EWM30097.1, cds581 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM30097.1 vs. NCBI_GenBank
Match: gi|585112739|gb|EWM30097.1| (sphingolipid delta 4 desaturase c-4 hydroxylase protein des2 [Nannochloropsis gaditana]) HSP 1 Score: 744.577 bits (1921), Expect = 0.000e+0 Identity = 365/365 (100.00%), Postives = 365/365 (100.00%), Query Frame = 0 Query: 1 MDIGSLCLCDGLGGPWRSLSLLRPPLPILPPRTQAFLLPSHWSHAPNPRHHPRLRFPFSHVTTAQVLFPGIMCPGPQDGKGTGLVENPLVAAAAGLYAETEQPDKDEGVWDFFRSYTDEPHKSRREAILKAHPEIRKLFGHCPWTKYKAAAIISTQVMAAVVLRHAPFPLLLFLTYTLSGSCNHFLTLIMHEVAHNLAFKRLFANRVFSIIVNLPLGIPAAISFKRYHMEHHKYQGDETVDVDLPTDVEGKLFRGGPLKLLFVFLMPAFYSLRPLFVRPKKPSNWELVNVLAQLTFDALIFYILGWKSLFYLVVGTLLGNNHFDPFLVPFQTDLVFLPPSCSRPDLRSLFPVPDDTDMAVAFLRA 365 MDIGSLCLCDGLGGPWRSLSLLRPPLPILPPRTQAFLLPSHWSHAPNPRHHPRLRFPFSHVTTAQVLFPGIMCPGPQDGKGTGLVENPLVAAAAGLYAETEQPDKDEGVWDFFRSYTDEPHKSRREAILKAHPEIRKLFGHCPWTKYKAAAIISTQVMAAVVLRHAPFPLLLFLTYTLSGSCNHFLTLIMHEVAHNLAFKRLFANRVFSIIVNLPLGIPAAISFKRYHMEHHKYQGDETVDVDLPTDVEGKLFRGGPLKLLFVFLMPAFYSLRPLFVRPKKPSNWELVNVLAQLTFDALIFYILGWKSLFYLVVGTLLGNNHFDPFLVPFQTDLVFLPPSCSRPDLRSLFPVPDDTDMAVAFLRA Sbjct: 1 MDIGSLCLCDGLGGPWRSLSLLRPPLPILPPRTQAFLLPSHWSHAPNPRHHPRLRFPFSHVTTAQVLFPGIMCPGPQDGKGTGLVENPLVAAAAGLYAETEQPDKDEGVWDFFRSYTDEPHKSRREAILKAHPEIRKLFGHCPWTKYKAAAIISTQVMAAVVLRHAPFPLLLFLTYTLSGSCNHFLTLIMHEVAHNLAFKRLFANRVFSIIVNLPLGIPAAISFKRYHMEHHKYQGDETVDVDLPTDVEGKLFRGGPLKLLFVFLMPAFYSLRPLFVRPKKPSNWELVNVLAQLTFDALIFYILGWKSLFYLVVGTLLGNNHFDPFLVPFQTDLVFLPPSCSRPDLRSLFPVPDDTDMAVAFLRA 365
BLAST of EWM30097.1 vs. NCBI_GenBank
Match: gi|553192724|ref|XP_005855632.1| (sphingolipid delta-4 desaturase [Nannochloropsis gaditana CCMP526] >gi|422293421|gb|EKU20721.1| sphingolipid delta-4 desaturase [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 406.371 bits (1043), Expect = 1.307e-138 Identity = 209/248 (84.27%), Postives = 210/248 (84.68%), Query Frame = 0 Query: 72 MCPGPQDGKGTGLVENPLVAAAAGLYAETEQPDKDEGVWDFFRSYTDEPHKSRREAILKAHPEIRKLFGHCPWTKYKAAAIISTQVMAAVVLRHAPFPLLLFLTYTLSGSCNHFLTLIMHEVAHNLAFKRLFANRVFSIIVNLPLGIPAAISFKRYHMEHHKYQGDETVDVDLPTDVEGKLFRGGPLKLLFVFLMPAFYSLRPLFVRPKKPSNWELVNVLAQLTFDALIFYILGWKSLFYLVVGTLLG 319 MCPGPQDGKGTGLVENPLVAAAAGLYAETEQPDKDEGVWDFFRSYTDEPHKSR PW+ APFPLLLFLTYTLSGSCNHFLTLIMHEVAHNLAFKRLFANRVFSIIVNLPLGIPAAISFKRYHMEHHKYQGDETVDVDLPTDVEGKLFRGGPLKLLFVFLMPAFYSLRPLFVRPKKPSNWELVNVLAQLTFDALIFYILGWKSLFYLVVGTLLG Sbjct: 1 MCPGPQDGKGTGLVENPLVAAAAGLYAETEQPDKDEGVWDFFRSYTDEPHKSRSWP---------------PWS-----------------FATAPFPLLLFLTYTLSGSCNHFLTLIMHEVAHNLAFKRLFANRVFSIIVNLPLGIPAAISFKRYHMEHHKYQGDETVDVDLPTDVEGKLFRGGPLKLLFVFLMPAFYSLRPLFVRPKKPSNWELVNVLAQLTFDALIFYILGWKSLFYLVVGTLLG 216
BLAST of EWM30097.1 vs. NCBI_GenBank
Match: gi|1210517609|dbj|GAX23524.1| (sphingolipid Delta-4 desaturase [Fistulifera solaris]) HSP 1 Score: 236.113 bits (601), Expect = 1.551e-71 Identity = 111/218 (50.92%), Postives = 149/218 (68.35%), Query Frame = 0 Query: 102 QPDKDEGVWDFFRSYTDEPHKSRREAILKAHPEIRKLFGHCPWTKYKAAAIISTQVMAAVVLRHAPFPLLLFLTYTLSGSCNHFLTLIMHEVAHNLAFKRLFANRVFSIIVNLPLGIPAAISFKRYHMEHHKYQGDETVDVDLPTDVEGKLFRGGPLKLLFVFLMPAFYSLRPLFVRPKKPSNWELVNVLAQLTFDALIFYILGWKSLFYLVVGTLLG 319 QP KD DFF SYT+EPH +RR+ IL +P++++LFGH P KY ++S Q+ A +R + + Y + G+CNH L L MHE++HNL FK++ NR+FS+ NLP+GIP+AISFKRYH+EHHKYQG+ VDVD+PT EG++F+ +K LFV FY+LRPLFV PKKP WE +N +TFDA I Y LG ++FYL++ T LG Sbjct: 24 QPGKD----DFFWSYTEEPHATRRKQILAKYPQVKELFGHDPNFKYVVTLLVSIQIGMAYYMRFCSAWVFVLGAYAVGGTCNHMLMLAMHELSHNLGFKKMIHNRIFSLFANLPIGIPSAISFKRYHLEHHKYQGEVGVDVDIPTPAEGRIFQSTFMKFLFVMNQIFFYALRPLFVNPKKPGKWEFINAACCITFDAAILYTLGPWAMFYLILSTYLG 237
BLAST of EWM30097.1 vs. NCBI_GenBank
Match: gi|223995251|ref|XP_002287309.1| (acyl desaturase/hydroxylase, partial [Thalassiosira pseudonana CCMP1335] >gi|220976425|gb|EED94752.1| acyl desaturase/hydroxylase, partial [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 230.72 bits (587), Expect = 6.618e-70 Identity = 113/225 (50.22%), Postives = 152/225 (67.56%), Query Frame = 0 Query: 95 GLYAETEQPDKDEGVWDFFRSYTDEPHKSRREAILKAHPEIRKLFGHCPWTKYKAAAIISTQVMAAVVLRHAPFPLLLFLTYTLSGSCNHFLTLIMHEVAHNLAFKRLFANRVFSIIVNLPLGIPAAISFKRYHMEHHKYQGDETVDVDLPTDVEGKLFRGGPLKLLFVFLMPAFYSLRPLFVRPKKPSNWELVNVLAQLTFDALIFYILGWKSLFYLVVGTLLG 319 G + E+ +K + F S+ +EPH+ R++ IL HP+I++ G P TKYK A ++ Q+++ +L+ AP+ LF YTLSGS NH +TL MHE++HNL K + NR +I+ NLP+GIPAA SFKRYHMEHHK+QG++ VDVD+PTD EG F P K+L+ L P FYSLRPL V PK+P+ WE +N+L + FDA I Y G + L YLVVGTL G Sbjct: 2 GEILDREREEKVQAEPQFRWSHDEEPHRRRKQEILSHHPKIKQFMGIDPTTKYKVAFWVAFQLLSLHLLQGAPWYTWLFCCYTLSGSINHMMTLAMHELSHNLGAKGVVPNRFLAILANLPMGIPAAASFKRYHMEHHKFQGEDVVDVDIPTDFEGWFFTSTPRKILWCLLQPLFYSLRPLAVNPKQPTRWEFINILCIIVFDAAIVYFWGIRELLYLVVGTLFG 226
BLAST of EWM30097.1 vs. NCBI_GenBank
Match: gi|1210530822|dbj|GAX10773.1| (sphingolipid Delta-4 desaturase [Fistulifera solaris]) HSP 1 Score: 231.491 bits (589), Expect = 8.184e-70 Identity = 109/218 (50.00%), Postives = 148/218 (67.89%), Query Frame = 0 Query: 102 QPDKDEGVWDFFRSYTDEPHKSRREAILKAHPEIRKLFGHCPWTKYKAAAIISTQVMAAVVLRHAPFPLLLFLTYTLSGSCNHFLTLIMHEVAHNLAFKRLFANRVFSIIVNLPLGIPAAISFKRYHMEHHKYQGDETVDVDLPTDVEGKLFRGGPLKLLFVFLMPAFYSLRPLFVRPKKPSNWELVNVLAQLTFDALIFYILGWKSLFYLVVGTLLG 319 QP KD DFF SYT+EPH +RR+ IL +P++++LFGH P KY ++S Q+ A +R + + Y + G+CNH L L MHE++HNL FK++ NR+FS+ NLP+GIP+AISFKRYH+EHHKYQG+ VDVD+PT EG++F+ +K LFV FY+LRPLFV PKKP WE +N + + FDA I LG ++FYL++ T LG Sbjct: 24 QPGKD----DFFWSYTEEPHATRRKEILAKYPQVKELFGHDPNFKYVVTLLVSIQIGMAYYMRFCSGWVFVLGAYAVGGTCNHMLMLAMHELSHNLGFKKMIHNRIFSLFANLPIGIPSAISFKRYHLEHHKYQGEVGVDVDIPTPAEGRIFQSTFMKFLFVMNQIFFYALRPLFVNPKKPGKWEFINAVCCIAFDAAILCTLGPWAMFYLILSTYLG 237
BLAST of EWM30097.1 vs. NCBI_GenBank
Match: gi|676451698|ref|XP_009052791.1| (hypothetical protein LOTGIDRAFT_150030 [Lottia gigantea] >gi|556107774|gb|ESO96426.1| hypothetical protein LOTGIDRAFT_150030 [Lottia gigantea]) HSP 1 Score: 221.476 bits (563), Expect = 4.508e-66 Identity = 102/212 (48.11%), Postives = 147/212 (69.34%), Query Frame = 0 Query: 111 DFFRSYTDEPHKSRREAILKAHPEIRKLFGHCPWTKYKAAAIISTQVMAAVVLRHAPFPLLLFLTYTLSGSCNHFLTLIMHEVAHNLAF--KRLFANRVFSIIVNLPLGIPAAISFKRYHMEHHKYQGDETVDVDLPTDVEGKLFRGGPLKLLFVFLMPAFYSLRPLFVRPKKPSNWELVNVLAQLTFDALIFYILGWKSLFYLVVGTLLGN 320 DF SYTDEPH +RR+ IL +P+++KL G P KY ++ Q +A ++R A +P+LL TY G+ NH L L +HE++HNLA+ + NR+ I NLP+G+P +ISFK+YH+EHH+YQGD DVD+P+++EGK+F +K+++V L P FY++RP FV PK S E++N++ Q++FD L+ Y GWKSLFYL+ GTLLG Sbjct: 9 DFEWSYTDEPHATRRKEILGKYPQMKKLMGSDPNLKYSVLLLVVIQCLALYLVRDASWPMLLVATYCFGGTVNHSLNLAIHEISHNLAYGHSKPLWNRLLGFIANLPIGVPTSISFKKYHLEHHRYQGDVLRDVDVPSEIEGKIFVNTFMKVIWVILQPLFYAIRPFFVYPKPLSMLEVINIIIQVSFDTLVVYTCGWKSLFYLIAGTLLGT 220
BLAST of EWM30097.1 vs. NCBI_GenBank
Match: gi|698815158|ref|XP_009840608.1| (hypothetical protein H257_14482 [Aphanomyces astaci] >gi|574104338|gb|ETV69870.1| hypothetical protein H257_14482 [Aphanomyces astaci]) HSP 1 Score: 221.09 bits (562), Expect = 7.786e-66 Identity = 99/209 (47.37%), Postives = 139/209 (66.51%), Query Frame = 0 Query: 111 DFFRSYTDEPHKSRREAILKAHPEIRKLFGHCPWTKYKAAAIISTQVMAAVVLRHAPFPLLLFLTYTLSGSCNHFLTLIMHEVAHNLAFKRLFANRVFSIIVNLPLGIPAAISFKRYHMEHHKYQGDETVDVDLPTDVEGKLFRGGPLKLLFVFLMPAFYSLRPLFVRPKKPSNWELVNVLAQLTFDALIFYILGWKSLFYLVVGTLLG 319 DF+ TDEPH +RR+ I +P+I+ LFGHCP TKY ++ Q + A V + + + L + Y + G+ NH + + MHE++HNL FK+ NR+ S+I N+P+G+PAAISFKRYHMEHH+YQG++ VDVD+PT +EGK+F KL+FVF FYSLRPLFV PK P WE VN + + ++ I++ G L Y + T+LG Sbjct: 19 DFYWEKTDEPHATRRKLITAKYPQIKSLFGHCPRTKYYVVVAVTVQTLMAYVTKDKSWAVWLAVAYIVGGTFNHMMMMAMHELSHNLGFKKPVYNRILSLIANMPMGVPAAISFKRYHMEHHRYQGEDGVDVDIPTVLEGKIFNNKITKLIFVFTQAFFYSLRPLFVNPKTPGFWEFVNYASCIAYNYAIYHFCGASGLGYCLASTVLG 227
BLAST of EWM30097.1 vs. NCBI_GenBank
Match: gi|695411733|ref|XP_009525556.1| (fatty acid desaturase family, Zn-binding site [Phytophthora sojae] >gi|348676681|gb|EGZ16498.1| fatty acid desaturase family, Zn-binding site [Phytophthora sojae]) HSP 1 Score: 220.32 bits (560), Expect = 2.073e-65 Identity = 102/209 (48.80%), Postives = 142/209 (67.94%), Query Frame = 0 Query: 111 DFFRSYTDEPHKSRREAILKAHPEIRKLFGHCPWTKYKAAAIISTQVMAAVVLRHAPFPLLLFLTYTLSGSCNHFLTLIMHEVAHNLAFKRLFANRVFSIIVNLPLGIPAAISFKRYHMEHHKYQGDETVDVDLPTDVEGKLFRGGPLKLLFVFLMPAFYSLRPLFVRPKKPSNWELVNVLAQLTFDALIFYILGWKSLFYLVVGTLLG 319 DF + TDEPH +RR+ I+ +PE++KLFGHC TKY A ++ Q A+ ++ +P+ +FL Y + G+ NH + L MHEV+HNLAFK+ F N++ I NLP+G+P+++SFKRYH+EHH+YQG++ VDVDLPT+ EGK+F KLLFV FY RPL V PK P WE N A L+++ I+ G+ L YL+VGT+LG Sbjct: 34 DFHWTPTDEPHATRRKLIMAKYPEVKKLFGHCWKTKYIITATVALQTYLALTAQYMSWPVYMFLMYVVGGTANHAMMLGMHEVSHNLAFKKPFHNKLLGIFANLPVGVPSSVSFKRYHLEHHRYQGEDGVDVDLPTEFEGKIFTNKSTKLLFVIFQVFFYGGRPLIVNPKVPGVWEFFNATACLSYNYAIYVFGGFSGLLYLLVGTMLG 242
BLAST of EWM30097.1 vs. NCBI_GenBank
Match: gi|813149925|ref|XP_012200609.1| (hypothetical protein SPRG_06402 [Saprolegnia parasitica CBS 223.65] >gi|641534604|gb|KDO28543.1| hypothetical protein SPRG_06402 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 216.468 bits (550), Expect = 4.502e-64 Identity = 101/209 (48.33%), Postives = 132/209 (63.16%), Query Frame = 0 Query: 111 DFFRSYTDEPHKSRREAILKAHPEIRKLFGHCPWTKYKAAAIISTQVMAAVVLRHAPFPLLLFLTYTLSGSCNHFLTLIMHEVAHNLAFKRLFANRVFSIIVNLPLGIPAAISFKRYHMEHHKYQGDETVDVDLPTDVEGKLFRGGPLKLLFVFLMPAFYSLRPLFVRPKKPSNWELVNVLAQLTFDALIFYILGWKSLFYLVVGTLLG 319 DF DEPH +RR+ I +P+I+ LFG CP TKY+ A +S QV + + + Y + G+ NH + L MHE+AHNL FK++ NR+ S++ N PLG+PAAISFKRYHMEHH+YQG++ VDVD+PT EGK F K LFV FYSLRPL V PK P WE +N + + F++ I+Y GW L YL + TLLG Sbjct: 18 DFTWDTNDEPHATRRKLISAKYPQIKSLFGPCPRTKYQVAVAVSLQVAMTFYVHDKSWATYVAAAYVIGGTINHMMMLAMHELAHNLGFKKMLYNRLLSLLANAPLGVPAAISFKRYHMEHHRYQGEDGVDVDIPTVAEGKFFTTRFRKFLFVCCQSLFYSLRPLLVNPKAPGLWEFINYASCIAFNSFIYYFCGWSGLCYLFLSTLLG 226
BLAST of EWM30097.1 vs. NCBI_GenBank
Match: gi|1036678940|ref|XP_016998725.1| (PREDICTED: sphingolipid delta(4)-desaturase DES1 [Drosophila takahashii]) HSP 1 Score: 215.312 bits (547), Expect = 7.019e-64 Identity = 105/211 (49.76%), Postives = 144/211 (68.25%), Query Frame = 0 Query: 111 DFFRSYTDEPHKSRREAILKAHPEIRKLFGHCPWTKYKAAAIISTQVMAAVVLRHAPFPLLLFLTYTLSGSCNHFLTLIMHEVAHNLAF--KRLFANRVFSIIVNLPLGIPAAISFKRYHMEHHKYQGDETVDVDLPTDVEGKLFRGGPLKLLFVFLMPAFYSLRPLFVRPKKPSNWELVNVLAQLTFDALIFYILGWKSLFYLVVGTLLG 319 DF YT+EPH SRR+ IL+ +P+I+KLFGH P K+ A A++ TQ++A V++ P+ LL Y G NH L L +HE++HNLAF R NR+ I NLP+G+P +ISFK+YH+EHH+YQGDE +D D+PT +E +LF K L+V L P FY RPL + PK P+ E++N + QLTF+ALI Y LGWK L YL++G++L Sbjct: 9 DFEWVYTEEPHASRRKLILEKYPQIKKLFGHDPNFKWVAGAMVLTQILALFVVKDLPWSWLLVAAYCFGGIINHSLMLAVHEISHNLAFGHSRPLHNRILGFICNLPIGLPMSISFKKYHLEHHRYQGDEAIDTDIPTLLEARLFDTTFGKFLWVCLQPFFYIFRPLVINPKPPTRLEIINTVVQLTFNALIVYFLGWKPLAYLLIGSILA 219 The following BLAST results are available for this feature:
BLAST of EWM30097.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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