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Properties
| Property Name | Value |
|---|
| Product | protein of unknown function DUF4149 |
| Orig transcript id | gnl|cribi|Naga_100170g7.5472.mrna |
| Orig protein id | gnl|cribi|Naga_100170g7.5472 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002455.1 | supercontig | CM002455.1:1525916..1527270 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna610 ID=rna610|Name=rna610|organism=Nannochloropsis gaditana|type=mRNA|length=980bp
ATGGTGGGGGTAGGGGCCGGCTTCTATCTGACCGGGTGGTCGGGCGGGGC
GGGGGGGGAAGAGGTGGGGGGCGATGATGCTGGGAGCCACCGCGACAGGA
TTCACGGTGTGGCTGGAGGTCGGTGCAGGGGGCCTTCCTCGAGTGCCCGC
GAGGTCGGCAGCCACGTATCCCTTTCCTCCTCCGCCTCCGCCTCGTCCCA
CCGCGATCGAAATTTCCTCCGTCCTCGCCACATTTTGCTCGTCATTGCTG
GGATCTTATCTCTTGTGACTGCCGTAGCCGTCCCGCTGGCGTACAACGAA
GTCTTTCTTGCCGATAAAGAAACGAGAGCCAACCTTGCGGAACGCCGACA
GACGCTTTTGTTCACTTCCCTACTTCTAGCCCACCCGCTTTTGGCCCTCC
ACCTCCATCATTTCCTTGGATATATCCCCTCACGCACTAATATATGCTTT
CCGTGGTGGTCCTTTACCTTTCCAAAAATGAAAGGAAGGGTCGGCTACTA
TTGGTGCCTCGCATGGTTGACGGCGTCGTTCGCCTTCCTCCTGCTCGTGG
CGTTAGACGTGCGTACACAGACTGCCCTGGGACTGGTCCCTATGCCTCTT
AAACTGTGGGAAGTGGTGCTAGGATCGGTGGTACTGGCGTTAGGGGTGTG
GATGCACGTTGGAATGTGTGCCGTCTGGTGCGTGGAACGGGGGGAAGACC
GGGAGGACGGAGAGAGAAAGGGGGACGAGGCGGAAGGGGGTGTGGGGAGG
AATAGCTATGGCGCAGTAGGTGCGAATGTAGACCGCACGCGTGAAGACGA
CGGGAGAAAGTACAGGGATCTGGAAGAGCAAACTCCTCTGCTGACGTCCA
CGCACAAAGTAGCTTAGGACCAAAATTTATGTACAACGAGCGGCGGAAGG
ACCTTTGAATGTATTAAAGGTGATGATTCACCGCAAAGCACGTATTAAGC
GCCGAATAAACGACTCCATGAATGCACAGC back to topprotein sequence of rna610 >rna610-protein ID=rna610-protein|Name=rna610|organism=Nannochloropsis gaditana|type=polypeptide|length=222bp
MATYHALVVLASACMLIFLGTTTEATSTTHPYASFIHLASVGAWFGISFW
VTFVAGVLLFKYLPRHQFGSVQGKIFPYYFALSLVLTSLALASWVHLEGG
LDLLAAIKSGNEDGKVVACLGGAALLSALQLLVLGPCVTKAMEARNKKEK
EEGFADTTSKVGRSPELLQLGAEFARMHGLSSTANLLVFLGALFQLYVLS
AKHVTFATMAPTVAKATFWPWS back to topmRNA from alignment at CM002455.1:1525916..1527270- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna610 ID=rna610|Name=rna610|organism=Nannochloropsis gaditana|type=mRNA|length=1355bp|location=Sequence derived from alignment at CM002455.1:1525916..1527270- (Nannochloropsis gaditana)
TGATGGTGCCAAATTTCAGGCAAGCAAAGCGACCGCGGGCGAAGAAGGGC
GAAGGCGACACTTTCTTTACAGCCCCCGCCAAAAATGTTGGTCAAATCGG
ACCACAGACACACATCCTCGTGTCGTGCAGACATAAAGATAATGTTGTGG
AGTTCAATGCCATCGATCGAAAATATGCCCCCAAGGATTTTAGGGCTGGG
AGACGATTTTTTGTTAACTTTCACTTTTTCAAGTGCAACTTGTTCTTTGT
TGGCGCCATAAGTCCTTACGTCTCGAATGACACCTAATTTCCGTGAGGGA
TCCCATGCATCCAACCTACCAACTCCACAGCGGCAAATAAGCCCGTTTTA
AACACACAGTTTGAAAGGAGCATGGCAACTTACCATGCCCTCGTAGTGCT
GGCCTCTGCCTGCATGCTCATCTTCCTGGGTACCACCACAGAGGCCACAA
GCACAACACATCCCTACGCATCGTTCATTCATCTGGCCAGCGTGGGGGCG
TGGTTCGGCATCTCGTTCTGGGTCACTTTCGTGGCGGGCGTCCTTCTTTT
CAAATACCTGCCCCGTCATCAATTCGGAAGCGTGCAAGGGAAAATTTTCC
CCTACTACTTCGCTCTCTCCCTTGTCCTCACCTCCCTGGCGCTGGCATCC
TGGGTGCACCTGGAGGGAGGCCTCGACTTACTCGCCGCCATCAAGAGCGG
CAACGAGGACGGCAAGGTCGTTGCTTGTCTGGGCGGGGCTGCTCTGCTCT
CTGCATTGCAGCTTCTCGTGCTGGGACCATGCGTGACCAAGGCCATGGAG
GCCCGCAACAAAAAAGAGAAGGTAGGCGCCTTTAGTGACACCGTGATTGT
ACAATCTCTCTGTCCACTCACTTGATCCTTACACATTTCATACCGCCGCC
TTCTCTCAGGAGGAAGGCTTCGCAGACACCACAAGCAAGGTGGGCCGGAG
CCCTGAGCTGCTACAGCTGGGGGCGGAGTTCGCGCGCATGCACGGCCTTT
CATCCACCGCGAATCTCCTAGTTTTTCTGGGAGCACTTTTTCAGCTCTAC
GTCTTGTCTGCCAAGCATGTCACGTTTGCGACGATGGCGCCAACGGTCGC
GAAAGCCACCTTTTGGCCGTGGTCATAGAGGAGGTTGTCACGAGAAGTCA
TGAGAAGGGCATGCAAGGTGTCTCTTCGGTGCCAGGACATCAAATGAACT
TGCGCAGTCCAAGATGTCAAGGTCGAGAGTTGTGTGTATGTTGGGATGTT
TGTGTGTGGTTGTTATCAATCGCTCTGACGTTCATAACATTGAAGTCCGA
GCGCGTATTCAAGAAAGAGATTCATTGTAATGGAATTTAGATCAAGAGCT
CACGA back to topCoding sequence (CDS) from alignment at CM002455.1:1525916..1527270- >rna610 ID=rna610|Name=rna610|organism=Nannochloropsis gaditana|type=CDS|length=1338bp|location=Sequence derived from alignment at CM002455.1:1525916..1527270- (Nannochloropsis gaditana)
GAGGAAGGCTTCGCAGACACCACAAGCAAGGTGGGCCGGAGCCCTGAGCT
GCTACAGCTGGGGGCGGAGTTCGCGCGCATGCACGGCCTTTCATCCACCG
CGAATCTCCTAGTTTTTCTGGGAGCACTTTTTCAGCTCTACGTCTTGTCT
GCCAAGCATGTCACGTTTGCGACGATGGCGCCAACGGTCGCGAAAGCCAC
CTTTTGGCCGTGGTCATAGATGGCAACTTACCATGCCCTCGTAGTGCTGG
CCTCTGCCTGCATGCTCATCTTCCTGGGTACCACCACAGAGGCCACAAGC
ACAACACATCCCTACGCATCGTTCATTCATCTGGCCAGCGTGGGGGCGTG
GTTCGGCATCTCGTTCTGGGTCACTTTCGTGGCGGGCGTCCTTCTTTTCA
AATACCTGCCCCGTCATCAATTCGGAAGCGTGCAAGGGAAAATTTTCCCC
TACTACTTCGCTCTCTCCCTTGTCCTCACCTCCCTGGCGCTGGCATCCTG
GGTGCACCTGGAGGGAGGCCTCGACTTACTCGCCGCCATCAAGAGCGGCA
ACGAGGACGGCAAGGTCGTTGCTTGTCTGGGCGGGGCTGCTCTGCTCTCT
GCATTGCAGCTTCTCGTGCTGGGACCATGCGTGACCAAGGCCATGGAGGC
CCGCAACAAAAAAGAGAAGGAGGAAGGCTTCGCAGACACCACAAGCAAGG
TGGGCCGGAGCCCTGAGCTGCTACAGCTGGGGGCGGAGTTCGCGCGCATG
CACGGCCTTTCATCCACCGCGAATCTCCTAGTTTTTCTGGGAGCACTTTT
TCAGCTCTACGTCTTGTCTGCCAAGCATGTCACGTTTGCGACGATGGCGC
CAACGGTCGCGAAAGCCACCTTTTGGCCGTGGTCATAGATGGCAACTTAC
CATGCCCTCGTAGTGCTGGCCTCTGCCTGCATGCTCATCTTCCTGGGTAC
CACCACAGAGGCCACAAGCACAACACATCCCTACGCATCGTTCATTCATC
TGGCCAGCGTGGGGGCGTGGTTCGGCATCTCGTTCTGGGTCACTTTCGTG
GCGGGCGTCCTTCTTTTCAAATACCTGCCCCGTCATCAATTCGGAAGCGT
GCAAGGGAAAATTTTCCCCTACTACTTCGCTCTCTCCCTTGTCCTCACCT
CCCTGGCGCTGGCATCCTGGGTGCACCTGGAGGGAGGCCTCGACTTACTC
GCCGCCATCAAGAGCGGCAACGAGGACGGCAAGGTCGTTGCTTGTCTGGG
CGGGGCTGCTCTGCTCTCTGCATTGCAGCTTCTCGTGCTGGGACCATGCG
TGACCAAGGCCATGGAGGCCCGCAACAAAAAAGAGAAG back to top
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