EWM30213.1, cds446 (CDS) Nannochloropsis gaditana

Overview
NameEWM30213.1
Unique Namecds446
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002455.1:1110662..1113652 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM30213.1
Productnucleolar complex protein 3
Orig transcript idgnl|cribi|Naga_100003g35.1730.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002455.1supercontigCM002455.1:1110662..1113652 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0005488binding
Vocabulary: INTERPRO
TermDefinition
IPR016024ARM-type_fold
IPR011501NOC3p
IPR005612CCAAT-binding_factor
IPR011989ARM-like
Homology
BLAST of EWM30213.1 vs. NCBI_GenBank
Match: gi|585112872|gb|EWM30213.1| (nucleolar complex protein 3 [Nannochloropsis gaditana])

HSP 1 Score: 2030.76 bits (5260), Expect = 0.000e+0
Identity = 996/996 (100.00%), Postives = 996/996 (100.00%), Query Frame = 0
Query:    1 MILYARFIPRFPTPCTVHSCTMKKKAASRDQGRLGRAVPAKKSSLVRRKGPGPGGPGSATPMPEQLPIENDEDDTMEIHEEDRAFVEEHSSFAASFLDADPRSPTPAGSAGKSKRAHTAPEDNNGGVEVPIEQKSMRRKASTLGWNTARGIGHRVVKERLPTKTIDGKLHFRLEEVEEIVEDTQKVNIVVSARKSKEKKDNRGGEVEQGEEKKEEEGEEEEEEEEEEEEEEEEEDVEDDMNVAMHSETSDPEVLGDSRPKNGREAKNRSGSRVVSGQIAAEAESLSVEAFGGDVRAMRRARLELKKTEIATLCEAILENPEGGLLGRSAGGGWRGRGSRMGALLGALEDQDKQVQVWAMASLVAVFRDLAPAYRIRLPTEKELQVKASKEVKRTQEYERVLLASYQAYLKYLERTSHAGRASPSGKPQVSPAGREVRRSVAAKCLCELLTALSHFNFTTSVLTAVIRLGMGPDPLTRTMAGAAVRRLLERDQQGDVSLSATKLICKEMQHRRLQAPEDMLRALHALKLVVKEDEAVEVLRKARVHATKRKSQQLEEKEEDGESEVRTGLREAEARADPELRARCQSESLQEVTILYFRVLKQARKPTLLPAALEGLSRVAHLINLDTVVDVLEVLKDMLDPTRNLPLGASLHAVLTALRTLQGPGRELRVDDKAFLTFLYQLLGRVGMGLAADSHQDEKRTDARSGVTIFPLLVTCLRKALLERREFSLARVAAFYKRLLGLALQLTSPQESQVVLGIVKELPTRYPGLEQMLDGETDRVAMGVYRPDAVEPEMSNPLASGAWELSLLKVHHFHAGVRRAATEAITAATAAAASTQTATPWSSSSFRVRDYFNKAGKGLEKEVAMDDHWDFLKLGFGGMFTQLPRLNPLHAMIRRAAREKRGQRTRLYFIERYGNVGASEGEGRDYKSQFWGESTHSRQSLNEDLKRTENVSFQKYFRDTRAHKRKLSLCRELQRSRAILKMYASRHSQGKQAALN 996
            MILYARFIPRFPTPCTVHSCTMKKKAASRDQGRLGRAVPAKKSSLVRRKGPGPGGPGSATPMPEQLPIENDEDDTMEIHEEDRAFVEEHSSFAASFLDADPRSPTPAGSAGKSKRAHTAPEDNNGGVEVPIEQKSMRRKASTLGWNTARGIGHRVVKERLPTKTIDGKLHFRLEEVEEIVEDTQKVNIVVSARKSKEKKDNRGGEVEQGEEKKEEEGEEEEEEEEEEEEEEEEEDVEDDMNVAMHSETSDPEVLGDSRPKNGREAKNRSGSRVVSGQIAAEAESLSVEAFGGDVRAMRRARLELKKTEIATLCEAILENPEGGLLGRSAGGGWRGRGSRMGALLGALEDQDKQVQVWAMASLVAVFRDLAPAYRIRLPTEKELQVKASKEVKRTQEYERVLLASYQAYLKYLERTSHAGRASPSGKPQVSPAGREVRRSVAAKCLCELLTALSHFNFTTSVLTAVIRLGMGPDPLTRTMAGAAVRRLLERDQQGDVSLSATKLICKEMQHRRLQAPEDMLRALHALKLVVKEDEAVEVLRKARVHATKRKSQQLEEKEEDGESEVRTGLREAEARADPELRARCQSESLQEVTILYFRVLKQARKPTLLPAALEGLSRVAHLINLDTVVDVLEVLKDMLDPTRNLPLGASLHAVLTALRTLQGPGRELRVDDKAFLTFLYQLLGRVGMGLAADSHQDEKRTDARSGVTIFPLLVTCLRKALLERREFSLARVAAFYKRLLGLALQLTSPQESQVVLGIVKELPTRYPGLEQMLDGETDRVAMGVYRPDAVEPEMSNPLASGAWELSLLKVHHFHAGVRRAATEAITAATAAAASTQTATPWSSSSFRVRDYFNKAGKGLEKEVAMDDHWDFLKLGFGGMFTQLPRLNPLHAMIRRAAREKRGQRTRLYFIERYGNVGASEGEGRDYKSQFWGESTHSRQSLNEDLKRTENVSFQKYFRDTRAHKRKLSLCRELQRSRAILKMYASRHSQGKQAALN
Sbjct:    1 MILYARFIPRFPTPCTVHSCTMKKKAASRDQGRLGRAVPAKKSSLVRRKGPGPGGPGSATPMPEQLPIENDEDDTMEIHEEDRAFVEEHSSFAASFLDADPRSPTPAGSAGKSKRAHTAPEDNNGGVEVPIEQKSMRRKASTLGWNTARGIGHRVVKERLPTKTIDGKLHFRLEEVEEIVEDTQKVNIVVSARKSKEKKDNRGGEVEQGEEKKEEEGEEEEEEEEEEEEEEEEEDVEDDMNVAMHSETSDPEVLGDSRPKNGREAKNRSGSRVVSGQIAAEAESLSVEAFGGDVRAMRRARLELKKTEIATLCEAILENPEGGLLGRSAGGGWRGRGSRMGALLGALEDQDKQVQVWAMASLVAVFRDLAPAYRIRLPTEKELQVKASKEVKRTQEYERVLLASYQAYLKYLERTSHAGRASPSGKPQVSPAGREVRRSVAAKCLCELLTALSHFNFTTSVLTAVIRLGMGPDPLTRTMAGAAVRRLLERDQQGDVSLSATKLICKEMQHRRLQAPEDMLRALHALKLVVKEDEAVEVLRKARVHATKRKSQQLEEKEEDGESEVRTGLREAEARADPELRARCQSESLQEVTILYFRVLKQARKPTLLPAALEGLSRVAHLINLDTVVDVLEVLKDMLDPTRNLPLGASLHAVLTALRTLQGPGRELRVDDKAFLTFLYQLLGRVGMGLAADSHQDEKRTDARSGVTIFPLLVTCLRKALLERREFSLARVAAFYKRLLGLALQLTSPQESQVVLGIVKELPTRYPGLEQMLDGETDRVAMGVYRPDAVEPEMSNPLASGAWELSLLKVHHFHAGVRRAATEAITAATAAAASTQTATPWSSSSFRVRDYFNKAGKGLEKEVAMDDHWDFLKLGFGGMFTQLPRLNPLHAMIRRAAREKRGQRTRLYFIERYGNVGASEGEGRDYKSQFWGESTHSRQSLNEDLKRTENVSFQKYFRDTRAHKRKLSLCRELQRSRAILKMYASRHSQGKQAALN 996          
BLAST of EWM30213.1 vs. NCBI_GenBank
Match: gi|1210517814|dbj|GAX23215.1| (nucleolar complex protein 3 [Fistulifera solaris])

HSP 1 Score: 325.479 bits (833), Expect = 5.103e-96
Identity = 211/528 (39.96%), Postives = 300/528 (56.82%), Query Frame = 0
Query:  309 IATLCEAILENPEGGLLGRSAGGGWRGRGSRMGALLGALEDQDKQVQVWAMASLVAVFRDLAPAYRIRLPTEKELQVKASKEVKRTQEYERVLLASYQAYLKYLERTSHAGRASPSGKPQVSPAGREVRRSVAAKCLCELLTALSHFNFTTSVLTAVIR-LGMGPDPLTRTMAGAAVRRLLERDQQGDVSLSATKLICKEMQHRRLQAPEDMLRALHALKLVVKEDEAVEVLRKARVHATKRKSQQLEEKEEDGESEVRTGLREAEARADPELRARCQSESLQEVTILYFRVLK-----QARKPT---LLPAALEGLSRVAHLINLDTVVDVLEVLKDMLDPTRNLPLGASLHAVLTALRTLQGPGRELRVDDKAFLTFLYQLLGRVGMGLAADSHQDEKRTDARSGVTIFPLLVTCLRKALLERREFSLARVAAFYKRLLGLALQLTSPQESQVVLGIVKELPTRYPGLEQMLDGETDRV-AMGVYRPDAVEPEMSNPLASGAWELSLLKVHHFHAGVRRAATEAIT 826
            IA L E+ILENP+G   G SAG       S+M  LL   + +D+ V   A+ SL+A+F+D+ PAYRIRLPTE+E  V  SKE K+T EYER LL+ YQ YL+ LE+  +    SP    QV+              LCELL+    FNF +++L AV+R +  G   +       AV  +   D QG V+  A +++ K +Q+  +  P  ++R+  AL L V  DEA      A++    RK  + ++KE    + +   L+E+EA  D  + AR Q+++L+ V + YFR+LK      ARK T   +L AALEGL++ AHLIN++TV+D+L VLKD+L     LPL ASL+ +LTA +TLQGPG+EL++D K ++  LY  L R+              TD      +  L + CL  AL +RREFS ARVAAF+K++  +AL L  P  S  ++   + L  RY  ++ +L+ + D V A G Y P A++PE SNP ++ AWEL+LLK  HF   V   A  A T
Sbjct:   38 IAELSESILENPQGAF-GSSAGP------SKMSQLLSLTQHKDEYVAKLAVVSLLALFKDILPAYRIRLPTEQESAVLVSKETKQTWEYERNLLSHYQQYLQVLEKKWNQSTQSPPSSLQVT----------CMLSLCELLSTAYTFNFRSNLLAAVVRHMNTGISSVVAEACCKAVETVFREDAQGQVAEEAARMVAKVIQNAPIVRPR-VVRSFAALPLKVHADEAT----AAKLLQQSRKRHKKKDKE---TAAIEAELKESEATVDKAVLARSQAQTLEVVILAYFRILKSCANSSARKSTRDDILCAALEGLAKFAHLINMETVMDLLAVLKDLLREVDTLPLDASLNCILTAFQTLQGPGKELKIDLKEYILPLYTQLPRLCFF---------HDTDEEGSQNVLDLTLKCLDTALCKRREFSAARVAAFFKQITSVALHL-PPASSIPLIAFARNLLQRYTAIQPLLENDEDFVIAAGEYDPLALDPENSNPFSTSAWELALLKF-HFRQDVSHQALAAAT 529          
BLAST of EWM30213.1 vs. NCBI_GenBank
Match: gi|1210530868|dbj|GAX10408.1| (nucleolar complex protein 3 [Fistulifera solaris])

HSP 1 Score: 320.087 bits (819), Expect = 5.232e-94
Identity = 213/562 (37.90%), Postives = 315/562 (56.05%), Query Frame = 0
Query:  309 IATLCEAILENPEGGLLGRSAGGGWRGRGSRMGALLGALEDQDKQVQVWAMASLVAVFRDLAPAYRIRLPTEKELQVKASKEVKRTQEYERVLLASYQAYLKYLERTSHAGRASPSGKPQVSPAGREVRRSVAAKCLCELLTALSHFNFTTSVLTAVIR-LGMGPDPLTRTMAGAAVRRLLERDQQGDVSLSATKLICKEMQHRRLQAPEDMLRALHALKLVVKEDEAVEVLRKARVHATKRKSQQLEEKEEDGESEVRTGLREAEARADPELRARCQSESLQEVTILYFRVLK-----QARKPT---LLPAALEGLSRVAHLINLDTVVDVLEVLKDMLDPTRNLPLGASLHAVLTALRTLQGPGRELRVDDKAFLTFLYQLLGRVGMGLAADSHQDEKRTDARSGVTIFPLLVTCLRKALLERREFSLARVAAFYKRLLGLALQLTSPQESQVVLGIVKELPTRYPGLEQMLDGETDRV-AMGVYRPDAVEPEMSNPLASGAWELSLLKVHHFHAGVRRAATEAITAATAAAASTQTATPWSSSSFRVRDYFNKAGKGLE 860
            IA L E+ILENP+G   G SAG       S+M  LL   + +D+ V   A+ SL+A+F+D+ PAYRIRLPTE+E  V  SKE K+T EYER LL+ YQ YL+ LE+  +    SP    QV+              LCELL+    FNF +++LTAV+R +  G   +       AV  +   D QG V+  A +++ K +Q+  +  P  ++R+  AL L V  DEA      A++    RK  + ++KE    + +   L+E+EA  D  + AR Q+++L+ V + YFR+LK      A++ T   +L AALEGL++ AHLIN++TV+D+L VLKD+L     LPL ASL+ +LTA +TLQGPG+EL++D K ++  LY  L R+        H+    T+      +  L + CL  AL +RREFS  RVAAF+K++  +ALQL  P  S  ++   + L  RY  ++ +L+ + D V A G Y P A++PE S P ++ AWEL+LLK H+     +  + +A+ AAT          P      +   YF++A   +E
Sbjct:   38 IAELSESILENPQGAF-GSSAGP------SKMSQLLSLTQHKDEYVAKLAVVSLLALFKDILPAYRIRLPTEQESAVLVSKETKQTWEYERNLLSHYQQYLQVLEKKWNQSTQSPPSSLQVT----------CMLSLCELLSTAYTFNFRSNLLTAVVRHMNTGLSSVVAEACCKAVETVFREDAQGQVAEEAARMVAKVIQNAPIVRPR-VVRSFAALPLKVHADEAT----AAKLLQQSRKRHKKKDKE---TASIEAELKESEATVDKAVLARSQAQTLEIVILAYFRILKSCANSSAQRSTRDDILCAALEGLAKFAHLINMETVMDLLAVLKDLLREVDTLPLDASLNCILTAFQTLQGPGKELKIDLKEYILPLYTQLPRLCFF-----HE----TNEGGAQNVLDLTLKCLDTALCKRREFSATRVAAFFKQITSVALQL-PPASSIPLIAFARNLLQRYSAIQPLLENDEDFVIATGEYDPLALDPENSYPFSTSAWELALLKFHY----RQDVSHQALAAATLKMLQLPAEGP---DRLKAEKYFDQANLVIE 557          
BLAST of EWM30213.1 vs. NCBI_GenBank
Match: gi|219111751|ref|XP_002177627.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217410512|gb|EEC50441.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 317.775 bits (813), Expect = 2.265e-92
Identity = 207/544 (38.05%), Postives = 295/544 (54.23%), Query Frame = 0
Query:  309 IATLCEAILENPEGGLLG----RSAGGGWRGRG-SRMGALL------------GALEDQDK------QVQVWAMASLVAVFRDLAPAYRIRLPTEKELQVKASKEVKRTQEYERVLLASYQAYLKYLERTSHAGRASPSGKPQVSPAGREVRRSVAAKCLCELLTALSHFNFTTSVLTAVIRLGMGPDPLTRTMAGAAVRRLLERDQQGDVSLSATKLICKEMQHRRLQAPEDMLRALHALKLVVKEDEAVEVLRKARVHATKRKSQQLEEKEEDGESEVRTGLREAEARADPELRARCQSESLQEVTILYFRVLKQ-----ARKPTLLPAALEGLSRVAHLINLDTVVDVLEVLKDMLDPTRNLPLGASLHAVLTALRTLQGPGRELRVDDKAFLTFLYQLLGRVGMGLAADSHQDEKRTDARSGVTIFPLLVTCLRKALLERREFSLARVAAFYKRLLGLALQLTSPQESQVVLGIVKELPTRYPGLEQMLDGETDRVAMGVYRPDAVEPEMSNPLASGAWELSLLKVHHFHAGVRRAATEA 824
            IA L EAILE P+   +       A   +  +G S+M  LL                D D            A  SL+A+FRD+ P+YRI+LPT ++  VK SKE K   +YER LL SYQ YL+ LE    A R +P       P+   V   ++   LCELL +  HFNF +++LT V R    P  +      AA+  +   D QG+V+L AT+L+ K ++ R  +    +LR   +L L V  DEA      A     K++ +  E  E D E      L+E++A+ D  + ARCQSE+LQ VT+ YFR+LK      A   TLLPAALEGL++ AHLIN+DTV+D+L VLKD+L     LPL A+L+ +LTA +TLQGPG+E+ +D K ++  LY  L R+   +    H               P ++ CL  A ++RRE+S  RV+AF+K++L ++L +  P  +  ++   ++L  RYP   QML+ E D +  G Y PD  +PE SNPLA+ AWEL+L K H   + V++A + A
Sbjct:   88 IAELSEAILEQPDKAFISSEIPNPANPRYPKQGPSKMKQLLVLANASVVPRHNNHNTDNDDPSSHSAYTSQLATMSLLAIFRDILPSYRIKLPTTQQAAVKVSKETKVLWDYERALLQSYQEYLQILEHCWDATRTAPH------PSQLGVTSILS---LCELLKSAFHFNFRSNLLTVVSRHTNHPSTVVGDACCAAIAYVFAHDAQGEVALEATRLLAKFVKDRAFKIRPSVLRTFTSLPLRVHVDEAQAAKLAAAA-NAKKRKKDKELAEIDAE------LKESDAKVDKIILARCQSETLQHVTLTYFRILKHDNLQAAHVETLLPAALEGLAKFAHLINIDTVMDLLGVLKDLLKKMNALPLEAALNCILTAFQTLQGPGKEMNIDVKEYIVPLYTQLPRLVGDVNCRRH--------------LPTVLLCLNAAFIKRREYSTIRVSAFWKQILTVSLHV-PPHTAVPLIAFGRQLLQRYPVTHQMLENEQDVITSGEYTPDVEDPEHSNPLATSAWELALAKFHVHLSVVQQAQSTA 600          
BLAST of EWM30213.1 vs. NCBI_GenBank
Match: gi|1072224677|gb|OEU09426.1| (NOC3p-domain-containing protein [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 315.849 bits (808), Expect = 6.342e-92
Identity = 214/595 (35.97%), Postives = 315/595 (52.94%), Query Frame = 0
Query:  255 GDSRPK-NGREA-KNRSGSRVVSGQIAAEAESLSVEAFGGDVRAMRRARLELKKTEIATLCEAILENPEGGLL--------GRSAGGGWRGRGSRMGALLGALED--------QDKQVQVWAMASLVAVFRDLAPAYRIRLPTEKELQVKASKEVKRTQEYERVLLASYQAYLKYLERTSHAGRASPSGKPQVSPAGREVRRSVAAKCLCELLTALSHFNFTTSVLTAVIRL--GMGPDPLTRTMAGAAVRRLLERDQQGDVSLSATKLICKEMQHRRLQAPEDMLRALHALKLVVKEDEAVEVLRKARVHATKRKSQQLEEKEEDGE-SEVRTGLREAEARADPELRARCQSESLQEVTILYFRVLKQARKPT---LLPAALEGLSRVAHLINLDTVVDVLEVLKDMLDPTRNLPLGASLHAVLTALRTLQGPGRELRVDDKAFLTFLYQLLGRVGMGLAADSHQDEKRTDARSGVTIFPLLVTCLRKALLERREFSLARVAAFYKRLLGLALQLTSPQESQV-VLGIVKELPTRYPGLEQMLDGETDRVAMGVYRPDAVEPEMSNPLASGAWELSLLKVHHFHAGVRRAATEA 824
             D +PK  GR+  +N   ++   G  A ++ +  +         + R   E K   +A L E +LENP    +          +  G       R  + +  L D         D+ +   A+ SL+A+F+D+ P+YRIR  T+ E + K SKE K   +YER LL  YQ YL+ LE+      A   G+PQ     R    S+ A  LCELL +  HFNF +++LT V+R       DP++      AV  + E+D QG+VS+  ++L+ K ++  R      ++RA   L L V  DEA       + +A KRK        +D E +E+   L+E     D  + ARCQSE+LQ V + YFR+LK     T   LLP ALEGL++ +HLIN+DTVVD+L+VLK++L    +LPL ASL+ VLTA +TL+GPGRE+++D K ++T LY  L RVG                 S   I  LL+ CL  A ++RRE+S  RVAAF K+   +A+   +P  + V ++ + +++  RYP   Q+L+ E+D +  G Y PD  +PE SNP ++ AWEL++LK  HFH  VR+    A
Sbjct:   18 ADPKPKGKGRKTDQNTEDAKRTKGSDADDSTTTPIVKLEPPKSVLFRLSTEEKCDLVAELSELVLENPMKAFVLEKEIIDENDADDGATSTEVVRTISRVQKLLDLSRVHKNGNDEYIATLAIMSLLAIFKDILPSYRIRQQTDIERENKMSKETKALWDYERALLTHYQQYLQVLEK------AWERGQPQGGQPSRLAMTSMIA--LCELLKSAYHFNFRSNILTIVVRQMNNRNSDPVS-AACCKAVGFVFEKDLQGEVSMETSRLVAKLVKEYRGALRPGVVRAFIHLPLRVHTDEAQAAKLAEQANAKKRK--------KDKELAEIEADLKEGSGTVDKIILARCQSETLQNVILTYFRILKSTDTKTRHGLLPVALEGLAKFSHLINIDTVVDLLDVLKELLVEVDDLPLEASLNCVLTAFQTLEGPGREMQIDQKEYITPLYSQLARVG--------------SEGSSRKITELLLRCLTAAFIKRREYSTVRVAAFLKQTFTVAMH--APVYTSVPLIALARQILQRYPSAHQLLESESDVITSGQYTPDVDDPEHSNPFSTSAWELAVLKF-HFHPQVRQQVNAA 578          
BLAST of EWM30213.1 vs. NCBI_GenBank
Match: gi|298715259|emb|CBJ27908.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 311.997 bits (798), Expect = 7.859e-88
Identity = 258/731 (35.29%), Postives = 365/731 (49.93%), Query Frame = 0
Query:  105 TPAGSAGKSKRAHTAPEDNNGGVEVPIEQKSMRRKASTLGWNTARGIGHRVVKERLPTKTIDG--KLHFRLEEVEEIVEDTQ--KVNIVVSARKSKEKKDNR-----GG--EVEQGEEKKEEEGEEEEEEEEEEEEEEEEEDVEDDMNVAMHSETSDPEVLGDSRPKNGREAKNRSGSRVVSGQIAAEAESLSVEAFGGDVRAMRRARLELKKTEIATLCEAILENPEGGLLGRSAGGGWRGRGSRMGALLGALEDQDKQVQVWAMASLVAVFRDLAPAYRIRLPTEKELQVKASKEVKRTQEYERVLLASYQAYLKYLERTSHAGRASPSGKPQVSPAGREVRRSVAAKCLCELLTALSHFNFTTSVLTAVI-----RLGMGPDPLTRTMAGAAVRRLLERDQQGDVSLSATKLICKEMQHRRLQAPEDMLRALHALKLVVKEDEAVEVLRKARVHATKRKSQQLEEKEEDGESEVRTGLREAEARADPELRARCQSESLQEVTILYFRVLK-QARKPTLLPAALEGLSRVAHLINLDTV---VDVLEVLKDMLDPTRNLPLGASLHAVLTALRTLQGPGRELRVDDKAFLTFLYQLLGRVGMGLAADSHQDEKRTDARSGVTIFPLLVTCLRKALLERREFSLARVAAFYKRLLGLALQLTSPQE------SQVVLGIVKELPTRYPGLEQMLDGETDRVAMGVYRPDAVEPEMSNPLASGAWELSLLK 809
            TPA  A K+    + P    G  E  ++ K  RRKAST GW T    G     ERLP KT  G  K + R+++ E   +D Q  +    V+A  SK+  D       GG  E   G++     G+   + ++   +  +  ++ED       +E +D           G  A  RS +RV +G                D+  +R+ R E KK  +  LCE+IL  PE  L+            SR+  L   +ED D +V   A+ S  AVF+D+ P YRIR+PT  E+  K SKEV R +  E  LL +YQ YLK LE    A  +   G    S A      ++  +C+C LL+A  HFNF ++++  V+     +L    +   + + G     + E+D QG+VSL   K + K ++ R+    E  L+ L AL L V+EDE      KARV +  RK ++        E  V  GL EA+A  D ++RA+CQ+++L EV + YFRVLK +   P L PA +EGL++  HL+NLDTV   +D+L+ L    +    LPL A+LH VL A R LQGPGREL+ D+ AF++ LY+ L  +      D+         R  V    L+  CL  AL +RRE S ARVAA  KRLL ++LQLT          +  +L     L  RYP  +Q+L+ E DR   G +RPD   PE +N L+S AWELSLL+
Sbjct:  141 TPAAEAIKTPPTPSKP----GKKEAVVDAK--RRKASTTGW-TVEDSG----PERLPIKTRRGLLKPNERMKQSEASTQDKQSKEARKAVAAGNSKDGGDENNSAAAGGAEETSNGKQDITGSGDAMSDSDDSVYDSGDNSELED----YPMAEFND-----------GSSAGERSVARVTTGSKV-------------DLAVLRQRRFEQKKALMGELCESILGAPEESLVRPKTVVKGEDERSRIEQLFALVEDDDHRVCHLALLSQYAVFKDIIPGYRIRVPTAAEMATKVSKEVHRVRAQEAALLRAYQGYLKALEAAVQAAVSPKGGGASTSAARALASAAI--RCMCGLLSAHPHFNFRSNLVRTVVAGTNHKLAEVREACCKCLGG-----VFEQDTQGEVSLEIAKAVAKFIKERKYHVSEGTLKCLSALPLRVREDERARA--KARVKSKNRKRRR--------EGSVEAGLMEADASVDDDVRAKCQADALHEVMLTYFRVLKRRPPPPALFPAVMEGLAKFVHLVNLDTVQDLLDLLKDLLTEEEGEEELPLEAALHCVLAAFRALQGPGRELQTDEAAFVSALYRRLPDLLRPENGDA-------SGRKTVLCVALVYDCLDAALGKRRELSTARVAAMIKRLLSISLQLTQSANPAWGLGAGGLLRGAHRLLLRYPAAQQLLENEQDRPGSGPFRPDLTNPEHANALSSAAWELSLLR 808          
BLAST of EWM30213.1 vs. NCBI_GenBank
Match: gi|301103498|ref|XP_002900835.1| (nucleolar complex protein 3 [Phytophthora infestans T30-4] >gi|262101590|gb|EEY59642.1| nucleolar complex protein 3 [Phytophthora infestans T30-4])

HSP 1 Score: 296.975 bits (759), Expect = 2.374e-83
Identity = 213/642 (33.18%), Postives = 322/642 (50.16%), Query Frame = 0
Query:  293 DVRAMRRARLELKKTEIATLCEAILENPEGGLLGRSAGGGWRGRGSRMGALLGALEDQDKQVQVWAMASLVAVFRDLAPAYRIRL---PTEKELQVKAS------KEVKRTQEYERVLLASYQAYLKYLERTSHAGRASPSGKPQVSPAGREVRRSVAA----KCLCELLTALSHFNFTTSVLTAVIRLGMGPDPLTRTMAGAAVRRLLERDQQGDVSLSATKLICKEMQHRRLQAPEDMLRALHALKLVVKEDEAVEVLRKARVHATKRKSQQLEEKEEDGESEVRTGLREAEARADPELRARCQSESLQEVTILYFRVLKQARKPTLLPAALEGLSRVAHLINLDTVVDVLEVLKDMLDPTRNLPLGASLHAVLTALRTLQGP-GRELRVDDKAFLTFLYQLLGRVGMGLAADSHQDEKRTDARSGVTIFPLLVTCLRKALLERREFSLARVAAFYKRLLGLALQLTSPQESQVVLGIVKELPTRYPGLEQMLDGETDRVAMGVYRPDAVEPEMSNPLASGAWELSLLKVHHFHAGVRRAATEAITAATAAAASTQTATPWSSSSFRVRDYFNKAGKGLEKEVAMDDHWDFLKLGFGGMFTQLPRL-----NPLHAMI-----RRAAREKRGQRTRLYFI 910
            D++  R  RL  KK EIA LCE+ILENPE              + S++  L     D D  VQ  ++ S ++V+ D+ P YRIRL    T  E + K +      K+V++ Q+YE  LL +YQ +LKY       G      +   +   RE R  + A    +CL +LL     FNF  +++ A++ +     P  R  A A+   + + D+    S    + I   ++ ++ +    ++R L  + L V  ++     +KA+    KR+ QQ      DG+S +  GL+EAEA  D   R + Q++ L E+ ++YFR+LKQA     LPA LEGL++ + LINLD ++D+L+VLK +L     LPL A+L AVLT LR LQGP G+EL +DDK F+  LY+LL R   G AA            + +T FP L+ C+    L R+E  + RVA+F KRLL +A  L  P ++  +L +++ L  RY  L+Q+L+ + DRVA G YR D  +P+ +NP +S  WEL+LL  HH H  +          A+ A  + Q A    +   R                A+ D +D      G  F   P++     NPLH  I     +   ++ R +R R +F+
Sbjct:  183 DLKRQRELRLITKKVEIAQLCESILENPEESF---KKNKEHPQQLSKIQQLQSLCRDPDATVQRLSLMSQLSVYLDILPDYRIRLQNNDTNTEDKGKQNHGRPMKKKVQQMQDYEATLLNNYQKFLKYCAELVTTGLKGKRYEQLATMTARERRDVLLAETGVRCLAQLLEKKYAFNFHLNLVIALVPMADSQFPSIREQACASFESVFKSDKSCACSYEIVQQISSYVKQKQHRVQPFIIRTLLVMPLEVTMEQGEAARKKAKSDRKKRRRQQ-----ADGDS-IAAGLKEAEAVVDRAEREKTQADILHELVLIYFRILKQATYSQALPAVLEGLAKYSFLINLDIMIDLLKVLKVVLREEDVLPLPAALQAVLTGLRALQGPGGQELMIDDKEFVDILYRLLHRFAEGEAA------------ADLTCFPTLLQCVEAVFLRRKEIVVERVASFVKRLLLVAQHL-PPHQALAILSLLRALFHRYSKLQQLLESDVDRVASGEYRADIDDPDFANPFSSACWELALL-THHVHPKL----------ASYALGTAQMAPTLPNEHAR----------------ALMDAFDPYA---GATFALKPKVPVPPSNPLHKKIASENNKNDRKKSRQRRARQFFV 772          
BLAST of EWM30213.1 vs. NCBI_GenBank
Match: gi|698793138|ref|XP_009829601.1| (hypothetical protein H257_06171 [Aphanomyces astaci] >gi|574115168|gb|ETV80654.1| hypothetical protein H257_06171 [Aphanomyces astaci])

HSP 1 Score: 296.204 bits (757), Expect = 6.183e-83
Identity = 205/612 (33.50%), Postives = 313/612 (51.14%), Query Frame = 0
Query:  293 DVRAMRRARLELKKTEIATLCEAILENPEGGLLGRSAGGGWRGRGSRMGALLGALEDQDKQVQVWAMASLVAVFRDLAPAYRIRLPTEKELQVKASKEVKRTQEYERVLLASYQAYLKYLERTSHAGRAS----PSGKPQVSPAGREVRRSVAAKCLCELLTALSHFNFTTSVLTAVIRLGMGPDPLTRTMAGAAVRRLLERDQQGDVSLSATKLICKEMQHRRLQAPEDMLRALHALKLVVKEDEAVEVLRKARVHATKRKSQQLEEKEEDGESEVRTGLREAEARADPELRARCQSESLQEVTILYFRVLKQARKPTLLPAALEGLSRVAHLINLDTVVDVLEVLKDMLDPTRNLPLGASLHAVLTALRTLQGPGRELRVDDKAFLTFLYQLLGRVGMGLAADSHQDEKRTDARSGVTIFPLLVTCLRKALLERREFSLARVAAFYKRLLGLALQLTSPQESQVVLGIVKELPTRYPGLEQMLDGETDRVAMGVYRPDAVEPEMSNPLASGAWELSLLKVHHFHAGVRRAATEAITAATAAAASTQTATPWSSSSFRVRDYFNKAGKGLEKEVAMDDHWDFLKLGFGGMFTQLPRLNPLHAMIRRAAREK 900
            ++RAM+  RL  KK E+A LCE+ILE+PE  +           + S+   L    ED D  +   AM S ++V  D+ P YRIRL ++ +      K+VK  +++E  LL  YQ YLKYL  T+ A  ++     S + Q       V  + A KCL ELL     FNF  +++ A++     P P  +  A  A   + + D+ G   L   K +   ++ R  +  E M++ L  + L     EA E+ R  RV  + RK ++ ++K+ DG   + TGL+EAEA  D   R + Q + L E+ ++YFRVLK +     +PA LEGL++ A+LINL+ ++D+++VLK +L     LPL A+L A+LT ++TLQGPG+EL+VD+K F+  LY+LL R   G                 V  F   + C+    ++R+E  + RVAAF KRLL +++ L  P +   V  +++ L  RY  L Q+L+ + DRVA G+YR D  +P+  NP AS  WELS L   H+H  V   +T          A+ + + P                   E   AM + +D +  G       +P+ NPLHA + +  + K
Sbjct:  227 ELRAMQARRLHSKKEELALLCESILESPEEAV---KKTKDHPDQLSKFQQLHAMCEDTDVTLVKLAMLSELSVLLDVLPDYRIRLGSDGDSSGPQKKKVKEMKDFETNLLNQYQKYLKYLSATATAKLSTLNPNQSSRTQTQHLDFGVAET-AVKCLAELLKVKYAFNFHLNLINAMVPFADSPFPTIQRPACDAFEVVFKVDKSGLAPLEIVKDMANYVKKRHHRVSERMIKTLLVMPLDTTM-EAGEIAR--RVAKSSRKKRRRQQKDGDG---IATGLKEAEAVVDKSERDKTQGDILHELVLIYFRVLKNSTYSPAMPAVLEGLTKFAYLINLEIMIDLMKVLKALLK-EDILPLAAALQAILTGIKTLQGPGQELKVDEKDFVDHLYRLLLRFAQG---------------ENVACFNTALHCVEAVFIKRKEIVVDRVAAFIKRLLVVSMYLY-PHQMLAVSALIRSLFHRYSKLHQLLENDQDRVASGIYRADVDDPDFCNPFASACWELSFLG-KHYHPVVASFST--------GTANLEPSLPN------------------EHPKAMLERYDTVTSGEFVPRVSIPKANPLHAKMLKQKKAK 784          
BLAST of EWM30213.1 vs. NCBI_GenBank
Match: gi|673038648|ref|XP_008873285.1| (hypothetical protein H310_09097 [Aphanomyces invadans] >gi|574470715|gb|ETV97724.1| hypothetical protein H310_09097 [Aphanomyces invadans])

HSP 1 Score: 290.041 bits (741), Expect = 1.091e-80
Identity = 185/533 (34.71%), Postives = 287/533 (53.85%), Query Frame = 0
Query:  293 DVRAMRRARLELKKTEIATLCEAILENPEGGLLGRSAGGGWRGRGSRMGALLGALEDQDKQVQVWAMASLVAVFRDLAPAYRIRLPTEKELQVKASKEVKRTQEYERVLLASYQAYLKYLERTSHAGRASPSGKPQVSPAGREVRRSVA---AKCLCELLTALSHFNFTTSVLTAVIRLGMGPDPLTRTMAGAAVRRLLERDQQGDVSLSATKLICKEMQHRRLQAPEDMLRALHALKLVVKEDEAVEVLRKARVHATKRKSQQLEEKEEDGESEVRTGLREAEARADPELRARCQSESLQEVTILYFRVLKQARKPTLLPAALEGLSRVAHLINLDTVVDVLEVLKDMLDPTRNLPLGASLHAVLTALRTLQGPGRELRVDDKAFLTFLYQLLGRVGMGLAADSHQDEKRTDARSGVTIFPLLVTCLRKALLERREFSLARVAAFYKRLLGLALQLTSPQESQVVLGIVKELPTRYPGLEQMLDGETDRVAMGVYRPDAVEPEMSNPLASGAWELSLLKVHHFHAGVRRAAT 822
            +++AM+  RL  KK E+A LCE+ILE+PE  +           +  ++ A+    ED D  +   AM S ++V  D+ P YRIR+ +E        K VK  +E+E  +L  YQ +LK+L  T+    ++         A +++   VA    KCL ELL     FNF  +++ A++ L   P    +     A   + + D+ G   L   K +   ++ R  +  E M++ L A+ L V   EA E+ R  RV  + RK ++ ++KE D    + TGL+EAEA  D   R + Q++ L E+ ++YFR+LK +     +PA LEGL++ A+LINL+ ++D+++VLK +L     LPL A+L A+LT ++TLQGPG+EL+VD+K F+  LY+LL R   G                 V  F   + C+    ++R+E  + RVAAF KRLL +++ L  P +   V  +++ L  RY  L Q+L+ + DRVA G+YR D  +P+  NP AS  WELS L   H+H  V   +T
Sbjct:  227 ELKAMQARRLHAKKEELALLCESILESPEDAVKKSKEHPEQLSKFQQLHAMC---EDTDVTLVKLAMLSELSVLLDVLPDYRIRIGSEAASSGPQKKRVKEMKEFESGMLNQYQTFLKFLSATATTNLSTLHPNQMTRTATQQIEFGVAETAVKCLAELLKVKYAFNFNLNLIHAMVPLADSPFVSIQRPVCDAFEVVFKTDKSGLAPLEIVKDMANYVKKRHHRVSERMIKTLLAMPLDVTM-EAGEIAR--RVAKSSRKKRRRQQKEGDT---IATGLKEAEAVVDKSERDKTQADILHELVLIYFRILKNSTYSPAMPAVLEGLTKFAYLINLEIMIDLMKVLKALLKEDI-LPLSAALQAILTGIKTLQGPGQELKVDEKDFVDHLYRLLLRFAQG---------------ENVACFNTALLCVEAVFIKRKEIVVDRVAAFIKRLLVVSMFLY-PHQMLAVSALIRSLFHRYSKLHQLLETDQDRVASGMYRADVDDPDFCNPFASACWELSFLG-KHYHPVVASFST 732          
BLAST of EWM30213.1 vs. NCBI_GenBank
Match: gi|570317057|gb|ETO65005.1| (hypothetical protein F444_17597 [Phytophthora parasitica P1976])

HSP 1 Score: 290.041 bits (741), Expect = 1.465e-80
Identity = 212/663 (31.98%), Postives = 327/663 (49.32%), Query Frame = 0
Query:  273 VVSGQIAAEAESLSVEAFGGDVRAMRRARLELKKTEIATLCEAILENPEGGLLGRSAGGGWRGRGSRMGALLGALEDQDKQVQVWAMASLVAVFRDLAPAYRIRLPTEKELQVK----------ASKEVKRTQEYERVLLASYQAYLKYLERTSHAGRASPSGKPQVSPAGREVRRSVAA----KCLCELLTALSHFNFTTSVLTAVIRLGMGPDPLTRTMAGAAVRRLLERDQQGDVSLSATKLICKEMQHRRLQAPEDMLRALHALKLVVKEDEAVEVLRKARVHATKRKSQQLEEKEEDGESEVRTGLREAEARADPELRARCQSESLQEVTILYFRVLKQARKPTLLPAALEGLSRVAHLINLDTVVDVLEVLKDMLDPTRNLPLGASLHAVLTALRTLQGP-GRELRVDDKAFLTFLYQLLGRVGMGLAADSHQDEKRTDARSGVTIFPLLVTCLRKALLERREFSLARVAAFYKRLLGLALQLTSPQESQVVLGIVKELPTRYPGLEQMLDGETDRVAMGVYRPDAVEPEMSNPLASGAWELSLLKVHHFHAGVRRAATEAITAATAAAASTQTATPWSSSSFRVRDYFNKAGKGLEKEVAMDDHWDFLKLGFGGMFTQLPRL-----NPLHAMI-----RRAAREKRGQRTRLYFI 910
            +     +A  E+   E    D++  R  RL  KK EIA LCE+ILE+PE              + S++  L     D D  VQ  ++ S ++VF D+ P YRIRL  + +L  +            K+V++ Q+YE  LL +YQ +LKY       G      +  V+   RE R  + A    +CL +LL     FNF  +++ A++ +     P  R  A A+   + + D+    S    + I   ++ ++ +    ++R L  + L V  ++     +KA+    KR+ QQ E     G++ +  GL+EAEA  D   R + Q++ L E+ ++YFR+LKQA     LPA LEGL++ + LINLD ++D+L+VLK +L     LPL A+L AVLT +R LQGP G+EL VDDK F+  LY+LL R   G            +A S  + F  L+ C+    L R+E  + RVA+F KRLL +A  L  P ++  +L +++ L  RY  L+Q+L+ + DRVA G YR D  +P+ +NP +S  WEL+LL  HH H  +          ++ A  + Q A    +   R                A+ D +D      G  FT  P++     NPLH  I     +   ++ R +R R +F+
Sbjct:  195 ITDADASAPTETPKPELSPVDLKRQRELRLVTKKVEIAQLCESILEDPEESF---KKNKEHPQQLSKIQQLQELCRDPDAIVQRLSLMSQLSVFLDILPDYRIRL-QKNDLSAEEKGKQNHGRPMKKKVQQMQDYEAALLNNYQKFLKYCAELVTTGLKGKRPEQMVTMTARERRDVLLAETGVRCLAQLLEKKYAFNFHLNLVIALVPMADSQFPSVREQACASFESVFKSDKTCVCSYEIVQQISSYVKQKQHRVQPFIIRTLLVMPLEVTMEQGEAARKKAKSDRKKRRRQQAE-----GDT-IAAGLKEAEAVVDRAEREKTQADILHELVLIYFRILKQATYSQALPAVLEGLAKFSFLINLDIMIDLLKVLKVVLREEDVLPLPAALQAVLTGMRALQGPGGQELMVDDKEFVDILYRLLHRFAEG------------EAGSDSSCFTTLLQCVEAVFLRRKEIVVERVASFVKRLLLVAQHL-PPHQALAILSLLRALFHRYSKLQQLLESDVDRVASGEYRADIDDPDFANPFSSACWELALL-THHVHPKL----------SSYALGTAQLAPTLPNEHAR----------------ALMDAYDPYA---GATFTFKPKVPVPPSNPLHKKIASENNKNDRKKSRQRRARQFFV 804          
The following BLAST results are available for this feature:
BLAST of EWM30213.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585112872|gb|EWM30213.1|0.000e+0100.00nucleolar complex protein 3 [Nannochloropsis gadit... [more]
gi|1210517814|dbj|GAX23215.1|5.103e-9639.96nucleolar complex protein 3 [Fistulifera solaris][more]
gi|1210530868|dbj|GAX10408.1|5.232e-9437.90nucleolar complex protein 3 [Fistulifera solaris][more]
gi|219111751|ref|XP_002177627.1|2.265e-9238.05predicted protein [Phaeodactylum tricornutum CCAP ... [more]
gi|1072224677|gb|OEU09426.1|6.342e-9235.97NOC3p-domain-containing protein [Fragilariopsis cy... [more]
gi|298715259|emb|CBJ27908.1|7.859e-8835.29conserved unknown protein [Ectocarpus siliculosus][more]
gi|301103498|ref|XP_002900835.1|2.374e-8333.18nucleolar complex protein 3 [Phytophthora infestan... [more]
gi|698793138|ref|XP_009829601.1|6.183e-8333.50hypothetical protein H257_06171 [Aphanomyces astac... [more]
gi|673038648|ref|XP_008873285.1|1.091e-8034.71hypothetical protein H310_09097 [Aphanomyces invad... [more]
gi|570317057|gb|ETO65005.1|1.465e-8031.98hypothetical protein F444_17597 [Phytophthora para... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna446rna446Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications