EWM30248.1, cds402 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM30248.1 vs. NCBI_GenBank
Match: gi|585112907|gb|EWM30248.1| (gtp-binding protein era [Nannochloropsis gaditana]) HSP 1 Score: 759.985 bits (1961), Expect = 0.000e+0 Identity = 369/369 (100.00%), Postives = 369/369 (100.00%), Query Frame = 0 Query: 1 MEDYDDDEELSDQHRAMLAAPAKKLDELLKDAGIEFGDPTLMEDDQGSEGFRAGFVSIIGSPNVGKSTLMNSLVGERVSIVTSKQQTTRHQIMGVVTGEDFQIVYYDTPGVLRPNYKLQEGMMAFVKESLGDADVVLLMTDVFEDPRDFPDQQIFEHMQQSRRPLLLAVNKIDLLPNATHPQGNLGKDALERVGTLQDVVARWQAALPNASIIPISAREYFNLDELLASLKEELPPSPPLYPNDTLTDKPQRFFASELIREKLFTSYSKEIPYSCEVSVTGFKDQGRLIKINSTIFTTRDSHVPILIGTKGSKLKEVGTQARLDLENFFGKKIYLEMRVKVRKDWRSNLKDLSAFGYMQQGGETENTKI 369 MEDYDDDEELSDQHRAMLAAPAKKLDELLKDAGIEFGDPTLMEDDQGSEGFRAGFVSIIGSPNVGKSTLMNSLVGERVSIVTSKQQTTRHQIMGVVTGEDFQIVYYDTPGVLRPNYKLQEGMMAFVKESLGDADVVLLMTDVFEDPRDFPDQQIFEHMQQSRRPLLLAVNKIDLLPNATHPQGNLGKDALERVGTLQDVVARWQAALPNASIIPISAREYFNLDELLASLKEELPPSPPLYPNDTLTDKPQRFFASELIREKLFTSYSKEIPYSCEVSVTGFKDQGRLIKINSTIFTTRDSHVPILIGTKGSKLKEVGTQARLDLENFFGKKIYLEMRVKVRKDWRSNLKDLSAFGYMQQGGETENTKI Sbjct: 1 MEDYDDDEELSDQHRAMLAAPAKKLDELLKDAGIEFGDPTLMEDDQGSEGFRAGFVSIIGSPNVGKSTLMNSLVGERVSIVTSKQQTTRHQIMGVVTGEDFQIVYYDTPGVLRPNYKLQEGMMAFVKESLGDADVVLLMTDVFEDPRDFPDQQIFEHMQQSRRPLLLAVNKIDLLPNATHPQGNLGKDALERVGTLQDVVARWQAALPNASIIPISAREYFNLDELLASLKEELPPSPPLYPNDTLTDKPQRFFASELIREKLFTSYSKEIPYSCEVSVTGFKDQGRLIKINSTIFTTRDSHVPILIGTKGSKLKEVGTQARLDLENFFGKKIYLEMRVKVRKDWRSNLKDLSAFGYMQQGGETENTKI 369
BLAST of EWM30248.1 vs. NCBI_GenBank
Match: gi|1199693309|ref|WP_087424212.1| (GTPase Era [Barnesiella sp. An55] >gi|1198485152|gb|OUN72061.1| GTPase Era [Barnesiella sp. An55]) HSP 1 Score: 330.872 bits (847), Expect = 2.044e-109 Identity = 166/307 (54.07%), Postives = 213/307 (69.38%), Query Frame = 0 Query: 52 RAGFVSIIGSPNVGKSTLMNSLVGERVSIVTSKQQTTRHQIMGVVTGEDFQIVYYDTPGVLRPNYKLQEGMMAFVKESLGDADVVLLMTDVFEDPRDFPDQQIFEHMQQSRRPLLLAVNKIDLLPNATHPQGNLGKDALERVGTLQDVVARWQAALPNASIIPISAREYFNLDELLASLKEELPPSPPLYPNDTLTDKPQRFFASELIREKLFTSYSKEIPYSCEVSVTGFKDQGRLIKINSTIFTTRDSHVPILIGTKGSKLKEVGTQARLDLENFFGKKIYLEMRVKVRKDWRSNLKDLSAFGYM 358 +AGFV+I+G+PNVGKSTLMNSLVGER+SI+TSK QTTRH+IMG+V +D QIVY DTPGVL PNYKLQE M+ F + +L DAD++L +TDV E P +Q + + Q P+L+ +NKIDLL G++ALE +V W+ LP A +IP+SA+ FNLD LL ++E LPPSPP + D LTDKP RFF +E+IREK+ +Y KEIPY+CEV+V FK++ I I + I+ RDS I+IG GS LK+VG AR D+E FF KK++LE+ VKV KDWRS L FGYM Sbjct: 3 KAGFVNIVGNPNVGKSTLMNSLVGERISIITSKAQTTRHRIMGIVNTDDMQIVYSDTPGVLVPNYKLQESMLNFSQSALVDADILLYVTDVVETPTK--NQSFLDKVAQETVPVLVVINKIDLLQ---------GQEALE------SLVEEWKQLLPKAEVIPVSAQYKFNLDYLLKRIQELLPPSPPFFDKDALTDKPARFFVTEIIREKILLTYDKEIPYACEVAVEQFKEEEGRIHIMAVIYVERDSQKGIVIGKGGSALKKVGMLARKDIEAFFDKKVFLELYVKVEKDWRSRENKLKGFGYM 292
BLAST of EWM30248.1 vs. NCBI_GenBank
Match: gi|1199677401|ref|WP_087408802.1| (GTPase Era [Barnesiella sp. An22] >gi|1198614406|gb|OUO98008.1| GTPase Era [Barnesiella sp. An22]) HSP 1 Score: 330.872 bits (847), Expect = 2.384e-109 Identity = 166/307 (54.07%), Postives = 216/307 (70.36%), Query Frame = 0 Query: 52 RAGFVSIIGSPNVGKSTLMNSLVGERVSIVTSKQQTTRHQIMGVVTGEDFQIVYYDTPGVLRPNYKLQEGMMAFVKESLGDADVVLLMTDVFEDPRDFPDQQIFEHMQQSRRPLLLAVNKIDLLPNATHPQGNLGKDALERVGTLQDVVARWQAALPNASIIPISAREYFNLDELLASLKEELPPSPPLYPNDTLTDKPQRFFASELIREKLFTSYSKEIPYSCEVSVTGFKDQGRLIKINSTIFTTRDSHVPILIGTKGSKLKEVGTQARLDLENFFGKKIYLEMRVKVRKDWRSNLKDLSAFGYM 358 +AGFV+I+G+PNVGKSTLMNSLVGER+SI+TSK QTTRH+IMG+V +D QIVY DTPGVL PNYKLQE M+ F + +L DAD++L +TDV E P +Q + + + P+L+ +NKIDLL QG G+++LE++ V W+ LP A +IP+SA+ FNLD LL ++E LPPSPP + D LTDKP RFF +E+IREK+ +Y KEIPY+CEV+V FK++ I I + I+ RDS I+IG GS LK+VG AR D+E FF KK+YLE+ VKV KDWRS L FGY+ Sbjct: 3 KAGFVNIVGNPNVGKSTLMNSLVGERISIITSKAQTTRHRIMGIVNTDDMQIVYSDTPGVLVPNYKLQESMLNFSQSALVDADILLYVTDVIETPTK--NQSFLDKVAEETVPVLVVINKIDLL------QG--GQESLEKL------VEEWKRLLPKAEVIPVSAQYKFNLDYLLKRIQELLPPSPPFFDKDALTDKPARFFVTEIIREKILLTYDKEIPYACEVAVEQFKEEEGRIHIMAVIYVERDSQKGIIIGKGGSALKKVGMLARKDIEAFFDKKVYLELYVKVEKDWRSRENKLKGFGYI 293
BLAST of EWM30248.1 vs. NCBI_GenBank
Match: gi|524011894|emb|CCX95594.1| (gTPase Era [Bacteroides sp. CAG:20]) HSP 1 Score: 330.487 bits (846), Expect = 3.374e-109 Identity = 163/307 (53.09%), Postives = 211/307 (68.73%), Query Frame = 0 Query: 52 RAGFVSIIGSPNVGKSTLMNSLVGERVSIVTSKQQTTRHQIMGVVTGEDFQIVYYDTPGVLRPNYKLQEGMMAFVKESLGDADVVLLMTDVFEDPRDFPDQQIFEHMQQSRRPLLLAVNKIDLLPNATHPQGNLGKDALERVGTLQDVVARWQAALPNASIIPISAREYFNLDELLASLKEELPPSPPLYPNDTLTDKPQRFFASELIREKLFTSYSKEIPYSCEVSVTGFKDQGRLIKINSTIFTTRDSHVPILIGTKGSKLKEVGTQARLDLENFFGKKIYLEMRVKVRKDWRSNLKDLSAFGYM 358 +AGFV+I+G+PNVGKSTLMNSLVGER+SI+TSK QTTRH+IMG+V ED QIVY DTPGVL PNYKLQE M+ F + +L DAD++L +TDV E P +Q + + + P+L+ +NK+DLL + L+ +V W+ LPNA IIP+SA+ FNLD LL ++E LPPSPP + D LTDKP RFF +E+IREK+ +Y KEIPY+CEV+V F ++ I I + I+ RDS I+IG GS LK+VGT AR D+E FF KK++LE+ VKV KDWRS L FGY+ Sbjct: 3 KAGFVNIVGNPNVGKSTLMNSLVGERISIITSKAQTTRHRIMGIVNTEDMQIVYSDTPGVLVPNYKLQESMLNFSQSALLDADILLYVTDVVEAPAK--NQSFLDKVARETVPVLVVINKVDLLKEQS---------------VLETLVEEWKQLLPNAEIIPVSAQYKFNLDYLLKRIQELLPPSPPFFEKDALTDKPARFFVTEIIREKILQTYDKEIPYACEVAVEQFHEEENRIHIMAVIYVERDSQKGIVIGKGGSALKKVGTLARKDIEVFFDKKVFLELYVKVEKDWRSRENKLKGFGYI 292
BLAST of EWM30248.1 vs. NCBI_GenBank
Match: gi|644097235|ref|WP_025278407.1| (GTPase Era [Barnesiella viscericola] >gi|570741705|gb|AHF12465.1| GTPase Era [Barnesiella viscericola DSM 18177]) HSP 1 Score: 330.487 bits (846), Expect = 3.416e-109 Identity = 165/307 (53.75%), Postives = 217/307 (70.68%), Query Frame = 0 Query: 52 RAGFVSIIGSPNVGKSTLMNSLVGERVSIVTSKQQTTRHQIMGVVTGEDFQIVYYDTPGVLRPNYKLQEGMMAFVKESLGDADVVLLMTDVFEDPRDFPDQQIFEHMQQSRRPLLLAVNKIDLLPNATHPQGNLGKDALERVGTLQDVVARWQAALPNASIIPISAREYFNLDELLASLKEELPPSPPLYPNDTLTDKPQRFFASELIREKLFTSYSKEIPYSCEVSVTGFKDQGRLIKINSTIFTTRDSHVPILIGTKGSKLKEVGTQARLDLENFFGKKIYLEMRVKVRKDWRSNLKDLSAFGYM 358 +AGFV+I+G+PNVGKSTLMNSLVGER+SI+TSK QTTRH+IMG+V +D QIVY DTPGVL PNYKLQE M+ F + +L DAD++L +TDV E P +Q + + + + P+L+ +NKIDLL QG G+++LE++ V W+ LP A +IP+SA+ FNLD LL ++E LPPSPP + D LTDKP RFF +E+IREK+ +Y KEIPY+CEV+V FK++ I I + I+ RDS I+IG G+ LK+VG AR D+E FF KK+YLE+ VKV KDWRS L FGY+ Sbjct: 3 KAGFVNIVGNPNVGKSTLMNSLVGERISIITSKAQTTRHRIMGIVNTDDMQIVYSDTPGVLVPNYKLQESMLNFSQSALVDADILLYVTDVIETPTK--NQSFLDKVAEEKVPVLVVINKIDLL------QG--GQESLEKL------VEEWKRLLPKAEVIPVSAQYKFNLDYLLKRIQELLPPSPPFFDKDALTDKPARFFVTEIIREKILLTYDKEIPYACEVAVEQFKEEEGRIHIMAVIYVERDSQKGIVIGKGGAALKKVGMLARKDIEAFFDKKVYLELYVKVEKDWRSRENKLRGFGYI 293
BLAST of EWM30248.1 vs. NCBI_GenBank
Match: gi|496136931|ref|WP_008861438.1| (GTPase Era [Barnesiella intestinihominis] >gi|404338769|gb|EJZ65214.1| GTP-binding protein Era [Barnesiella intestinihominis YIT 11860]) HSP 1 Score: 330.102 bits (845), Expect = 4.336e-109 Identity = 164/307 (53.42%), Postives = 211/307 (68.73%), Query Frame = 0 Query: 52 RAGFVSIIGSPNVGKSTLMNSLVGERVSIVTSKQQTTRHQIMGVVTGEDFQIVYYDTPGVLRPNYKLQEGMMAFVKESLGDADVVLLMTDVFEDPRDFPDQQIFEHMQQSRRPLLLAVNKIDLLPNATHPQGNLGKDALERVGTLQDVVARWQAALPNASIIPISAREYFNLDELLASLKEELPPSPPLYPNDTLTDKPQRFFASELIREKLFTSYSKEIPYSCEVSVTGFKDQGRLIKINSTIFTTRDSHVPILIGTKGSKLKEVGTQARLDLENFFGKKIYLEMRVKVRKDWRSNLKDLSAFGYM 358 +AGFV+I+G+PNVGKSTLMNSLVGER+SI+TSK QTTRH+IMG+V ED QIVY DTPGVL PNYKLQE M+ F + +L DAD++L +TDV E P +Q + + + P+L+ +NKIDLL + L+ +V W+ LPNA IIP+SA+ FNLD LL ++E LPPSPP + D LTDKP RFF +E+IREK+ +Y KEIPY+CEV+V F ++ I I + I+ RDS I+IG GS LK+VGT AR D+E FF KK++LE+ VKV KDWRS L FGY+ Sbjct: 3 KAGFVNIVGNPNVGKSTLMNSLVGERISIITSKAQTTRHRIMGIVNTEDMQIVYSDTPGVLVPNYKLQESMLNFSQSALLDADILLYVTDVVEAPAK--NQSFLDKVARETVPVLVVINKIDLLKEQSD---------------LEKLVEEWKQLLPNAEIIPVSAQYKFNLDYLLKRIQELLPPSPPFFEKDALTDKPARFFVTEIIREKILQTYDKEIPYACEVAVEQFHEEENHIDIMAVIYVERDSQKGIVIGKGGSALKKVGTLARKDIEVFFDKKVFLELYVKVEKDWRSRENKLKGFGYI 292
BLAST of EWM30248.1 vs. NCBI_GenBank
Match: gi|490457061|ref|WP_004327813.1| (GTPase Era [Alistipes putredinis] >gi|167658123|gb|EDS02253.1| ribosome biogenesis GTPase Era [Alistipes putredinis DSM 17216]) HSP 1 Score: 329.717 bits (844), Expect = 6.411e-109 Identity = 163/309 (52.75%), Postives = 217/309 (70.23%), Query Frame = 0 Query: 52 RAGFVSIIGSPNVGKSTLMNSLVGERVSIVTSKQQTTRHQIMGVVTGEDFQIVYYDTPGVLRPNYKLQEGMMAFVKESLGDADVVLLMTDVFEDPRDFPDQQIFEHMQQSRRPLLLAVNKIDLLPNATHPQGNLGKDALERVGTLQDVVARWQAALPNASIIPISAREYFNLDELLASLKEELPPSPPLYPNDTLTDKPQRFFASELIREKLFTSYSKEIPYSCEVSVTGFKDQGRLIKINSTIFTTRDSHVPILIGTKGSKLKEVGTQARLDLENFFGKKIYLEMRVKVRKDWRSNLKDLSAFGYMQQ 360 +AGFV+IIG+PNVGKSTLMN+LVGER+SI+TSK QTTRH+I+GVV+GEDFQIV+ DTPG+L+P+YKLQE MM FV ++ DADV+L +TD E D I E ++QS P L +NKIDL T P+ L+++V +WQA LP A+I+P+SARE FN+ L + E LP Y DTLTDK RFFASE+IREK+ +Y KEIPY CE+++ ++++ + +I++ I+ RDS ILIG KG KLK+VG QAR D+E F GKK++LE+ VKV ++WR N + L FGY Q+ Sbjct: 3 KAGFVNIIGNPNVGKSTLMNALVGERLSIITSKAQTTRHRILGVVSGEDFQIVFSDTPGILKPSYKLQESMMKFVTGAVNDADVILYVTDTVEQSDRSND--ILEKIRQSDIPTLAVINKIDL----TTPE------------KLEELVDKWQALLPAATIVPVSARENFNIKGLFDLILERLPEGEAFYSKDTLTDKTLRFFASEIIREKILRNYDKEIPYCCEIAIEAYREEPTIDRISAVIYVARDSQKGILIGHKGEKLKKVGQQAREDIEQFLGKKVFLELYVKVNENWRDNERQLKRFGYEQE 293
BLAST of EWM30248.1 vs. NCBI_GenBank
Match: gi|1082547781|gb|OFY82209.1| (GTPase Era [Bacteroidetes bacterium RIFCSPLOWO2_12_FULL_35_15]) HSP 1 Score: 329.717 bits (844), Expect = 6.624e-109 Identity = 162/307 (52.77%), Postives = 216/307 (70.36%), Query Frame = 0 Query: 52 RAGFVSIIGSPNVGKSTLMNSLVGERVSIVTSKQQTTRHQIMGVVTGEDFQIVYYDTPGVLRPNYKLQEGMMAFVKESLGDADVVLLMTDVFEDPRDFPDQQIFEHMQQSRRPLLLAVNKIDLLPNATHPQGNLGKDALERVGTLQDVVARWQAALPNASIIPISAREYFNLDELLASLKEELPPSPPLYPNDTLTDKPQRFFASELIREKLFTSYSKEIPYSCEVSVTGFKDQGRLIKINSTIFTTRDSHVPILIGTKGSKLKEVGTQARLDLENFFGKKIYLEMRVKVRKDWRSNLKDLSAFGYM 358 +AGFV+IIGSPNVGKSTLMN LVGER+SI+TSK QTTRH+IMG+V GEDFQIVY DTPGVL+PNYKLQE MM FV ++ DAD++L +TD++ED + D++I ++ ++ P+LL VNKIDL AT + L++ VA W+A +PNA +IP+SA E FN++ + + LP P Y D LTDKP++FF SE+IREK+ +Y KEIPYS EV V FK++ ++IKI + I RDS I+IG +G LK+VG +AR D+E F K+++LE+ VKV KDWR + L FGY+ Sbjct: 4 KAGFVNIIGSPNVGKSTLMNVLVGERLSIITSKAQTTRHRIMGIVNGEDFQIVYSDTPGVLKPNYKLQESMMEFVHTAITDADIMLFVTDIYEDVK--IDEKILHKIKNAKVPVLLLVNKIDL---ATQEK-------------LEEKVAYWKAEVPNAEVIPVSALEKFNVNYVFDRILALLPEGPGFYGKDELTDKPEKFFISEIIREKILMNYKKEIPYSVEVVVESFKEEEKIIKIRAEILVVRDSQKGIIIGHQGKALKKVGVEARKDMETFLQKQVFLELFVKVNKDWRDSDNQLKRFGYI 292
BLAST of EWM30248.1 vs. NCBI_GenBank
Match: gi|299471247|emb|CBN79102.1| (PEra, plastid Era GTPase [Ectocarpus siliculosus]) HSP 1 Score: 332.798 bits (852), Expect = 7.345e-109 Identity = 157/320 (49.06%), Postives = 229/320 (71.56%), Query Frame = 0 Query: 45 DQGSEGFRAGFVSIIGSPNVGKSTLMNSLVGERVSIVTSKQQTTRHQIMGVVTGEDFQIVYYDTPGVLRPNYKLQEGMMAFVKESLGDADVVLLMTDVFEDPRDFPDQQIFEHMQQSRRPLLLAVNKIDLLPN----ATHPQ--GNLGKDALERVGTLQDVVARWQAALPNASIIPISAREYFNLDELLASLKEELPPSPPLYPNDTLTDKPQRFFASELIREKLFTSYSKEIPYSCEVSVTGFKDQGRLIKINSTIFTTRDSHVPILIGTKGSKLKEVGTQARLDLENFFGKKIYLEMRVKVRKDWRSNLKDLSAFGYM 358 + +E FR G+V+I+GSPNVGKSTLMN+++G+R+SIVT K TTRH+I G++TG+DFQ++Y DTPGVL P Y L EGMM FV+E++GDAD +L +TD+FE +F + QIFE M + +P+++AVNK+DLLP+ P+ G L + VG+L+DV+ +W+ LP A+++PISA E N +L LK+ +P PPL+ D ++DKPQRFFA+E+IRE++F S+S+EIPYSCEV + FK++ I++TI +++S ++IG KG+K+KEVG +AR+ LE G ++ L + VKV K+WR L +GYM Sbjct: 64 SRAAEDFRTGYVTIVGSPNVGKSTLMNNMIGDRLSIVTPKAGTTRHRITGIMTGDDFQMIYQDTPGVLTPAYMLHEGMMNFVQEAMGDADAILFVTDLFET--EFANTQIFERMLAAGKPIVVAVNKVDLLPSDGKSGDGPERPGLLAASTQKEVGSLKDVLGKWEERLPGATVLPISALEGINTVDLAGELKKHIPEGPPLFGTDVMSDKPQRFFAAEIIREQIFGSFSQEIPYSCEVLLGKFKERMVETVIDATIVVSQESQKGMVIGKKGAKIKEVGIKARVALEEHLGTRVNLRLNVKVDKNWRRKKTSLKEYGYM 381
BLAST of EWM30248.1 vs. NCBI_GenBank
Match: gi|524766295|emb|CDE63008.1| (gTPase Era [Alistipes putredinis CAG:67] >gi|1124921903|gb|OKY93902.1| GTPase Era [Alistipes putredinis]) HSP 1 Score: 329.717 bits (844), Expect = 7.387e-109 Identity = 163/309 (52.75%), Postives = 217/309 (70.23%), Query Frame = 0 Query: 52 RAGFVSIIGSPNVGKSTLMNSLVGERVSIVTSKQQTTRHQIMGVVTGEDFQIVYYDTPGVLRPNYKLQEGMMAFVKESLGDADVVLLMTDVFEDPRDFPDQQIFEHMQQSRRPLLLAVNKIDLLPNATHPQGNLGKDALERVGTLQDVVARWQAALPNASIIPISAREYFNLDELLASLKEELPPSPPLYPNDTLTDKPQRFFASELIREKLFTSYSKEIPYSCEVSVTGFKDQGRLIKINSTIFTTRDSHVPILIGTKGSKLKEVGTQARLDLENFFGKKIYLEMRVKVRKDWRSNLKDLSAFGYMQQ 360 +AGFV+IIG+PNVGKSTLMN+LVGER+SI+TSK QTTRH+I+GVV+GEDFQIV+ DTPG+L+P+YKLQE MM FV ++ DADV+L +TD E D I E ++QS P L +NKIDL T P+ L+++V +WQA LP A+I+P+SARE FN+ L + E LP Y DTLTDK RFFASE+IREK+ +Y KEIPY CE+++ +K++ + +I++ I+ RDS ILIG KG KLK+VG QAR D+E F GKK++L++ VKV ++WR N + L FGY Q+ Sbjct: 3 KAGFVNIIGNPNVGKSTLMNALVGERLSIITSKAQTTRHRILGVVSGEDFQIVFSDTPGILKPSYKLQESMMKFVTGAVNDADVILYVTDTVEQSDRSND--ILEKIRQSDIPTLAVINKIDL----TTPE------------KLEELVDKWQALLPAATIVPVSARENFNIKGLFDLILERLPEGEAFYSKDTLTDKTLRFFASEIIREKILRNYDKEIPYCCEIAIEAYKEEPTIDRISAVIYVARDSQKGILIGHKGEKLKKVGQQAREDMEQFLGKKVFLQLYVKVNENWRDNERQLKRFGYEQE 293 The following BLAST results are available for this feature:
BLAST of EWM30248.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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