLDEVKTPWPLEGCQECKVHAGFLTTYSALRPQLQPLVEALVRDHPQAPVWVTGHSLGAALAVLCMVDLLSLSYPVRAVVNFGQPRVGNQHFSSFVAAQSASLSLCFYRLVHHRDPVPHLPPASFGFHHSPFEVFYTKNETYYHICDATGEDKHCSDHYLIDPSIKDHLNYLGVLFG 323 QN YN TAVR +LDYA A+Y C+TSACEAW CS CSRHP TEVRR+ + +G+GFVG++ VEG +VV+FAGT + W+ +LD K +P +GC+ C+VH GF T Y LR Q++ V+ ++ HP AP+WVTGHSLGAA+AV CMVDL+SLSY VR VVNFGQPRVGN+ F++FVA+ + SL YRLVHHRDPVPHLPP +FGFHH PFEVFY +++T Y +C+ +GED CSD +L+D + DHLNYLGV G Sbjct: 319 QNRRLYNITAVRTILDYAEASYSCKTSACEAWNCSTCSRHPDTEVRRI--SAPDGDGFVGYNSVEGALVVAFAGTSMDDIVEWMANLDFKKEDFPHDGCEGCQVHTGFYTAYLELRSQVREFVQYFLQQHPDAPIWVTGHSLGAAIAVHCMVDLMSLSYNVRRVVNFGQPRVGNKQFATFVASLAESLDFPLYRLVHHRDPVPHLPPRAFGFHHQPFEVFYNEDQTSYIVCNDSGEDLQCSDQFLVDLDVADHLNYLGVPMG 578
BLAST of EWM30033.1 vs. NCBI_GenBank
Match: gi|585102495|gb|EWM22078.1| (lipase family protein [Nannochloropsis gaditana]) HSP 1 Score: 179.874 bits (455), Expect = 3.127e-49 Identity = 113/298 (37.92%), Postives = 149/298 (50.00%), Query Frame = 0 Query: 62 QNSSFYNETAVRVMLDYAAAAYYCRTSACEAWACSACSRHPRTEVRRVYDNVHNGNGFVGWDPVEGVVVVSFAGTDTTSVANWIDDLDEVKTPWPLEGCQECKVHAGFLTTYSALRPQLQPLVEALVRDHPQAPVWVTGHSLGAALAVLCMVDLL-SLSYPVRAVVNFGQPRVGNQHFSSFVAAQSASLSLC-FYRLVHHRDPVPHLPPA-----SFGFHHSPFEVFY---------------TKNETY--------------YHICD-ATGEDKHCSDHYLIDPSIKDHLNYLGVLF 322 Q YNET R +D AY C C C +P V V+ V +G+GFVG D + VV + F GTD +V N+ DDLD + +P GC+ C VH GF TY LR Q+ + DHP A + +TGHSLG A+AV ++L+ SL V+ + FGQPRVGN F +F+ ++ SLS C +R+ HRDP+ HLPP S GF H P EVFY N+T+ Y +CD GED SD + +D + DH+ YLG F Sbjct: 97 QREYGYNETMARHFVDLCGCAYCC------IRGCDTCWTYPALNVTEVHSRVLDGHGFVGLDAPQNVVYIVFTGTDPLAVQNYFDDLDFIPVEFP--GCEGCWVHRGFYHTYLGLRDQVLDTLAVFSHDHPSAKLHITGHSLGGAMAVFAALELIHSLGLRVQTLYTFGQPRVGNAAFQTFL-HEALSLSSCAHFRITQHRDPIVHLPPTFVPSRSMGFQHEPQEVFYPCGVLRGNITKMSGTESNKTFNPWNSSVSDPESCQYIVCDPVEGEDPRGSDRFRVDLNFVDHVTYLGFPF 385
BLAST of EWM30033.1 vs. NCBI_GenBank
Match: gi|514693737|ref|XP_004994440.1| (hypothetical protein PTSG_04353 [Salpingoeca rosetta] >gi|326427047|gb|EGD72617.1| hypothetical protein PTSG_04353 [Salpingoeca rosetta]) HSP 1 Score: 175.637 bits (444), Expect = 9.900e-49 Identity = 107/264 (40.53%), Postives = 146/264 (55.30%), Query Frame = 0 Query: 65 SFYNETAVRVMLDYAAAAYYCRTSACEAWACSAC---SRHPRTEVRRVYDNVHNGNGFVGWDPVEGVVVVSFAGTDTTSVANWIDDLDEVKTPWPLEGC-QECKVHAGFLTTYSALRPQLQPLVEALVRDHPQAPVWVTGHSLGAALAVLCMVDLLSLSYPVRAVVN--FGQPRVGNQHFSSFVAAQSASLSLCFYRLVHHRDPVPHLPPASFGFHHSPFEVFYTKNET---YYHICDATGEDKHCSDHYLIDPSIKDHLNYLG 319 SF E ++R + Y+AAAY C S + W+C C +++ Y + G+VG D V +VV+F GT ++ WIDDL +KT G + KVH GF Y ++ + VE+ R +P + VTGHSLGAALA +C +D LS+ +P ++ + FGQPRVGN F F S S +R VH+RD VPHLP + GFHH EVFY + + H C+ +GED CSD + +D SI DHLNYLG Sbjct: 56 SFDYEISLR-GVQYSAAAY-CSNSTVKDWSCKPCHGAGLPALSDINVFYAKKTSTYGYVGLDSVNKYIVVAFQGTH--NLKQWIDDLKFMKTDLHYPGAGSDVKVHRGFYEAYQEVKGTVDRFVESTFRQNPNYRILVTGHSLGAALAAMCSLD-LSIQFPSASIYHYTFGQPRVGNAPFYDFFKQSSIKAS---FRFVHNRDIVPHLPLEAMGFHHIATEVFYKEQFSGPESLHECNGSGEDPDCSDQFNVDISISDHLNYLG 311
BLAST of EWM30033.1 vs. NCBI_GenBank
Match: gi|922857500|gb|KOO25738.1| (lipase family protein [Chrysochromulina sp. CCMP291]) HSP 1 Score: 174.481 bits (441), Expect = 1.043e-48 Identity = 97/265 (36.60%), Postives = 146/265 (55.09%), Query Frame = 0 Query: 60 KQQNSSFYNETAVRVMLDYAAAAYYCRTSACEAWACSACSRHPRTEVRRVYDNVHNGNGFVGWDPVEGVVVVSFAGTDTTSVANWIDDLDEVKTPWPLEGCQECKVHAGFLTTYSALRPQLQPLVEALVRDHPQAPVWVTGHSLGAALAVLCMVDL----LSLSYPVRAVVNFGQPRVGNQHFSSFVAAQSASLSLCFYRLVHHRDPVPHLPPASFGFHHSPFEVFYTKNETYYHICDATGEDKHCSDHYLIDPSIKDHLNYLGV 320 + S Y+ + + ++ AAY C + W C+ C + V + GFVG P +VV SF G+D ++ NWID++D KT C C+VH GF +++++ + V+ L + A ++VTGHSLGAA+A LC V+L SL +P+ V +G+PRVGN F+ F + + +R+ H RD VPHLPP +FGFHH+ EV+YT+++ Y +CD +GED C+D SI DHL Y+G+ Sbjct: 21 RSDGSGSYSPSRALLFAHFSNAAY-CSAANISYWDCAPCRAADKDFVVSKVVSGGGMQGFVGQAPGNDIVV-SFRGSD--NIRNWIDNIDITKTD-AYPKCDGCRVHTGFYKAWNSVKDDVVKEVQRLHEANSSANIFVTGHSLGAAVAALCAVELGASSQSLGFPIAGVYTYGEPRVGNDQFAKFYM----TGTQVSWRVTHWRDIVPHLPPEAFGFHHTATEVWYTEDQKNYTVCDGSGEDPTCADQLFEAVSIDDHLQYMGI 276
BLAST of EWM30033.1 vs. NCBI_GenBank
Match: gi|955171108|emb|CUG86636.1| (lipase 3, putative [Bodo saltans]) HSP 1 Score: 175.252 bits (443), Expect = 1.308e-48 Identity = 116/305 (38.03%), Postives = 158/305 (51.80%), Query Frame = 0 Query: 47 SITCQAAARLANTKQQNSSFYNETAVRVMLDYAAAAYYCRTSACEAWACSACSRHPRTEVRRVYDN-VHNGNGFVGWDPVEGVVVVSFAGTDTTSVANWIDDLDEVKTPWPLEGCQECKVHAGFLTTYSALRPQLQPLVEALVRDHPQAPVWVTGHSLGAALAVLCMVDL---LSLSYPVRAVVNFGQPRVGNQHFSSFVAAQSASLSLCFYRLVHHRDPVPHLPPASFGFHHSPFEVFYTK--NETYYHICDA-TGEDKHCSDHYLIDPSIKDHLNYLGVLFG------GEEVEGRLQELMHST 338 S+ C AA + Q+S Y+E L Y AAY C + +W C +C HP +V+ Y+N +G F G+DP +VVSF G+ ANWI D D P+P C C+VH GF Y L + V L+ HP A V VTGHSLGAA+A+ VD+ +S ++ V NFG+PR+GN F+++ AA + YRL H DPVPHLPP FGF H+ E++Y N ++ H D T ED +CSD +I DH YLG+ G +E ++Q +M T Sbjct: 5 SLLCIAAVAVTLAYAQDS--YSEDQAWNSLLYCKAAY-CDVNKIASWTCESCGDHPNFQVKGAYNNGSFHGQCFTGYDPSRNQIVVSFRGS--ADFANWIADFDFFMMPYPDAECVGCQVHTGFFQVYQELAAAVLRDVSELLIAHPSAEVLVTGHSLGAAIAMHAGVDIARKISGAHSKTYVYNFGEPRLGNPAFAAWSAAVLPAGKQ--YRLTHATDPVPHLPPMDFGFLHARHELWYNNNGNTSFIHCNDTLTSEDPNCSDS-IIPLGFGDHTVYLGICTGCHCADFDQEFYNKMQIVMPRT 301
BLAST of EWM30033.1 vs. NCBI_GenBank
Match: gi|299469881|emb|CBN76735.1| (lipase [Ectocarpus siliculosus]) HSP 1 Score: 174.481 bits (441), Expect = 1.647e-47 Identity = 115/330 (34.85%), Postives = 165/330 (50.00%), Query Frame = 0 Query: 45 LTSITCQAAARLANTKQQNSSFYNETAVRVMLDYAAAAYYCRTSACEAWACSACSRHP-RTEVRRVYDNVHNGNGFVGWD--------------------------PVEG--------------VVVVSFAGTDTTSVANWIDDLDEVKTPWPLEG-CQECKVHAGFLTTYSALRPQLQPLVEALVRDHPQAPVWVTGHSLGAALAVLCMVDLL---------SLSYPVRAVVNFGQPRVGNQHFSSFVAAQSASLSLCFYRLVHHRDPVPHLPPASFGFHHSPFEVFYTKNETYYHICDATGEDKHCSDHY-LIDPSIKDHLNYLGVLF 322 +T +T AA A S Y+E V++ AAY C T +W+C AC P V + N GFVG D EG +V++F+GTD +SV NWIDDL+ P G C++C+VH GFL Y ++ Q++ + ++ +P + +TGHSLGAALAVLC +DL + S + FG PRVGN+ F++ S+ +RLVHHRDPVPHLP ++G+HH P EVFYT++++ Y +C+ +GED CS+ + I +I+DHL YL V + Sbjct: 31 VTDLTTTVAASSAGDGGLGLS-YDEGLASVIVRLTEAAY-C-TPQLASWSCKACQHFPGMRNVTVINGEKRNVRGFVGVDIGDAEPSNRYTSTTRGPGPDDRRHLRAAEGDDRDAGGAAQSGKARIVITFSGTDPSSVKNWIDDLEATTVPNTYGGLCEQCQVHRGFLAAYDLVKDQVRYAIGQHMQYNPHVQILITGHSLGAALAVLCFLDLRVNRGLGQGPNSSVSFAPIYLFGSPRVGNEAFATLTTRPGVSI----FRLVHHRDPVPHLPLEAWGYHHPPTEVFYTEDQSSYQVCNNSGEDDKCSNQFWAIFGNIEDHLWYLVVNY 353
BLAST of EWM30033.1 vs. NCBI_GenBank
Match: gi|829173246|ref|XP_001017150.3| (lipase family protein [Tetrahymena thermophila SB210] >gi|586737005|gb|EAR96905.3| lipase family protein (macronuclear) [Tetrahymena thermophila SB210]) HSP 1 Score: 168.318 bits (425), Expect = 2.057e-46 Identity = 103/285 (36.14%), Postives = 156/285 (54.74%), Query Frame = 0 Query: 44 FLTSIT-CQAAARLANTKQQNSSFYNETAVRVMLDYAAAAYYCRTSACEAWAC-SACSRHPR-TEVRRVYDNVHNGNGFVGWDPVEGVVVVSFAGTDTTSVANWIDDLDEVKTPWPLEGCQECKVHAGFLTTYSALRPQLQPLVEALVRDHPQAPVWVTGHSLGAALAVLCMVDLLSLSYPVRAVVNFGQPRVGNQHFSSFVAAQSASLSLCFYRLVHHRDPVPHLPPASFGFHHSPFEVFYTKNETYYHICDATGEDKHCSDHYLIDPSIKDHLNYLGVLFGGE 325 FL I+ + A+++ NT Y+ M YA AA C+ ++W C + C +P T+V+ Y++ H+ GF+G+D ++V+SF T NW+ D D K + CQ C+VH GFL T++ LR + + LV +P AP+ +TGHSLGAA+++L V++ V + N+GQPRVGN+ F+ F S+ YR++H+RDPVPH+P GF H+ EV+Y KN T Y +C + ED CSD + + DH Y+G G + Sbjct: 13 FLIGISESKRASQIPNT-------YDPDFSLKMAHYAWAAR-CQQDTIQSWTCGTPCQLNPNITDVQVFYNSTHHSLGFIGYDYFNQMIVLSFR--PTMDNLNWLYDFDYFKINYSY--CQGCQVHRGFLFTWNDLRQNVLAYTQFLVSKYPNAPLIITGHSLGAAVSMLAAVEINHYIKKVDYIYNYGQPRVGNKQFADFC----ESIIPVIYRIIHNRDPVPHVPLQKMGFQHTRTEVWYNKNNTSYQVCKGS-EDPQCSDK-IKEYLPFDHAWYMGFNIGTD 279
BLAST of EWM30033.1 vs. NCBI_GenBank
Match: gi|167527922|ref|XP_001748117.1| (hypothetical protein [Monosiga brevicollis MX1] >gi|163773535|gb|EDQ87174.1| predicted protein [Monosiga brevicollis MX1]) HSP 1 Score: 167.548 bits (423), Expect = 3.972e-46 Identity = 102/274 (37.23%), Postives = 151/274 (55.11%), Query Frame = 0 Query: 54 ARLANTKQQNSSFYNETAVRVMLDYAAAAYYCRTSACEAWACSAC-SRHPRTEVRRVYDNVH-NGNGFVGWDPVEGVVVVSFAGTDTTSVANWIDDLDEVKTPWPLEGCQ-ECKVHAGFLTTYSALRPQLQPLVEALVRDHPQAPVWVTGHSLGAALAVLCMVDLLSLSYPVRAVVN--FGQPRVGNQHFSSFVAAQSASLSLCFYRLVHHRDPVPHLPPASFGFHHSPFEVFYTKN---ETYYHICDATGEDKHCSDHYLIDPSIKDHLNYLG 319 ARLAN YN V L +AA YC S +AW+C C +V+ V+ + NG++G D ++V+F GT + WIDDLD K G + KVH+GF Y ++ + +V + ++P+ + VTGHSLGAALA +C +D LS+ +P +++ +GQPRVGNQ F+ F + + + YR+ H+ DPVPHLP S GF+H EV+Y + ++ +CD +GED +CS+ + D + DHLNYLG Sbjct: 7 ARLANGGFD----YNIALGSVNL---SAAAYCDPSVIKAWSCPPCVGTGLALDVKDVFHASETDTNGYIGIDEAGKRIIVAFQGTH--DLTQWIDDLDFFKADLQYPGASSDVKVHSGFYKAYRQVKQNVDQVVNQTLFNNPEYTILVTGHSLGAALAAMCSLD-LSIGHPQARILHYTYGQPRVGNQAFAQFYESHNLAQ---HYRMTHNEDPVPHLPLESMGFYHISTEVYYGEKFEGQSSLKVCDGSGEDPNCSNQHWTDLKVSDHLNYLG 267
BLAST of EWM30033.1 vs. NCBI_GenBank
Match: gi|954186671|gb|KRW99527.1| (hypothetical protein PPERSA_03997 [Pseudocohnilembus persalinus]) HSP 1 Score: 167.548 bits (423), Expect = 1.420e-45 Identity = 100/297 (33.67%), Postives = 150/297 (50.51%), Query Frame = 0 Query: 43 LFLTSITCQAAARLANTKQQNSSFYNETAVRVMLDYAAAAYYCRTSACEAWACSACSRHPR-TEVRRVYDNVHNGNGFVGWDPVEGVVVVSFAGTDTTSVANWIDDLDEVKTPWPLEGCQECKVHAGFLTTYSALRPQLQPLVEALVRDHPQAPVWVTGHSLGAALAVLCMVDLLSLSYPVRAVVNFGQPRVGNQHFSSFVAAQSASLSLCFYRLVHHRDPVPHLPPASFGFHHSPFEVFY--TKNETYYHICDATG--EDKHCSDHYLIDPSIKDHLNYLGVLFGGEEVEGRLQEL 334 L L+ I CQ FY+ + ML YA A+Y C + W AC HP T+++ V + H ++G+D +V++F G+ ++ NWID+LD KT + C +C VH GF + A+ ++ +L H A +VTGHSLG A+A LC ++L + V FG PRVGNQ F+ + AQ + +VH++DPVPH+P + GF P E +Y + Y C + G E+ CS+ L+ +I DHLNYLGV G +++ E+ Sbjct: 9 LLLSVIACQM-----------QDFYSPQTSKSMLYYAKASY-CEADQIKNWNGQACDFHPSMTDIKVVKNLAHGSQLYLGFDADANAIVIAFRGS--QNIQNWIDNLDYKKTEYDF--CNDCMVHKGFYKAWQAVSDEVMSTYRSLKSSHSGAKTYVTGHSLGGAIATLCALELRQAGFQVDNFYVFGCPRVGNQQFAEY-GAQQLPYEV---EVVHYKDPVPHVPLSVQGFVRIPTETYYYSKTDVNAYKWCPSAGGEENSKCSNKLLLATNIGDHLNYLGVYTGCTDIQDIQDEI 285 The following BLAST results are available for this feature:
BLAST of EWM30033.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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