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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100225g2.3530.mrna |
| Orig protein id | gnl|cribi|Naga_100225g2.3530 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002456.1 | supercontig | CM002456.1:8605..9879 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna619 ID=rna619|Name=rna619|organism=Nannochloropsis gaditana|type=mRNA|length=2141bp
CGTCAGATAATAAACCCCGTCCTGCTTGAGATTTTAGCTCGCGCTGGCTT
TGATTCCTCCCGTTTCGCATCGCTGTGGAAATAAAAGCCCATCTCTTTAT
CACGATTATATTTTATTTCACATCTTACAGCAGAGGCCAGAGAAAAGAAA
TAAACTGAACTGCAGCACTTGTTAAGGTCGGATCTCGATAGAGCGAAAAA
ACTTCCTTGGAGCTACGGCGCCAAAGTCAAACAAGACGAGCGGTAGTTCT
GAGTTCATTTGGCAACCTGTTGCTTAGACTAGTAAGGAGGCACTTGCAAC
ATGGCCAAAGGCCACACTACTCTGGGCTGTGATGGCCCCGGCATGAGTGT
TTTCCTGATGGGCTTGTTTACGGGAACATTCAGCTCTATAACCATCAAGG
TCGCCTATCAAATGACTTCAGTCGGCGCGGACGGGACGAGAAAACCGTTT
GAAAAGCCTCTTACTACAACGTTTCTCATGTTCATGGCCATGGCGATGGG
TTAGTTCAACTCTTTCTCCTTTTTTAATTCCTCTTAAGATGCTCTCATCA
ACCCTTTCTTCCCATCTTGACGCCTTTTCCCCAGCCCTTCCAGCCATGCG
CGTCTACGCTCGTCTTTACCCTCCCTCTCCATCGGACGAGCCCAAACCGC
TGAACTGGCGTCTCTGTCTGCTTGTCCTCGCTCCCTCCCTCTTCGACCTC
GTGGGGACAGCTTTTGCGAAAGCGGGCCTACTCTATGTTACCGTATCCGT
CTATCAGCTCGTACGATGCACGGTCATCATCATCACAGCCCTTCTCAAGG
CCTTCGTATTGAAGGACCATCTCGCCCCGCACATGTGGCTCGGTGTTAGC
ATCAACCTTGTGGCCATGGTACTTGTGGCCTCCACCACCTTCTTCGATCA
CAAAAATACTGTTGACAATCGAGACCCCCGTGTGGGTATTGGTTTCATCC
TTTTGTCGTGTCTGGTCCAGGGCACTCAATACGTGTTTGAGGAGAAGGTT
ATGACAGTGGAAAGCCTCCCGCCGATGGTGCTGGTTGGGTTGGAGGGCTT
CTGGGGCATGATCCTCATGCTTTTGGTCGTCTTTCCCTCAGCCTACTATC
TTCCCGGAACCGATGAGGGCGGTTCTATGGAGAATGTCTTCGACTCGCTG
GCGATGGTTCGCAATAGCGCACCGCTACAGGCAGTCCTCCTTATATTTTT
CCTCACGGTAGCTTGCTACAACATCTTTGCCATCTACGTCACGCATTTTC
TTTCCTCAGTCTGGCACGCCATCCTCGACAACTTCCGGCCCATCTCTGTC
TGGGGCACGGACCTTCTCATCTACTACGTCTTCACGTACGGCCGCTTTGG
AGAGGCCTGGACGGTCTACTCCTGGCTGCAGTTTGGAGGAATGCTCCTCC
TCTTTTTTGGCACCGCCGTCTACAACGGCTCCGTACCTTGGCTTCTCTTT
CCTTCCTACGCTGGCTATGAGAGGGTCGAGGCCGGGACGGAGGAAGGCAA
AGGTGATGCCAGGATTCGGGCGCAATCAATTGAGGATTTTGCACCTGTCA
TTCGGACAGATCGTAGTATGGCCTCGCCTGCTCTCATGCGGTCTCCTCTG
ATCCAAGACCGCACTGATCCCCGGCTCATTCGAGAGCGAGGAGCCTCTCT
CTACGGAACGCCTCGTGCAGATCATGCTCCGGGTAGACTGGCATCCTCCT
ATCAAGGGAGTGCAGGAGGACGGAGGGATATAGGTTCAGGCAGTTATGGA
AATACCATCACTTTCGCATCAATGTCATTGCGAGAGTTACAAACTCATCA
TGGTGGAAATTTTTATACACGATCACGTGAAAGGAAGAAAGGACAAGACG
AACGGGGCGAGGGGGTCTCGGGAGTGCATCCACCTATGTCGAATCCCTCG
CAAGGAGAAAAAGAACGAGGAAAGGTGGACAGAGTGTATCAGGGCCAGAG
AGAGAGCAAGAAAGAAGGGGGTGACATGCGTCTATCCTTAACATCATCAG
TGGAGGAAGGAACAATTGGGGTAAAGAATTGAACAAGGCAAGAAGACGGG
ATGAGGCAGGAGAAGGAGAGTGAATGAAGCTCGTAATTTTTCCAAACATA
TATAACATCCAAAAAATTGGAGAAAGAGCACTGTTGCACGT back to topprotein sequence of rna619 >rna619-protein ID=rna619-protein|Name=rna619|organism=Nannochloropsis gaditana|type=polypeptide|length=280bp
MAVDFKRLFALSTPVLQLFFNIFCLPVAFAHHARHGVSSTPAFQPSGSGA
LQISRKASLAVTPVALLGLMPPVSVASSTTRTAPPSLPREVEGRPTLREK
GRPPLLEALVYLPKGVNYWGQLLPESKNSAPDSIAIAGTGTEALFLTASF
QNKLILGARVPMQGIMFPFLAQFYEDNILGGKNIWEGVKSKDLVVRARVC
PTGSYPPCNVPLLKAASLSKFFPEVRDPNTPESAEVIARNVRIGASLMLQ
PVTESTTLERMRVMDGGLDRIRREFCELKG back to topmRNA from alignment at CM002456.1:8605..9879+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna619 ID=rna619|Name=rna619|organism=Nannochloropsis gaditana|type=mRNA|length=1275bp|location=Sequence derived from alignment at CM002456.1:8605..9879+ (Nannochloropsis gaditana)
ATCATAGAATCACGCACTCAATCATTCAGCGTGGCAAAAAGCACCGACCG
TCTGTACTCGAATGTATGCGGCGTCGTTcgtagggaggaggttaagccAA
GACCCTCGTACTACATGGTTTGAGACTTGCTGCCGCTGGGGCGCATTTCA
AGCCTGCAGGTGCGCACATGACCTGATCTTTGGGCTCGCAAGCCACGTCG
TTTGCCAAAACTTTCAAACATGGCAATTAAAAgctattttcttcttttct
tgtaGGCATGGCAGTTGACTTCAAGAGACTTTTTGCTCTATCGACCCCTG
TCCTCCAGCTGTTTTTTAACATCTTCTGCCTTCCAGTCGCATTTGCGCAT
CATGCACGTCATGGCGTGTCTTCCACACCTGCCTTCCAACCGTCAGGCTC
AGGGGCTTTACAAATCTCGCGCAAGGCTTCCTTGGCAGTGACTCCTGTTG
CCCTCCTAGGCCTTATGCCTCCTGTCAGCGTTGCCTCCTCAACCACCCGA
ACGGCTCCACCTTCTCTACCAAGAGAGGTAGAGGGTCGACCGACGCTACG
CGAGAAAGgccgtcctccactcctcGAGGCCTTAGTGTATCTGCCCAAAG
GTGTTAATTATTGGGGCCAACTTCTGCCTGAGAGCAAGAACTCAGCTCCG
GACAGTATAGCAATCGCAGGCACGGGCACTGAAGCCTTGTTTCTTACTGC
TTCTTTTCAGAATAAGCTTATTTTGGGCGCGCGCGTGCCCATGCAGGGTA
TCAtgttccctttcttggcaCAGTTTTACGAGGATAACATTTTGGGCGGC
AAAAACATATGGGAAGGTGTCAAGTCCAAGGACCTCGTGGTTCGGGCCCG
TGTGTGTCCAACTGGTAGCTATCCTCCATGCAACGTCCCCCTCTTGAAAG
CTGCGTCACTTTCCAAGTTCTTTCCGGAGGTGCGTGACCCGAACACGCCC
GAGAGTGCCGAGGTCATCGCCCGTAACGTCCGCATCGGCGCGAGCTTGAT
GCTGCAGCCGGTCACCGAATCCACGACGTTAGAGCGAATGCGGGTTATGG
ATGGAGGCTTAGACAGAATAAGGAGAGAGTTTTGTGAATTGAAAGGGTAG
CATGAGTAAAATAATGCAACGAGGGGTAGACAAGAAAAATGGGCCATGCC
GATGACACGCGATGTTGGAGCTCTTTCTTTTGCGGATAATCTATTTACAC
AACTCTCGGACGCCAGGATGTAAGAGCAGGTGGGGACGTATTTCTTTAAA
CAACGGCTTGAGGTCAAGGGCCCCG back to topCoding sequence (CDS) from alignment at CM002456.1:8605..9879+ >rna619 ID=rna619|Name=rna619|organism=Nannochloropsis gaditana|type=CDS|length=843bp|location=Sequence derived from alignment at CM002456.1:8605..9879+ (Nannochloropsis gaditana)
ATGGCAGTTGACTTCAAGAGACTTTTTGCTCTATCGACCCCTGTCCTCCA
GCTGTTTTTTAACATCTTCTGCCTTCCAGTCGCATTTGCGCATCATGCAC
GTCATGGCGTGTCTTCCACACCTGCCTTCCAACCGTCAGGCTCAGGGGCT
TTACAAATCTCGCGCAAGGCTTCCTTGGCAGTGACTCCTGTTGCCCTCCT
AGGCCTTATGCCTCCTGTCAGCGTTGCCTCCTCAACCACCCGAACGGCTC
CACCTTCTCTACCAAGAGAGGTAGAGGGTCGACCGACGCTACGCGAGAAA
GgccgtcctccactcctcGAGGCCTTAGTGTATCTGCCCAAAGGTGTTAA
TTATTGGGGCCAACTTCTGCCTGAGAGCAAGAACTCAGCTCCGGACAGTA
TAGCAATCGCAGGCACGGGCACTGAAGCCTTGTTTCTTACTGCTTCTTTT
CAGAATAAGCTTATTTTGGGCGCGCGCGTGCCCATGCAGGGTATCAtgtt
ccctttcttggcaCAGTTTTACGAGGATAACATTTTGGGCGGCAAAAACA
TATGGGAAGGTGTCAAGTCCAAGGACCTCGTGGTTCGGGCCCGTGTGTGT
CCAACTGGTAGCTATCCTCCATGCAACGTCCCCCTCTTGAAAGCTGCGTC
ACTTTCCAAGTTCTTTCCGGAGGTGCGTGACCCGAACACGCCCGAGAGTG
CCGAGGTCATCGCCCGTAACGTCCGCATCGGCGCGAGCTTGATGCTGCAG
CCGGTCACCGAATCCACGACGTTAGAGCGAATGCGGGTTATGGATGGAGG
CTTAGACAGAATAAGGAGAGAGTTTTGTGAATTGAAAGGGTAG back to top
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