|
Properties
Property Name | Value |
Product | amino acid permease family protein |
Orig transcript id | gnl|cribi|Naga_100003g17.1779.mrna |
Orig protein id | gnl|cribi|Naga_100003g17.1779 |
Gbkey | mRNA |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
CM002455.1 | supercontig | CM002455.1:1149733..1152680 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna461 ID=rna461|Name=rna461|organism=Nannochloropsis gaditana|type=mRNA|length=2467bp GCATCCCCCAGTGCCCCAGCCTCAACTCTTTCCGGGGTTGCATGTCCAAT TCTGTTGTCTCAAGCCCCAAGTCCTCACGTCTCAACGGTCCACGGAGCTA CAGGCTCGGCGTCTTGCGATTGACAGCCGGCGCGGGAGCGTTCTCATGTC CCTTTTGGTCTGACGTGCGCTTTGAGCTCTCCGACCACGGGAGGAGGATC AAGCAGAGATGCGCGTTTTGCCGTTGCGGGAAAGGCAACTCGGTGTCTCG TGTATACGACGGATCTCCACCAGAGCGCTTGATTTCCTGGGTGTCGGGCT TATTCTTGCGTCACTGCTGCCCGTGTATAGTTGTGCGTCCCCACATCGGT CTCGAGGTTTTCTTTTTATTACAACTTCGACCGCTTCGGCCACAGCGTCG TCATCATACAAGTTCTACACATCGCAGCTATTCGGGCGTAAAAAGGCGGG ACGAACCAAAGGGGATTGCGCAGATGATGGCCTCCCCGGGGGCTCCAGCC TGGAGAAGACGACCGCGCCGTTCTCTCTCTCCGACGCTCACGTCGCCTCC GCCACTGCCACGTCCACCATCACCAGTCTGATCGGTCGAAGTGATAAGGT CGAAGTTCTACGCACCATCGAGTCCCTCCCTTCCATCTGTTTGGACGGCG TCACGGTGGCGGCGGCTTGGGATCGGCTGGCGCAACGGACAGTGCCCGCC GGTCCCCGGGCCCCCCACTTGCCCCCCCTTCACAACGACCGCGCGTTCCA CATGCTTTTGGAGCGGACCCGAGCGCTTCTCCCAGACCTGTCGCCCGGGC ACTGTGCGGCGGTCGTCGGCAACTTGGCCAAGCTGCGGTACCGGCCGGAC GACTCTTTTCTCTCCGCGCTTCTATTCTCATGCCGCAGCCGCGCAGAGGC GCAGACCTTCGGACAGGCGGCCCATTTGATTTCAGGCCTGGCGCGATTGG ACTATGATTTCAAAGAGGACGAGCTGGGGCGCCTGGCTTGCTTGATGGAG GAGCGGTTGTTGACCATGGAGAAGGACACGTTGCACCCCGAATCGCTCTC GATGGGTCTGTGGGCGCTCGCGGTCCTGGGCCCGCTGGGAGACCCGAGTC GTGAAAAATTACGGCACTGGCTCGTGGAAGCGGCGATCGACCGACTGGCG AGCGCTCATGCGGAAGCCACCGCAGCGGGATTCGGGCAAGGTCCTGTGCT TTCGGAGGGCAAGGCGAAGAACTTGGTGCGGATCTGTCGGTTGCTTCGGA CCGCTTTGCTCTTTCTTTCCGACCCGGAGGTAGGACAGTCTGGAAAGAAG GCGAGTGGGACGTCTGGTGGCTGGGAAGGGAAGGAGGTGGGAGAGGGGAG GCGCGCTGCCAAGACACCCTCGCTCGCGTCTGTTTCTCGCCCTGCCCCTG CCTTGAGCCCTTGCTACCCCCTGGCGGTGTCAAATGACGACCTGAATTTG TCCGCCTTCGCAAAGCTTCGCCTGTGCGTGGACCAAGTCTGGCTGGATCT GGGCGCCTGGGTGGACCCTGTGCGGTCCTCCCGGTTGCAGATGGAGGTGG AATCGACCCTCCGCTACGGAGGCGCCTATTGTACCGGGGAGTGGGAGGAC GAGGTGGTGACCGTGGACGTGGCGCTGCACCCTCGGCCAATGAGTGGTAG CGAAGACGCGGAGGGCGCGCGGGAGGACAGGAGGGGGGGAAGGAGGGTGC GACCAGTGGCCTTGGAAGTGGACGGACCGTCCCACTTCTTTGTGAACCAG CCGCAGCGCCCGACGGGGGACACCAAGATCAAGCACCAGGCCCTGCACCT GGGAGGGCAGTGGTCCGCCGTCATCTCCTTGGCGCATTTCGAGTGGCCCA AGTCGAGCAAGCAGCAGTTGGCGGTTCTTAAAAAGAAGATTGCGCAGACA GGCTTGGAGCCGAAAGACTTTTTCCGGTGAGGAAGGGGCAGTCATGTAGC CCTAGTTATTATATGTACTCCAGGAAATACAATTTTGACGTACGTGCAAG CATAAATTATATATATCCGAAAGAACTTGACACTGCACGGTGTTAATATT GGTTGTAGGCAGCTGGAACCTCGGACCGCGGTAGCAAAATTTATACATAA CCGTAACTTTTTTTTTGGAAGAACTGTTCAAAATGGCCGAGCCATTATTT TTATCGAAATGCCAATTTTCCGGACAAAGCAAGCTACGCAGAAAGGAGTT TACGGCCCTCACTTAGGAGCGAAAAGTACACCTGTTGAACGCAAAAAATA GAAACTCATTGTCAAGGCTCAAGTTGGGTGAGCGTAGTTCTTGTGGCAAC CAGCAGCCATCTCAAACGCGTATAAGATCTGTTGCTCTCATTCATGGCAC AAGCCATCCGCTTTCAAAATACTGAACTTCATACACAATATGCGCAGCCG GGTAAAGTCTAAATTCCCTCTCTACGTGCCTCCAGCCTTTACGTTATCCT CCGTACATGGTGGTATC back to topprotein sequence of rna461 >rna461-protein ID=rna461-protein|Name=rna461|organism=Nannochloropsis gaditana|type=polypeptide|length=696bp MARTTQQNSNESANLLPASSHTYNGNGNTSSISITQAKARGLRNKHFPGL GTYDEHIHVDDVQLSKAAHALERQNHPHEMLGPWMASSICGNDILSSCFY SIGLVTSYAGQLAPLCFLLVGLILYLFRSVYGEAITAIPVNGGTYTLLIN TTSKAVAAAAACLSVLAYIATGVVSAVTACNYLHAVLPDLIDVPIAACCL LSLFALVVGMGLKESAGVAMVICAVHVLTFFVLLSLGFLYVIFNNLGELP ANLLLPFPDVAVTTAKNGGEIEGAVGAVGEDMLPGSIGTALIFGCAAGLL GVSGFETSSQYVESQKPGVFLLTLKYMQQAVCVFNPLLSLLSIAVLPVPV ITAFSQTVLERVAHTIGDWVQATLGLGPHTGPGSTVDFGKFLRIWVSLDA FVVLSGAVLTAYVGIDGLLYSMSMDGCLPSFLLARNAWRGTDHYIILSYL ALAISQVLLTGGDVEALAGVYAFSFLGVMALFAAGCAMLKVKRSQLPRDV VAPWSHVIGGGAAVLLAFLVNLQSQSEYLLYFLLYLAGVGMLTFLMFQRV RLLKVLIYFSPPSVAALLVEKLLALRSDRVVFFCKDPKDLYILNKALTYV RANESTVHHVTVVHCRGEGVGQEDGEGKAGAKAVEMIDRMYPAIRVSMVQ VHRAFTPEVVEALSKILDVGREHMFISCPDGKHPIDKLRGVRVITH back to topmRNA from alignment at CM002455.1:1149733..1152680- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna461 ID=rna461|Name=rna461|organism=Nannochloropsis gaditana|type=mRNA|length=2948bp|location=Sequence derived from alignment at CM002455.1:1149733..1152680- (Nannochloropsis gaditana) AGCTCCTTCGCTTCAGGGACGTGGTTACCACGACAAACATCACTCACAAG
CCACCTCATATCGCGGAACAAAAGGAAAAAGCAACCCTCCCGACGACCCA
GACCGCCGCTGGTTTTCGATAACAGAATTTCATTTACGACCTTATCACAT
CACATCGGTGCCCACGAACACTAAAATTCGGATTTCTAATGCACATTCAC
TAGCTTGATGGTCAAATTGTTGGAAAAGGCGTATTATAGCGGACGACTCG
GAGCAAGTCGCTGCTAAAGCCCGCTTTTGTCGTACATGCATGATCGGAAG
CTATGGCAAGAACAACTCAGCAGAATTCGAACGAGTCCGCGAATCTGTTA
CCTGCAAGCTCTCACACATACAATGGGAATGGGAACACGTCTTCCATCAG
CATCACACAAGCCAAAGCCCGAGGCTTGAGAAACAAGCACTTTCCCGGCC
TCGGGACTTACGATGAACACATTCATGTCGACGACGTCCAACTCTCCAAA
GCAGCGCATGCTCTGGAAAGGCAAAACCATCCGCACGAAATGCTAGGACC
ATGGATGGCTTCCTCGATTTGCGGTAATGATATTCTCAGCTCTTGCTTTT
ACTCCATTGGCCTGGTGACAAGTTACGCAGGGCAGCTTGCCCCCCTCTGT
TTTTTATTAGTGGGCCTTATCTTGTACCTTTTCCGGTCTGTGTACGGGGA
GGCCATAACGGCCATTCCTGTCAATGGTGGAACCTACACCCTCCTAATCA
ACACCACCTCAAAAGCCGTGGCTGCCGCCGCCGCTTGTCTGAGCGTGCTG
GCCTACATAGCCACCGGGGTGGTGTCGGCGGTGACGGCATGCAACTACCT
GCACGCAGTACTGCCCGACTTGATCGACGTCCCGATCGCCGCCTGTTGCC
TCCTTTCTCTGTTCGCGCTGGTGGTGGGGATGGGGCTGAAGGAGAGCGCA
GGGGTCGCGATGGTTATATGCGCCGTGCACGTCCTCACTTTCTTCGTCCT
CCTTAGCCTTGGTTTTCTGTACGTGATTTTCAACAATTTGGGCGAGCTAC
CCGCCAACCTTCTGCTGCCCTTTCCTGATGTAGCTGTCACGACCGCAAAG
AATGGAGGGGAGATCGAAGGCGCTGTGGGGGCCGTGGGCGAGGACATGCT
GCCAGGGAGCATTGGGACCGCGCTCATCTTCGGCTGTGCCGCCGGGCTCT
TGGGTGTGAGTGGTTTTGAGACATCGTCGCAGTACGTGGAGAGCCAGAAG
CCAGGAGTCTTTCTCCTTACTCTGAAGTACATGCAGCAAGCCGTCTGTGT
CTTCAACCCCCTGCTTTCCCTCCTCTCCATCGCCGTCCTGCCCGTCCCTG
TCATCACCGCCTTTTCTCAAACGGTCCTTGAAAGAGTCGCTCACACCATA
GGCGACTGGGTACAGGCCACCCTGGGGCTGGGTCCACACACCGGTCCGGG
TAGCACAGTGGATTTCGGGAAGTTTTTGCGGATATGGGTGTCCTTAGACG
CATTCGTGGTCTTAAGCGGGGCGGTTTTGACGGCCTACGTGGGCATCGAC
GGTCTACTTTACAGCATGAGCATGGATGGCTGCCTGCCCTCGTTTTTGTT
GGCCCGTAATGCTTGGCGTGGGACGGACCATTACATCATTCTCTCGTACT
TGGCGTTGGCCATCAGTCAGGTACGGGCACGTCAGACGTCGGGGGGAGGA
ATTGTGACACGATTATGGCAGAGCTTGAAAGTCCGAAGAAAATATCGCCT
GAAGTTTTGAAGACAATGTCCAAGATTTAGTAAGATTTTGTGTGCTTATC
ACTCGTCCGTTGAAGGTGAGCTCCATAACATTTTCCTGCTCCTTCCGATC
CAGGTGCTCCTCACGGGAGGGGACGTGGAGGCCCTTGCCGGAGTCTACGC
CTTTTCTTTTCTAGGGGTGATGGCTCTTTTTGCGGCCGGGTGTGCCATGC
TGAAAGTCAAGCGCTCACAGCTCCCCCGCGACGTGGTGGCGCCCTGGTCC
CACGTGATCGGAGGGGGGGCGGCTGTCCTTCTTGCCTTCCTTGTCAACCT
GCAAAGCCAGTCAGAATACCTGCTGTACTTCCTCTTGTACCTCGCAGGGG
TAGGCATGCTGACTTTTCTCATGTTCCAACGCGTGAGACTGCTCAAAGTC
CTGATCTACTTCTCCCCTCCGTCCGTCGCAGCCCTGCTTGTGGAAAAATT
GCTGGCGCTGCGGTCAGACCGCGTGGTCTTCTTCTGCAAGGACCCCAAAG
ACCTCTACATTCTTAACAAAGCGCTCACCTATGTCCGAGCCAACGAAAGC
ACTGTCCACCACGTGACAGTGGTGCACTGCCGCGGGGAGGGAGTGGGACA
AGAGGATGGGGAGGGTAAGGCGGGTGCAAAGGCAGTAGAGATGATCGACC
GCATGTATCCAGCCATTCGGGTCAGCATGGTGCAGGTACATCGGGCCTTC
ACTCCAGAGGTGGTGGAAGCGCTGTCTAAGATCTTAGATGTGGGAAGAGA
GCACATGTTCATATCATGTCCTGACGGGAAGCATCCGATTGACAAGCTGC
GGGGTGTGCGCGTGATTACTCATTGATACCACCATGTACGGAGGATAACG
TAAAGGCTGGAGGCACGTAGAGAGGGAATTTAGACTTTACCCGGCTGCGC
ATATTGTGTATGAAGTTCAGTATTTTGAAAGCGGATGGCTTGTGCCATGA
ATGAGAGCAACAGATCTTATACGCGTTTGAGATGGCTGCTGGTTGCCACA
AGAACTACGCTCACCCAACTTGAGCCTTGACAATGAGTTTCTATTTTTTG
CGTTCAACAGGTGTACTTTTCGCTCCTAAGTGAGGGCCGTAAACTCCTTT
CTGCGTAGCTTGCTTTGTCCGGAAAATTGGCATTTCGATAAAAATAATGG
CTCGGCCATTTTGAACAGTTCTTCCAAAAAAAAAGTTACGGTTATGTA back to topCoding sequence (CDS) from alignment at CM002455.1:1149733..1152680- >rna461 ID=rna461|Name=rna461|organism=Nannochloropsis gaditana|type=CDS|length=4182bp|location=Sequence derived from alignment at CM002455.1:1149733..1152680- (Nannochloropsis gaditana) GTGCTCCTCACGGGAGGGGACGTGGAGGCCCTTGCCGGAGTCTACGCCTT TTCTTTTCTAGGGGTGATGGCTCTTTTTGCGGCCGGGTGTGCCATGCTGA AAGTCAAGCGCTCACAGCTCCCCCGCGACGTGGTGGCGCCCTGGTCCCAC GTGATCGGAGGGGGGGCGGCTGTCCTTCTTGCCTTCCTTGTCAACCTGCA AAGCCAGTCAGAATACCTGCTGTACTTCCTCTTGTACCTCGCAGGGGTAG GCATGCTGACTTTTCTCATGTTCCAACGCGTGAGACTGCTCAAAGTCCTG ATCTACTTCTCCCCTCCGTCCGTCGCAGCCCTGCTTGTGGAAAAATTGCT GGCGCTGCGGTCAGACCGCGTGGTCTTCTTCTGCAAGGACCCCAAAGACC TCTACATTCTTAACAAAGCGCTCACCTATGTCCGAGCCAACGAAAGCACT GTCCACCACGTGACAGTGGTGCACTGCCGCGGGGAGGGAGTGGGACAAGA GGATGGGGAGGGTAAGGCGGGTGCAAAGGCAGTAGAGATGATCGACCGCA TGTATCCAGCCATTCGGGTCAGCATGGTGCAGGTACATCGGGCCTTCACT CCAGAGGTGGTGGAAGCGCTGTCTAAGATCTTAGATGTGGGAAGAGAGCA CATGTTCATATCATGTCCTGACGGGAAGCATCCGATTGACAAGCTGCGGG GTGTGCGCGTGATTACTCATTGAATGGCAAGAACAACTCAGCAGAATTCG AACGAGTCCGCGAATCTGTTACCTGCAAGCTCTCACACATACAATGGGAA TGGGAACACGTCTTCCATCAGCATCACACAAGCCAAAGCCCGAGGCTTGA GAAACAAGCACTTTCCCGGCCTCGGGACTTACGATGAACACATTCATGTC GACGACGTCCAACTCTCCAAAGCAGCGCATGCTCTGGAAAGGCAAAACCA TCCGCACGAAATGCTAGGACCATGGATGGCTTCCTCGATTTGCGGTAATG ATATTCTCAGCTCTTGCTTTTACTCCATTGGCCTGGTGACAAGTTACGCA GGGCAGCTTGCCCCCCTCTGTTTTTTATTAGTGGGCCTTATCTTGTACCT TTTCCGGTCTGTGTACGGGGAGGCCATAACGGCCATTCCTGTCAATGGTG GAACCTACACCCTCCTAATCAACACCACCTCAAAAGCCGTGGCTGCCGCC GCCGCTTGTCTGAGCGTGCTGGCCTACATAGCCACCGGGGTGGTGTCGGC GGTGACGGCATGCAACTACCTGCACGCAGTACTGCCCGACTTGATCGACG TCCCGATCGCCGCCTGTTGCCTCCTTTCTCTGTTCGCGCTGGTGGTGGGG ATGGGGCTGAAGGAGAGCGCAGGGGTCGCGATGGTTATATGCGCCGTGCA CGTCCTCACTTTCTTCGTCCTCCTTAGCCTTGGTTTTCTGTACGTGATTT TCAACAATTTGGGCGAGCTACCCGCCAACCTTCTGCTGCCCTTTCCTGAT GTAGCTGTCACGACCGCAAAGAATGGAGGGGAGATCGAAGGCGCTGTGGG GGCCGTGGGCGAGGACATGCTGCCAGGGAGCATTGGGACCGCGCTCATCT TCGGCTGTGCCGCCGGGCTCTTGGGTGTGAGTGGTTTTGAGACATCGTCG CAGTACGTGGAGAGCCAGAAGCCAGGAGTCTTTCTCCTTACTCTGAAGTA CATGCAGCAAGCCGTCTGTGTCTTCAACCCCCTGCTTTCCCTCCTCTCCA TCGCCGTCCTGCCCGTCCCTGTCATCACCGCCTTTTCTCAAACGGTCCTT GAAAGAGTCGCTCACACCATAGGCGACTGGGTACAGGCCACCCTGGGGCT GGGTCCACACACCGGTCCGGGTAGCACAGTGGATTTCGGGAAGTTTTTGC GGATATGGGTGTCCTTAGACGCATTCGTGGTCTTAAGCGGGGCGGTTTTG ACGGCCTACGTGGGCATCGACGGTCTACTTTACAGCATGAGCATGGATGG CTGCCTGCCCTCGTTTTTGTTGGCCCGTAATGCTTGGCGTGGGACGGACC ATTACATCATTCTCTCGTACTTGGCGTTGGCCATCAGTCAGGTGCTCCTC ACGGGAGGGGACGTGGAGGCCCTTGCCGGAGTCTACGCCTTTTCTTTTCT AGGGGTGATGGCTCTTTTTGCGGCCGGGTGTGCCATGCTGAAAGTCAAGC GCTCACAGCTCCCCCGCGACGTGGTGGCGCCCTGGTCCCACGTGATCGGA GGGGGGGCGGCTGTCCTTCTTGCCTTCCTTGTCAACCTGCAAAGCCAGTC AGAATACCTGCTGTACTTCCTCTTGTACCTCGCAGGGGTAGGCATGCTGA CTTTTCTCATGTTCCAACGCGTGAGACTGCTCAAAGTCCTGATCTACTTC TCCCCTCCGTCCGTCGCAGCCCTGCTTGTGGAAAAATTGCTGGCGCTGCG GTCAGACCGCGTGGTCTTCTTCTGCAAGGACCCCAAAGACCTCTACATTC TTAACAAAGCGCTCACCTATGTCCGAGCCAACGAAAGCACTGTCCACCAC GTGACAGTGGTGCACTGCCGCGGGGAGGGAGTGGGACAAGAGGATGGGGA GGGTAAGGCGGGTGCAAAGGCAGTAGAGATGATCGACCGCATGTATCCAG CCATTCGGGTCAGCATGGTGCAGGTACATCGGGCCTTCACTCCAGAGGTG GTGGAAGCGCTGTCTAAGATCTTAGATGTGGGAAGAGAGCACATGTTCAT ATCATGTCCTGACGGGAAGCATCCGATTGACAAGCTGCGGGGTGTGCGCG TGATTACTCATTGAATGGCAAGAACAACTCAGCAGAATTCGAACGAGTCC GCGAATCTGTTACCTGCAAGCTCTCACACATACAATGGGAATGGGAACAC GTCTTCCATCAGCATCACACAAGCCAAAGCCCGAGGCTTGAGAAACAAGC ACTTTCCCGGCCTCGGGACTTACGATGAACACATTCATGTCGACGACGTC CAACTCTCCAAAGCAGCGCATGCTCTGGAAAGGCAAAACCATCCGCACGA AATGCTAGGACCATGGATGGCTTCCTCGATTTGCGGTAATGATATTCTCA GCTCTTGCTTTTACTCCATTGGCCTGGTGACAAGTTACGCAGGGCAGCTT GCCCCCCTCTGTTTTTTATTAGTGGGCCTTATCTTGTACCTTTTCCGGTC TGTGTACGGGGAGGCCATAACGGCCATTCCTGTCAATGGTGGAACCTACA CCCTCCTAATCAACACCACCTCAAAAGCCGTGGCTGCCGCCGCCGCTTGT CTGAGCGTGCTGGCCTACATAGCCACCGGGGTGGTGTCGGCGGTGACGGC ATGCAACTACCTGCACGCAGTACTGCCCGACTTGATCGACGTCCCGATCG CCGCCTGTTGCCTCCTTTCTCTGTTCGCGCTGGTGGTGGGGATGGGGCTG AAGGAGAGCGCAGGGGTCGCGATGGTTATATGCGCCGTGCACGTCCTCAC TTTCTTCGTCCTCCTTAGCCTTGGTTTTCTGTACGTGATTTTCAACAATT TGGGCGAGCTACCCGCCAACCTTCTGCTGCCCTTTCCTGATGTAGCTGTC ACGACCGCAAAGAATGGAGGGGAGATCGAAGGCGCTGTGGGGGCCGTGGG CGAGGACATGCTGCCAGGGAGCATTGGGACCGCGCTCATCTTCGGCTGTG CCGCCGGGCTCTTGGGTGTGAGTGGTTTTGAGACATCGTCGCAGTACGTG GAGAGCCAGAAGCCAGGAGTCTTTCTCCTTACTCTGAAGTACATGCAGCA AGCCGTCTGTGTCTTCAACCCCCTGCTTTCCCTCCTCTCCATCGCCGTCC TGCCCGTCCCTGTCATCACCGCCTTTTCTCAAACGGTCCTTGAAAGAGTC GCTCACACCATAGGCGACTGGGTACAGGCCACCCTGGGGCTGGGTCCACA CACCGGTCCGGGTAGCACAGTGGATTTCGGGAAGTTTTTGCGGATATGGG TGTCCTTAGACGCATTCGTGGTCTTAAGCGGGGCGGTTTTGACGGCCTAC GTGGGCATCGACGGTCTACTTTACAGCATGAGCATGGATGGCTGCCTGCC CTCGTTTTTGTTGGCCCGTAATGCTTGGCGTGGGACGGACCATTACATCA TTCTCTCGTACTTGGCGTTGGCCATCAGTCAG back to top
|