EWM30326.1, cds406 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM30326.1 vs. NCBI_GenBank
Match: gi|585112985|gb|EWM30326.1| (ubiquitin-conjugating enzyme catalytic domain protein [Nannochloropsis gaditana]) HSP 1 Score: 1627.84 bits (4214), Expect = 0.000e+0 Identity = 809/809 (100.00%), Postives = 809/809 (100.00%), Query Frame = 0 Query: 1 MIVVDLQSKEIVKFCRLQVMLRGISLPGLSDRGPLRWTAASLGGLRNIRQGSRGGDKDVQEFLEEAVTPRGAQGPRSGAGRGSGSYERFIKTYKETVLTEEDKRFKTWSNWKDQLEDFENDGQEDLSGGEEGYLGSMVDMESSGRGAKKGRGRGRSVRGRSVRRSRGGRDEEGGEDVGSYFDWTEGSLFIPDLVVREGDEGGTVSDRIRVEDDLQLRLNKLLWRRLKLRARDLDQHVPRAYRRGRAVQRAMAEARAREARAGTGIPGAKGAGLEVQSGTGEDGLGTVRETRETSGGPGSRGQVGEGLQEGSPEPVAGGVAPALDPDIQVVKRLNQARTLEAIEDEIGRLMVEGKVDVEMEEEQIRARRLQARARRMSSGEYDHGEDIDGGGEEEEGDGEERQGSKMDDWTRIHVQDLEEAVGEEVPTLDADEEGFEAFREYAEQLIEAGGVIEYRSTRAGKYDREMALPAPLATGRALEQALRRDRTAVEKVSASKHRFGGKEKGTAPMSASDFEASAACAWLALNKNVSMGDTTRMELSGALATTLQRLQEKPGRLERVRAHDKKQASRGDRRNRFHRMLRAKKKKEEEAAAAAAAAAKIDVDGGSSSSVAVEAGEREKAHDGGAPATENGTVSIMGIGGKSVKAAQSKGRRRQPAELRIQKDLAEVELGTAATLIFPNPNDLTDFIVEVSPESGFWTGAKFTFTFRFPAEYPHTPPKVTCQTRILHPNIDWEGNVCLNILREEWKPILDVNAIIYGLLHLFAEPNPDDPLNKEAAELFRADARQFERVVKQTLRGLSYQGHTFERLL 809 MIVVDLQSKEIVKFCRLQVMLRGISLPGLSDRGPLRWTAASLGGLRNIRQGSRGGDKDVQEFLEEAVTPRGAQGPRSGAGRGSGSYERFIKTYKETVLTEEDKRFKTWSNWKDQLEDFENDGQEDLSGGEEGYLGSMVDMESSGRGAKKGRGRGRSVRGRSVRRSRGGRDEEGGEDVGSYFDWTEGSLFIPDLVVREGDEGGTVSDRIRVEDDLQLRLNKLLWRRLKLRARDLDQHVPRAYRRGRAVQRAMAEARAREARAGTGIPGAKGAGLEVQSGTGEDGLGTVRETRETSGGPGSRGQVGEGLQEGSPEPVAGGVAPALDPDIQVVKRLNQARTLEAIEDEIGRLMVEGKVDVEMEEEQIRARRLQARARRMSSGEYDHGEDIDGGGEEEEGDGEERQGSKMDDWTRIHVQDLEEAVGEEVPTLDADEEGFEAFREYAEQLIEAGGVIEYRSTRAGKYDREMALPAPLATGRALEQALRRDRTAVEKVSASKHRFGGKEKGTAPMSASDFEASAACAWLALNKNVSMGDTTRMELSGALATTLQRLQEKPGRLERVRAHDKKQASRGDRRNRFHRMLRAKKKKEEEAAAAAAAAAKIDVDGGSSSSVAVEAGEREKAHDGGAPATENGTVSIMGIGGKSVKAAQSKGRRRQPAELRIQKDLAEVELGTAATLIFPNPNDLTDFIVEVSPESGFWTGAKFTFTFRFPAEYPHTPPKVTCQTRILHPNIDWEGNVCLNILREEWKPILDVNAIIYGLLHLFAEPNPDDPLNKEAAELFRADARQFERVVKQTLRGLSYQGHTFERLL Sbjct: 1 MIVVDLQSKEIVKFCRLQVMLRGISLPGLSDRGPLRWTAASLGGLRNIRQGSRGGDKDVQEFLEEAVTPRGAQGPRSGAGRGSGSYERFIKTYKETVLTEEDKRFKTWSNWKDQLEDFENDGQEDLSGGEEGYLGSMVDMESSGRGAKKGRGRGRSVRGRSVRRSRGGRDEEGGEDVGSYFDWTEGSLFIPDLVVREGDEGGTVSDRIRVEDDLQLRLNKLLWRRLKLRARDLDQHVPRAYRRGRAVQRAMAEARAREARAGTGIPGAKGAGLEVQSGTGEDGLGTVRETRETSGGPGSRGQVGEGLQEGSPEPVAGGVAPALDPDIQVVKRLNQARTLEAIEDEIGRLMVEGKVDVEMEEEQIRARRLQARARRMSSGEYDHGEDIDGGGEEEEGDGEERQGSKMDDWTRIHVQDLEEAVGEEVPTLDADEEGFEAFREYAEQLIEAGGVIEYRSTRAGKYDREMALPAPLATGRALEQALRRDRTAVEKVSASKHRFGGKEKGTAPMSASDFEASAACAWLALNKNVSMGDTTRMELSGALATTLQRLQEKPGRLERVRAHDKKQASRGDRRNRFHRMLRAKKKKEEEAAAAAAAAAKIDVDGGSSSSVAVEAGEREKAHDGGAPATENGTVSIMGIGGKSVKAAQSKGRRRQPAELRIQKDLAEVELGTAATLIFPNPNDLTDFIVEVSPESGFWTGAKFTFTFRFPAEYPHTPPKVTCQTRILHPNIDWEGNVCLNILREEWKPILDVNAIIYGLLHLFAEPNPDDPLNKEAAELFRADARQFERVVKQTLRGLSYQGHTFERLL 809
BLAST of EWM30326.1 vs. NCBI_GenBank
Match: gi|219126435|ref|XP_002183463.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217405219|gb|EEC45163.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 249.98 bits (637), Expect = 4.092e-74 Identity = 111/187 (59.36%), Postives = 141/187 (75.40%), Query Frame = 0 Query: 625 GAPATENGTVSIMGIGGK-SVKAAQSKG-RRRQPAELRIQKDLAEVELGTAATLIFPNPNDLTDFIVEVSPESGFWTGAKFTFTFRFPAEYPHTPPKVTCQTRILHPNIDWEGNVCLNILREEWKPILDVNAIIYGLLHLFAEPNPDDPLNKEAAELFRADARQFERVVKQTLRGLSYQGHTFERLL 809 G + +N VS++G+GGK K + K ++R P E+RIQKD+AE++ G AT+ FPN NDLT F V +SP+SG+W GA + FTF P YPH+PPKV CQT+I HPNID +G VCLNILRE+WKP+LD+N ++YGL++LF EPNPDDPLN EAAELFR D RQFER+V +TLRG G FERL+ Sbjct: 34 GTHSPDNNKVSLLGVGGKKQTKNGECKATKKRSPGEIRIQKDIAELDGGNVATIDFPNANDLTSFHVAISPDSGYWKGATYHFTFTIPPHYPHSPPKVECQTKIYHPNIDLQGKVCLNILREDWKPVLDINGVVYGLIYLFYEPNPDDPLNHEAAELFRKDVRQFERLVSRTLRGGILDGVQFERLV 220
BLAST of EWM30326.1 vs. NCBI_GenBank
Match: gi|1210523446|dbj|GAX17770.1| (ubiquitin-conjugating enzyme E2 M [Fistulifera solaris]) HSP 1 Score: 243.817 bits (621), Expect = 7.611e-72 Identity = 111/187 (59.36%), Postives = 141/187 (75.40%), Query Frame = 0 Query: 626 APATENGTVSIMGIGGKS-VKAAQS--KGRRRQPAELRIQKDLAEVELGTAATLIFPNPNDLTDFIVEVSPESGFWTGAKFTFTFRFPAEYPHTPPKVTCQTRILHPNIDWEGNVCLNILREEWKPILDVNAIIYGLLHLFAEPNPDDPLNKEAAELFRADARQFERVVKQTLRGLSYQGHTFERLL 809 APA + VS++GIGGK VK ++ G++R P E+RIQ D+AE++ G AT+ FPNPNDLT F V V+P++G W GA + FTF P YPH+PP+V C T+I HPNID +G VCLNILRE+WKP+LD+N++IYGL++LF EPNPDDPLN EAAELFR D QFER+V +TLRG G FERL+ Sbjct: 31 APADQPQKVSLLGIGGKKMVKNGETGKTGKKRTPGEIRIQTDIAELDGGDVATIKFPNPNDLTLFDVSVTPDTGLWKGATYHFTFTIPPHYPHSPPRVECNTKIYHPNIDLQGKVCLNILREDWKPVLDINSVIYGLIYLFYEPNPDDPLNHEAAELFRKDKTQFERLVMRTLRGGILDGVHFERLV 217
BLAST of EWM30326.1 vs. NCBI_GenBank
Match: gi|612134636|dbj|BAO65811.1| (ubiquitin conjugating enzyme 12 [Ciliophrys infusionum]) HSP 1 Score: 243.817 bits (621), Expect = 8.558e-72 Identity = 114/191 (59.69%), Postives = 147/191 (76.96%), Query Frame = 0 Query: 620 KAHDGGAPATENGTVSIM-GIGGKSVKAAQSKGRRRQPAELRIQKDLAEVELGTAATLIFPNPNDLTDFIVEVSPESGFWTGAKFTFTFRFPAEYPHTPPKVTCQTRILHPNIDWEGNVCLNILREEWKPILDVNAIIYGLLHLFAEPNPDDPLNKEAAELFRADARQFERVVKQTLRGLSYQGHTFERLL 809 KA GA A E+G +S++ GIGG++V + K ++R P E+RIQKD+AE++ GT A FP+ +DLT F V ++P+SGFW GA + F+F PA+YPH PKV C TRI HPNI+ EGNVCLNILRE+WKP+LD+NA+IYGL++LF EPNPDDPLN EAA+LFR + FER V++TLRG S+QG FERLL Sbjct: 24 KAATNGAAAEEHGPISVVDGIGGEAVNTGKKK-KKRTPGEIRIQKDIAELDGGTVARHEFPSNSDLTKFFVIITPDSGFWRGATYRFSFTIPAQYPHEAPKVLCLTRIYHPNINLEGNVCLNILREDWKPVLDINAVIYGLIYLFYEPNPDDPLNHEAADLFRTNIASFERTVQRTLRGGSHQGVMFERLL 213
BLAST of EWM30326.1 vs. NCBI_GenBank
Match: gi|299117068|emb|CBN73839.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 243.432 bits (620), Expect = 9.022e-72 Identity = 111/212 (52.36%), Postives = 155/212 (73.11%), Query Frame = 0 Query: 600 KIDVDGGSSSSVAVEAGEREKAHDGGAPATENGTVSIMGIGGKSVK--AAQSKGRRRQPAELRIQKDLAEVELGTAATLIFPNPNDLTDFIVEVSPESGFWTGAKFTFTFRFPAEYPHTPPKVTCQTRILHPNIDWEGNVCLNILREEWKPILDVNAIIYGLLHLFAEPNPDDPLNKEAAELFRADARQFERVVKQTLRGLSYQGHTFERLL 809 ++D + S+++ +AGE + A G + ++GIGG+ K +A++ G ++ P E+RIQKD+A+++ G+ A + FPNPN+LT F V+V P+SGFW GA + FTF PA YPH PPKV C+T+I HPNI+ +GNVCLNILRE+WKP+LD+NA+IYGL++LF EPNP+DPLN EAAEL+R + QFER VK+TL G G TF+RL+ Sbjct: 2 EVDEETPSNAAAQPKAGEEKAA----------GKLHVLGIGGRRAKRGSAKATGTKKTPGEIRIQKDIADLDGGSVAEITFPNPNNLTSFKVKVQPDSGFWKGASYHFTFSIPALYPHDPPKVLCETKIYHPNINLQGNVCLNILREDWKPVLDINAVIYGLIYLFYEPNPEDPLNHEAAELYRDNISQFERTVKRTLAGCVMHGETFQRLI 203
BLAST of EWM30326.1 vs. NCBI_GenBank
Match: gi|1210518264|dbj|GAX22876.1| (ubiquitin-conjugating enzyme E2 M [Fistulifera solaris]) HSP 1 Score: 243.432 bits (620), Expect = 1.392e-71 Identity = 113/196 (57.65%), Postives = 144/196 (73.47%), Query Frame = 0 Query: 617 EREKAHDGGAPATENGTVSIMGIGGKS-VKAAQS--KGRRRQPAELRIQKDLAEVELGTAATLIFPNPNDLTDFIVEVSPESGFWTGAKFTFTFRFPAEYPHTPPKVTCQTRILHPNIDWEGNVCLNILREEWKPILDVNAIIYGLLHLFAEPNPDDPLNKEAAELFRADARQFERVVKQTLRGLSYQGHTFERLL 809 + E+ APA + VS++GIGGK VK +S G++R P E+RIQ D+AE++ G AT+ FPNPNDLT F V V+P++G W GA + FTF P YPH+PP+V C T+I HPNID +G VCLNILRE+WKP+LD+N++IYGL++LF EPNPDDPLN EAAELFR D QFER+V +TLRG G FERL+ Sbjct: 22 QAEQPTTAEAPADQPRKVSLLGIGGKKMVKNGESGMTGKKRTPGEIRIQTDIAELDGGDVATIKFPNPNDLTLFDVSVTPDTGLWKGATYHFTFTIPPHYPHSPPRVECNTKIYHPNIDLQGKVCLNILREDWKPVLDINSVIYGLIYLFYEPNPDDPLNHEAAELFRKDKTQFERLVMRTLRGGILDGVHFERLV 217
BLAST of EWM30326.1 vs. NCBI_GenBank
Match: gi|813157955|ref|XP_012202326.1| (hypothetical protein SPRG_07658 [Saprolegnia parasitica CBS 223.65] >gi|641532938|gb|KDO26945.1| hypothetical protein SPRG_07658 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 243.047 bits (619), Expect = 1.590e-71 Identity = 107/176 (60.80%), Postives = 143/176 (81.25%), Query Frame = 0 Query: 634 VSIMGIGGKSVKAAQSKGRRRQPAELRIQKDLAEVELGTAATLIFPNPNDLTDFIVEVSPESGFWTGAKFTFTFRFPAEYPHTPPKVTCQTRILHPNIDWEGNVCLNILREEWKPILDVNAIIYGLLHLFAEPNPDDPLNKEAAELFRADARQFERVVKQTLRGLSYQGHTFERLL 809 VSI GIG + + A+ K ++R P E+RIQKD+AE++ G+AA + FP+PNDLT F V+V+ ++G WTGA + FTF+ PA YPH PPKV C+T+I HPNID EG+VCLNILR++WKP+LD+NA+IYGL++LF EPNPDDPLNKEAAE+FR D R+F+ +V ++LRG + QG FERL+ Sbjct: 42 VSIFGIG-RGKRTAKPKEKKRTPGEIRIQKDIAELDGGSAAVVSFPDPNDLTTFDVKVAVDTGLWTGATYHFTFKIPALYPHEPPKVRCETKIYHPNIDLEGHVCLNILRDDWKPVLDINAVIYGLIYLFYEPNPDDPLNKEAAEIFRNDPRRFQDLVSRSLRGQTVQGQQFERLV 216
BLAST of EWM30326.1 vs. NCBI_GenBank
Match: gi|669165234|ref|XP_008618179.1| (ubiquitin-conjugating enzyme E2 M [Saprolegnia diclina VS20] >gi|530730289|gb|EQC28531.1| ubiquitin-conjugating enzyme E2 M [Saprolegnia diclina VS20]) HSP 1 Score: 243.047 bits (619), Expect = 1.783e-71 Identity = 107/176 (60.80%), Postives = 143/176 (81.25%), Query Frame = 0 Query: 634 VSIMGIGGKSVKAAQSKGRRRQPAELRIQKDLAEVELGTAATLIFPNPNDLTDFIVEVSPESGFWTGAKFTFTFRFPAEYPHTPPKVTCQTRILHPNIDWEGNVCLNILREEWKPILDVNAIIYGLLHLFAEPNPDDPLNKEAAELFRADARQFERVVKQTLRGLSYQGHTFERLL 809 VSI GIG + + A+ K ++R P E+RIQKD+AE++ G+AA + FP+PNDLT F V+V+ ++G WTGA + FTF+ PA YPH PPKV C+T+I HPNID EG+VCLNILR++WKP+LD+NA+IYGL++LF EPNPDDPLNKEAAE+FR D R+F+ +V ++LRG + QG FERL+ Sbjct: 42 VSIFGIG-RGKRTAKPKEKKRTPGEIRIQKDIAELDGGSAAVVSFPDPNDLTTFDVKVAVDTGLWTGATYHFTFKIPALYPHEPPKVRCETKIYHPNIDLEGHVCLNILRDDWKPVLDINAVIYGLIYLFYEPNPDDPLNKEAAEIFRNDPRRFQDLVTRSLRGQTVQGQQFERLV 216
BLAST of EWM30326.1 vs. NCBI_GenBank
Match: gi|698795702|ref|XP_009830880.1| (hypothetical protein H257_07143 [Aphanomyces astaci] >gi|574114456|gb|ETV79944.1| hypothetical protein H257_07143 [Aphanomyces astaci]) HSP 1 Score: 242.662 bits (618), Expect = 3.587e-71 Identity = 122/230 (53.04%), Postives = 164/230 (71.30%), Query Frame = 0 Query: 580 MLRAKKKKEEEAAAAAAAAAKIDVDGGSSSSVAVEAGEREKAHDGGAPATENGTVSIMGIGGKSVKAAQSKGRRRQPAELRIQKDLAEVELGTAATLIFPNPNDLTDFIVEVSPESGFWTGAKFTFTFRFPAEYPHTPPKVTCQTRILHPNIDWEGNVCLNILREEWKPILDVNAIIYGLLHLFAEPNPDDPLNKEAAELFRADARQFERVVKQTLRGLSYQGHTFERLL 809 ML+ KK++ E AAAAAAAA G+ V A + + GA G V IMG+G + K SK ++R P E+RIQKD+AE++ G+AA + FP+ NDLT+F V ++ ++G WTGA + FTF+ P+ YPH PPKV C T+I HPNID +GNVCLNILRE+WKP+LD+NA+IYGL++LF EPNPDDPLN+EAAE+FR D R+F+ +V ++LRG QG F+RL+ Sbjct: 3 MLKRKKEQAEREAAAAAAAAAAAAPSGTDDGVPAPADDSTASTADGAAPPAPGGVKIMGLGRGTRK---SKEKKRTPGEIRIQKDIAELDGGSAAVVSFPDSNDLTNFQVRITVDTGLWTGAAYNFTFKIPSFYPHEPPKVRCVTKIYHPNIDLDGNVCLNILREDWKPVLDINAVIYGLIYLFYEPNPDDPLNREAAEMFRNDPRRFQDLVSRSLRGQFVQGIQFDRLV 229
BLAST of EWM30326.1 vs. NCBI_GenBank
Match: gi|397616171|gb|EJK63862.1| (hypothetical protein THAOC_15459 [Thalassiosira oceanica]) HSP 1 Score: 241.891 bits (616), Expect = 5.170e-71 Identity = 110/188 (58.51%), Postives = 140/188 (74.47%), Query Frame = 0 Query: 626 APATENGTVSIMGIGGKSVKAAQSKG----RRRQPAELRIQKDLAEVELGTAATLIFPNPNDLTDFIVEVSPESGFWTGAKFTFTFRFPAEYPHTPPKVTCQTRILHPNIDWEGNVCLNILREEWKPILDVNAIIYGLLHLFAEPNPDDPLNKEAAELFRADARQFERVVKQTLRGLSYQGHTFERLL 809 APA N VS++GIGGK KA G ++R P E+RIQKD+A+++ G A + FPNPN+LT F V ++P+SG+W A + F F P YPHTPPKV C+T+I HPNI+ EG VCLNILRE+WKP+LD+NA+IYGL+ LF EPNPDDPLN EAA+LFR D RQFER+V++TLRG G F+RL+ Sbjct: 32 APADSN-KVSLLGIGGKKKKANDGNGASGKKKRTPGEIRIQKDIADLDGGKVANIEFPNPNNLTAFEVSITPDSGYWKNATYNFKFDIPDHYPHTPPKVHCETKIYHPNINLEGKVCLNILREDWKPVLDINAVIYGLIFLFYEPNPDDPLNHEAADLFRRDIRQFERLVQRTLRGGVMDGVHFDRLI 218 The following BLAST results are available for this feature:
BLAST of EWM30326.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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