EWM30048.1, cds624 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM30048.1 vs. NCBI_GenBank
Match: gi|585112678|gb|EWM30048.1| (Dihydrodipicolinate reductase [Nannochloropsis gaditana]) HSP 1 Score: 540.421 bits (1391), Expect = 0.000e+0 Identity = 267/267 (100.00%), Postives = 267/267 (100.00%), Query Frame = 0 Query: 1 MRLFLLLVAFPALVSSFVGMLPSRHKQSQGRQSQLRMMAKLPKVAVMVNGLPGAMGKEVAAACLRRGLEVCSVGLTGPQVDEECVDVDDGEGGKPQTIRLVKGPVTGAGDEECDARLQGLVAGYRESGTRLIAVDYTHPTAVNPNGMLYARHKMDFVMGTTGGDRDKLLKDVEEAGIYAVIAPNMAKQIVALQAGLETMAGTFPGAFEGYNLRVRLPSLPSSLPFSLPLLFPFYFSFVFKVYLLFFLDKSISGQASLVTVLGSSVLS 267 MRLFLLLVAFPALVSSFVGMLPSRHKQSQGRQSQLRMMAKLPKVAVMVNGLPGAMGKEVAAACLRRGLEVCSVGLTGPQVDEECVDVDDGEGGKPQTIRLVKGPVTGAGDEECDARLQGLVAGYRESGTRLIAVDYTHPTAVNPNGMLYARHKMDFVMGTTGGDRDKLLKDVEEAGIYAVIAPNMAKQIVALQAGLETMAGTFPGAFEGYNLRVRLPSLPSSLPFSLPLLFPFYFSFVFKVYLLFFLDKSISGQASLVTVLGSSVLS Sbjct: 1 MRLFLLLVAFPALVSSFVGMLPSRHKQSQGRQSQLRMMAKLPKVAVMVNGLPGAMGKEVAAACLRRGLEVCSVGLTGPQVDEECVDVDDGEGGKPQTIRLVKGPVTGAGDEECDARLQGLVAGYRESGTRLIAVDYTHPTAVNPNGMLYARHKMDFVMGTTGGDRDKLLKDVEEAGIYAVIAPNMAKQIVALQAGLETMAGTFPGAFEGYNLRVRLPSLPSSLPFSLPLLFPFYFSFVFKVYLLFFLDKSISGQASLVTVLGSSVLS 267
BLAST of EWM30048.1 vs. NCBI_GenBank
Match: gi|585112677|gb|EWM30047.1| (Dihydrodipicolinate reductase [Nannochloropsis gaditana]) HSP 1 Score: 439.499 bits (1129), Expect = 2.759e-153 Identity = 214/214 (100.00%), Postives = 214/214 (100.00%), Query Frame = 0 Query: 1 MRLFLLLVAFPALVSSFVGMLPSRHKQSQGRQSQLRMMAKLPKVAVMVNGLPGAMGKEVAAACLRRGLEVCSVGLTGPQVDEECVDVDDGEGGKPQTIRLVKGPVTGAGDEECDARLQGLVAGYRESGTRLIAVDYTHPTAVNPNGMLYARHKMDFVMGTTGGDRDKLLKDVEEAGIYAVIAPNMAKQIVALQAGLETMAGTFPGAFEGYNLRV 214 MRLFLLLVAFPALVSSFVGMLPSRHKQSQGRQSQLRMMAKLPKVAVMVNGLPGAMGKEVAAACLRRGLEVCSVGLTGPQVDEECVDVDDGEGGKPQTIRLVKGPVTGAGDEECDARLQGLVAGYRESGTRLIAVDYTHPTAVNPNGMLYARHKMDFVMGTTGGDRDKLLKDVEEAGIYAVIAPNMAKQIVALQAGLETMAGTFPGAFEGYNLRV Sbjct: 1 MRLFLLLVAFPALVSSFVGMLPSRHKQSQGRQSQLRMMAKLPKVAVMVNGLPGAMGKEVAAACLRRGLEVCSVGLTGPQVDEECVDVDDGEGGKPQTIRLVKGPVTGAGDEECDARLQGLVAGYRESGTRLIAVDYTHPTAVNPNGMLYARHKMDFVMGTTGGDRDKLLKDVEEAGIYAVIAPNMAKQIVALQAGLETMAGTFPGAFEGYNLRV 214
BLAST of EWM30048.1 vs. NCBI_GenBank
Match: gi|1210525968|dbj|GAX15254.1| (4-hydroxy-tetrahydrodipicolinate reductase [Fistulifera solaris]) HSP 1 Score: 172.94 bits (437), Expect = 2.015e-48 Identity = 92/189 (48.68%), Postives = 119/189 (62.96%), Query Frame = 0 Query: 26 KQSQGRQSQLRMMAKLPKVAVMVNGLPGAMGKEVAAACLRRGLEVCSVGLTGPQVDEECVDVDDGEGGKPQTIRLVKGPVTGAGDEECDARLQGLVAGYRESGTRLIAVDYTHPTAVNPNGMLYARHKMDFVMGTTGGDRDKLLKDVEEAGIYAVIAPNMAKQIVALQAGLETMAGTFPGAFEGYNLRV 214 +QS R + L M +MVNGLPG M A ACLR+GL++ V +TGP V+ + V D GK Q ++L+ T +LQ +AG + SG L+A+DYTHP+AVN N Y + K+ FVMGTTGGDRD+L+KDV+ G + VIAPNM KQIVA+QA LE +A FPGAF+GY L V Sbjct: 55 QQSARRITTLHAMDD--DTFIMVNGLPGPMATAAAEACLRKGLKLAPVAMTGPDVEPSTISVFDTVTGKKQDVKLIPSKET--------EKLQASIAGLKTSG-NLLAIDYTHPSAVNSNAQFYVKEKIPFVMGTTGGDRDQLMKDVQ--GHFCVIAPNMGKQIVAMQAALEDLATKFPGAFDGYKLSV 230
BLAST of EWM30048.1 vs. NCBI_GenBank
Match: gi|1210521105|dbj|GAX19853.1| (4-hydroxy-tetrahydrodipicolinate reductase [Fistulifera solaris]) HSP 1 Score: 167.548 bits (423), Expect = 1.056e-46 Identity = 90/189 (47.62%), Postives = 120/189 (63.49%), Query Frame = 0 Query: 26 KQSQGRQSQLRMMAKLPKVAVMVNGLPGAMGKEVAAACLRRGLEVCSVGLTGPQVDEECVDVDDGEGGKPQTIRLVKGPVTGAGDEECDARLQGLVAGYRESGTRLIAVDYTHPTAVNPNGMLYARHKMDFVMGTTGGDRDKLLKDVEEAGIYAVIAPNMAKQIVALQAGLETMAGTFPGAFEGYNLRV 214 +QS R + L M +MVNG+PG M A ACLR+GL++ V +TGP V+ + V D K Q ++L+ +E + +LQ +AG + SG L+A+DYTHP+AVN N Y + K+ FVMGTTGGDRD+L+KDV+ G + VIAPNM KQIVA+QA LE +A FPGAF+GY L V Sbjct: 26 QQSARRITTLHAMDD--DTFIMVNGMPGPMATAAAEACLRKGLKLAPVAMTGPDVEPSTISVYDTVTEKKQDVKLIPS-------KEIE-KLQASIAGLKASG-NLLAIDYTHPSAVNSNAQFYVKEKIPFVMGTTGGDRDQLMKDVQ--GHFCVIAPNMGKQIVAMQAALEDLATKFPGAFDGYKLSV 201
BLAST of EWM30048.1 vs. NCBI_GenBank
Match: gi|397567388|gb|EJK45557.1| (hypothetical protein THAOC_35827 [Thalassiosira oceanica]) HSP 1 Score: 167.162 bits (422), Expect = 3.470e-46 Identity = 92/196 (46.94%), Postives = 120/196 (61.22%), Query Frame = 0 Query: 22 PSRHKQSQGRQSQLRMMAKLP-KVAVMVNGLPGAMGKEVAAACLRRGLEVCSVGLTGPQVDEECVDVDDGEGGKPQTIRLVKGPVTGAGDEECDARLQGLVAGYRESGTR--LIAVDYTHPTAVNPNGMLYARHKMDFVMGTTGGDRDKLLKDVEEAGIYAVIAPNMAKQIVALQAGLETMAGTFPGAFEGYNLRV 214 PSR ++ A+ P + VMVNG+PG M A ACLR+GL + V +TGP ++ V V D G+ +RL+ P G EE + L AG RE+ + ++A+DYTHP+AVN N + YA + + FVMGTTGGDRDKL+ DV +AVIAPNM KQIVA+QAGLE +A FP AF GY L+V Sbjct: 37 PSRMTETTQTDGGADADAEDPASLRVMVNGMPGPMASAAAEACLRKGLSLSPVAMTGPDIEPSTVTVTDDVTGRSADVRLI--PANEDGREEIKSSL----AGIREAAGKENVLAIDYTHPSAVNGNAVFYAENDLPFVMGTTGGDRDKLMDDVVSRKAFAVIAPNMGKQIVAMQAGLEDLATKFPSAFAGYKLKV 226
BLAST of EWM30048.1 vs. NCBI_GenBank
Match: gi|219112073|ref|XP_002177788.1| (predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1] >gi|217410673|gb|EEC50602.1| predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 163.696 bits (413), Expect = 1.050e-45 Identity = 86/169 (50.89%), Postives = 107/169 (63.31%), Query Frame = 0 Query: 46 VMVNGLPGAMGKEVAAACLRRGLEVCSVGLTGPQVDEECVDVDDGEGGKPQTIRLVKGPVTGAGDEECDARLQGLVAGYRESGTRLIAVDYTHPTAVNPNGMLYARHKMDFVMGTTGGDRDKLLKDVEEAGIYAVIAPNMAKQIVALQAGLETMAGTFPGAFEGYNLRV 214 VMVNG+PG M A ACLR+GL++ V +TGP V+ V D G ++RLV + D E L VAG + + RL+A+DYTHP+AVN N Y + FVMGTTGGDRD+L+KDVE G + VIAPNM KQIVA+QA LE +A +P AFEGY L V Sbjct: 1 VMVNGMPGPMATAAAEACLRKGLQLAPVAMTGPDVEASTFIVTDTVTGTSSSVRLVP-----SSDTE---ELVSAVAGMQTASERLLAIDYTHPSAVNGNAKFYVEQNIPFVMGTTGGDRDELMKDVE--GHFCVIAPNMGKQIVAMQAALEDLANKYPSAFEGYQLEV 159
BLAST of EWM30048.1 vs. NCBI_GenBank
Match: gi|224003431|ref|XP_002291387.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220973163|gb|EED91494.1| predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 163.696 bits (413), Expect = 1.990e-45 Identity = 86/171 (50.29%), Postives = 108/171 (63.16%), Query Frame = 0 Query: 46 VMVNGLPGAMGKEVAAACLRRGLEVCSVGLTGPQVDEECVDVDDGEGGKPQTIRLVKGPVTGAGDEECDARLQGLVAGYRES--GTRLIAVDYTHPTAVNPNGMLYARHKMDFVMGTTGGDRDKLLKDVEEAGIYAVIAPNMAKQIVALQAGLETMAGTFPGAFEGYNLRV 214 +MVNG+PG M A ACLR+GL + +TGP ++ + V D +RL+ P T G E + L GL RES ++A+DYTHP+AVN NG+ YA +K+ FVMGTTGGDRD LL D+E +AVIAPNM KQIVA+QAGLE +A FP AF GY L V Sbjct: 14 IMVNGMPGPMATAAAEACLRKGLSLSPFAMTGPDIESSTITVYDDVTDTSANVRLI--PATDDGRMEIVSSLAGL----RESVGDKNVLAIDYTHPSAVNANGVFYADNKLPFVMGTTGGDRDLLLSDMESREAFAVIAPNMGKQIVAMQAGLEDLAAKFPSAFAGYKLEV 178
BLAST of EWM30048.1 vs. NCBI_GenBank
Match: gi|922866563|gb|KOO33395.1| (dihydrodipicolinate reductase [Chrysochromulina sp. CCMP291]) HSP 1 Score: 157.918 bits (398), Expect = 3.044e-43 Identity = 91/172 (52.91%), Postives = 115/172 (66.86%), Query Frame = 0 Query: 44 VAVMVNGLPGAMGKEVAAACLRR-GLEVCSVGLTGPQVDEECVDVDDGEGGKPQTIRLVKGPVTGAGDEECDARLQGLVAGYRESGTRLIAVDYTHPTAVNPNGMLYARHKMDFVMGTTGGDRDKLLKDVEEAGIYAVIAPNMAKQIVALQAGLETMAGTFPGAFEGYNLRV 214 VAVM+NGL GAMG+E+AA CL+R G+ + L + + V VDDG GG T+RL G E D + + A Y +SG+ L+ +D+THP+AVN N YA HK+ FVMGTTGGDR+ L+K +G YAVIAPNMAKQIVALQA LE MA FPG+F+GY+L V Sbjct: 9 VAVMMNGLRGAMGREIAAVCLKRPGVTLAPFAL---EKEGGEVVVDDGCGGPAVTVRLY-------GTEARDELAERVKAEYPQSGS-LVCIDFTHPSAVNGNAEWYAAHKLPFVMGTTGGDREALMKCTRASGTYAVIAPNMAKQIVALQAALEQMARDFPGSFDGYSLSV 169
BLAST of EWM30048.1 vs. NCBI_GenBank
Match: gi|299115195|emb|CBN74026.1| (dihydrodipicolinate reductase [Ectocarpus siliculosus]) HSP 1 Score: 154.066 bits (388), Expect = 2.304e-41 Identity = 86/171 (50.29%), Postives = 109/171 (63.74%), Query Frame = 0 Query: 44 VAVMVNGLPGAMGKEVAAACLRRGLEVCSVGLTGPQVDEECVDVDDGEGGKPQTIRLVKGPVTGAGDEECDARLQGLVAGYRESGTRLIAVDYTHPTAVNPNGMLYARHKMDFVMGTTGGDRDKLLKDVEEAGIYAVIAPNMAKQIVALQAGLETMAGTFPGAFEGYNLRV 214 V VM+NGL G MG +VAAACLR+G + ++G E V V D +GG P T+ LV P A E CD + L R SG ++ VDYT P+AVN N YA+H ++FVMGTTGGDRD L+ E +G+YAVIAPNM KQIVALQ+ ++ MA FPG+F Y L + Sbjct: 51 VWVMMNGLSGKMGLDVAAACLRKGFRIAPYAMSGSGSGE--VSVADPKGGDPTTVTLV--PSDDA--EGCDKAVAELK--RRCSGGSVVVVDYTTPSAVNANAEFYAKHGLNFVMGTTGGDRDALMSVTEGSGVYAVIAPNMGKQIVALQSAIDNMAREFPGSFGDYKLEI 213
BLAST of EWM30048.1 vs. NCBI_GenBank
Match: gi|1072227691|gb|OEU12430.1| (dihydrodipicolinate reductase [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 151.754 bits (382), Expect = 2.136e-40 Identity = 88/214 (41.12%), Postives = 124/214 (57.94%), Query Frame = 0 Query: 5 LLLVAFPAL--VSSFVGMLPSRHKQSQGRQSQLRMMAKLPK----VAVMVNGLPGAMGKEVAAACLRRGLEVCSVGLTGPQVDEECVDVDDGEGGKPQTIRLVKGPVTGAGDEECDARLQGLVAGYRESGTRLIAVDYTHPTAVNPNGMLYARHKMDFVMGTTGGDRDKLLKDVEEAGIYAVIAPNMAKQIVALQAGLETMAGTFPGAFEGYNL 212 +LLV F + V++F+ + P+ S S L M+ V VMVNG+PG M A ACLR+GL++ V +TGP + + V D K ++L+ + +E A ++G+ E ++A+DYTHP+AVN N Y K+ FVMGTTGGDR+KL++ V +A +AVIAPNMAKQIVA+QA LE +A FPG F Y + Sbjct: 12 ILLVLFSSFFDVTAFL-VSPAVKTNSWKPSSSLIQMSSTDNDEADVFVMVNGMPGPMATAAAEACLRKGLKLTPVAMTGPDIKANTIVVYDPISEKSSQVKLIPS----SQKDELLAAIEGMKVSCGEKN--ILAIDYTHPSAVNSNAEFYVEQKLPFVMGTTGGDREKLMQGVNDAKHFAVIAPNMAKQIVAMQAALEDLAKKFPGCFSSYKM 218 The following BLAST results are available for this feature:
BLAST of EWM30048.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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