EWM30372.1, cds300 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM30372.1 vs. NCBI_GenBank
Match: gi|585113032|gb|EWM30372.1| (urate oxidase [Nannochloropsis gaditana]) HSP 1 Score: 636.721 bits (1641), Expect = 0.000e+0 Identity = 310/310 (100.00%), Postives = 310/310 (100.00%), Query Frame = 0 Query: 1 MSGFLGANCHGKGGVRLLKLHRQGDHHDFIQLTAQILLTGGVDEAFTKADNRNIVATDTVKNTVYILARRHQFASIEEFGIIIAKHFLAQYPAIVTKVDVQLVKDLWTRVVNKDSHGRIAQHNHAFIKVGPQTTHTHIVAEKVGGSVVVSVRSGIRSLILLKTTQSGFENFHRDEFRALGDTNDRLVGTSVDGEWSFSAATIASRPDYEALNKTVLDTLIDEFAGPADKGVYSVSVQQTLYDMGTGLLAKVPGVDKIELYMPNIHNIPVDLSKFRIENKDHSGKPDIFLPMDDPHGMIKAIIERPRGARL 310 MSGFLGANCHGKGGVRLLKLHRQGDHHDFIQLTAQILLTGGVDEAFTKADNRNIVATDTVKNTVYILARRHQFASIEEFGIIIAKHFLAQYPAIVTKVDVQLVKDLWTRVVNKDSHGRIAQHNHAFIKVGPQTTHTHIVAEKVGGSVVVSVRSGIRSLILLKTTQSGFENFHRDEFRALGDTNDRLVGTSVDGEWSFSAATIASRPDYEALNKTVLDTLIDEFAGPADKGVYSVSVQQTLYDMGTGLLAKVPGVDKIELYMPNIHNIPVDLSKFRIENKDHSGKPDIFLPMDDPHGMIKAIIERPRGARL Sbjct: 1 MSGFLGANCHGKGGVRLLKLHRQGDHHDFIQLTAQILLTGGVDEAFTKADNRNIVATDTVKNTVYILARRHQFASIEEFGIIIAKHFLAQYPAIVTKVDVQLVKDLWTRVVNKDSHGRIAQHNHAFIKVGPQTTHTHIVAEKVGGSVVVSVRSGIRSLILLKTTQSGFENFHRDEFRALGDTNDRLVGTSVDGEWSFSAATIASRPDYEALNKTVLDTLIDEFAGPADKGVYSVSVQQTLYDMGTGLLAKVPGVDKIELYMPNIHNIPVDLSKFRIENKDHSGKPDIFLPMDDPHGMIKAIIERPRGARL 310
BLAST of EWM30372.1 vs. NCBI_GenBank
Match: gi|299116481|emb|CBN76198.1| (urate oxidase [Ectocarpus siliculosus]) HSP 1 Score: 293.123 bits (749), Expect = 3.513e-95 Identity = 140/310 (45.16%), Postives = 195/310 (62.90%), Query Frame = 0 Query: 1 MSGFLGANCHGKGGVRLLKLHRQGDHHDFIQLTAQILLTGGVDEAFTKADNRNIVATDTVKNTVYILARRHQFASIEEFGIIIAKHFLAQYPAIVTKVDVQLVKDLWTRVVNKDSHGRIAQHNHAFIKVGPQTTHTHIVAEKVG-----GSVVVSVRSGIRSLILLKTTQSGFENFHRDEFRALGDTNDRLVGTSVDGEWSFSAATIASRPDYEALNKTVLDTLIDEFAGPADKGVYSVSVQQTLYDMGTGLLAKVPGVDKIELYMPNIHNIPVDLSKFRIENKDHSGKPDIFLPMDDPHGMIKAIIERP 305 M+ L +N HGKG VR+ K+ R+G H +Q +ILL G + AFT ADN I+ TDT KNTVY+LA+ F E+F II+AKHFLA YP +V + V + +D W RV DS G+ H+HAF+K GP ++ G G + + G++ L L KTTQS F NFH+D +L + DRL+GT +DGEW + + PD+ ++D L+++FAGPADKGVYS SVQ T + MG+ +LA VP V + YMPN+HN+P DL+K+ + N D +G P IF P+D+PHG+I+A ++RP Sbjct: 1 MAAVLASNHHGKGRVRVTKVIRRGPVHSVLQFNVEILLDGPTNAAFTAADNSLIIPTDTQKNTVYVLAKTTSFDCAEQFAIIVAKHFLATYPDLVHRCRVMVKEDTWKRVRTADSTGKTRDHDHAFLKAGPH----YLFGRSEGTRQPCGRISIRAFGGVKGLTLFKTTQSSFTNFHKDNNTSLPEAEDRLLGTCMDGEWEYD---VLRSPDFSGDRAKIIDVLVEQFAGPADKGVYSPSVQVTCFQMGSAVLATVPSVSECTFYMPNVHNLPFDLAKYGLVNADQTGLPHIFYPVDEPHGIIQATMKRP 303
BLAST of EWM30372.1 vs. NCBI_GenBank
Match: gi|813171488|ref|XP_012204499.1| (urate oxidase [Saprolegnia parasitica CBS 223.65] >gi|641530741|gb|KDO24853.1| urate oxidase [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 263.848 bits (673), Expect = 9.013e-84 Identity = 133/302 (44.04%), Postives = 195/302 (64.57%), Query Frame = 0 Query: 10 HGKGGVRLLKLHRQGDHHDFIQLTAQILLTGGVDEAFTKADNRNIVATDTVKNTVYILARRHQFASIEEFGIIIAKHFLAQYPAIVTKVDVQLVKDLWTRVVNKDSHGRIAQHNHAFIKVGPQTTHTHIVAE-KVGGSVVVSVRSGIRSLILLKTTQSGFENFHRDEFRALGDTNDRLVGTSVDGEWSFSAATIASRPDYEALNKTVLDTLIDEFAGPADKGVYSVSVQQTLYDMGTGLLAKVPGVDKIELYMPNIHNIPVDLSKFRIENKDHSGKPDIFLPMDDPHGMIKAIIERPRGARL 310 HGKG VRLLK+ R+ D H QL A++LL G +F DN ++ TDTVKNTV+ LA++H+F IEEF +I+AKHF+ +P+++ K V+LV+ W R+V KDS G H+HAF++ G +T H AE + G+V +++ SG L +LKTTQS F F +D++ L + DRLV +S+ W+++ + A V L+D FAGP+D GV S +VQ TL+ MG +LA++P + +IELYMPNIHN+P++L+ F + N G ++FLP D+PHGMI+A ++R +RL Sbjct: 10 HGKGRVRLLKVTRRPDMHLVTQLEAEVLLEGPDRASFVTGDNAAVLPTDTVKNTVHALAKKHEFGCIEEFALILAKHFVVAHPSVIHKTKVKLVETQWDRLVTKDSKGHARPHHHAFVQGGTETRHATATAELRANGTVDMTLASGFTGLKVLKTTQSSFVGFLKDQYTTLPEVPDRLVSSSISAHWAYATPEANA-----ATAAAVRAILLDVFAGPSDVGVASPAVQSTLFQMGEAVLARIPSICRIELYMPNIHNLPINLAHFGLPNLHPHG--EVFLPTDEPHGMIRATLQRSPTSRL 304
BLAST of EWM30372.1 vs. NCBI_GenBank
Match: gi|86558910|gb|ABD03938.1| (urate oxidase [Phytophthora parasitica] >gi|566012357|gb|ETI35268.1| urate oxidase [Phytophthora parasitica P1569] >gi|568007970|gb|ETL82195.1| urate oxidase [Phytophthora parasitica] >gi|568008033|gb|ETL82258.1| urate oxidase [Phytophthora parasitica] >gi|970636295|gb|KUF80972.1| Uricase [Phytophthora nicotianae] >gi|970657813|gb|KUF95650.1| Uricase [Phytophthora nicotianae]) HSP 1 Score: 260.381 bits (664), Expect = 2.501e-82 Identity = 134/297 (45.12%), Postives = 191/297 (64.31%), Query Frame = 0 Query: 10 HGKGGVRLLKLHRQGDHHDFIQLTAQILLTGG-VDEAFTKADNRNIVATDTVKNTVYILARRHQFASIEEFGIIIAKHFLAQYPAIVTKVDVQLVKDLWTRVVNKDSHGRIAQHNHAFIKVGPQTTHTHIVAEKVG-GSVVVSVRSGIRSLILLKTTQSGFENFHRDEFRALGDTNDRLVGTSVDGEWSFSAATIASRPDYEALNKTVLDTLIDEFAGPADKGVYSVSVQQTLYDMGTGLLAKVPGVDKIELYMPNIHNIPVDLSKFRIENKDHSGKPDIFLPMDDPHGMIKAIIER 304 HGKG VR+LK+ R + H IQL A++LL G A+ DN ++ TD+VKNTV++LA++H+FAS+E+FG+I+AKHF+ ++P I++ V+L + W RVV DS G+ H+HAF+ P + ++VA K G+ V+V+ G+ L +LKTTQS F +F RD+F L D DRLV T V WS++ I D+ A + + L++ FAGPAD GV S +VQ TLY MG +L K P V I++ MPNIHN P+DLS+F +N G ++FLP D+PHG+I A + R Sbjct: 10 HGKGRVRMLKVTRTPEKHSVIQLEAEVLLEGAPAASAYYDGDNGRVLPTDSVKNTVWVLAKKHEFASLEDFGVILAKHFVTKHPDIISVAKVKLFETPWQRVVVPDSKGKTRPHHHAFVSASPGFSTAYVVARKSAYGAPDVTVQGGVDGLKVLKTTQSSFVDFFRDDFTTLPDVPDRLVCTCVTATWSYTPDAIGG--DFVARVAEIKNVLLETFAGPADVGVSSPAVQFTLYKMGEAVLEKCPYVKDIKITMPNIHNNPIDLSRFGCKNIHPHG--EVFLPTDEPHGIISATMVR 302
BLAST of EWM30372.1 vs. NCBI_GenBank
Match: gi|669172693|ref|XP_008621695.1| (urate oxidase [Saprolegnia diclina VS20] >gi|530726638|gb|EQC24880.1| urate oxidase [Saprolegnia diclina VS20]) HSP 1 Score: 259.225 bits (661), Expect = 6.113e-82 Identity = 134/302 (44.37%), Postives = 196/302 (64.90%), Query Frame = 0 Query: 10 HGKGGVRLLKLHRQGDHHDFIQLTAQILLTGGVDEAFTKADNRNIVATDTVKNTVYILARRHQFASIEEFGIIIAKHFLAQYPAIVTKVDVQLVKDLWTRVVNKDSHGRIAQHNHAFIKVGPQTTHTHIVAE-KVGGSVVVSVRSGIRSLILLKTTQSGFENFHRDEFRALGDTNDRLVGTSVDGEWSFSAATIASRPDYEALNKTVLDTLIDEFAGPADKGVYSVSVQQTLYDMGTGLLAKVPGVDKIELYMPNIHNIPVDLSKFRIENKDHSGKPDIFLPMDDPHGMIKAIIERPRGARL 310 HGKG VRLLK+ R+ D H QL A++LL G +F DN ++ TDTVKNTV+ LA++H+F IEEF +I+AKHF+ +P+++ K V+LV+ W R+V KDS G H+HAF++ G +T H AE + G+V +++ SG L +LKTTQS F F +D++ L + DRLV +S+ W+++ T + A V TL+D FAGP+D GV S +VQ TL+ MG +L ++P + +IELYMPNIHN+P++L+ F + N G ++FLP D+PHGMI+A ++R +RL Sbjct: 10 HGKGRVRLLKVTRRPDMHLVTQLEAEVLLEGPDRASFVTGDNAAVLPTDTVKNTVHALAKKHEFGCIEEFALILAKHFVVAHPSVIHKTKVKLVETQWDRLVTKDSKGHARPHHHAFVQGGTETRHATATAELQANGTVDMTLASGFTGLKVLKTTQSSFVGFLKDQYTTLPEVPDRLVSSSISAHWAYATPTANA-----ATAAAVRATLLDVFAGPSDVGVASPAVQSTLFQMGEAVLQRIPSICRIELYMPNIHNLPLNLAHFGLPNLHPHG--EVFLPTDEPHGMIRATLQRSPASRL 304
BLAST of EWM30372.1 vs. NCBI_GenBank
Match: gi|675208203|ref|XP_008912986.1| (urate oxidase [Phytophthora parasitica INRA-310] >gi|566012424|gb|ETI35335.1| urate oxidase [Phytophthora parasitica P1569] >gi|568086790|gb|ETN01671.1| urate oxidase [Phytophthora parasitica INRA-310] >gi|570939903|gb|ETP05160.1| urate oxidase [Phytophthora parasitica CJ01A1]) HSP 1 Score: 260.766 bits (665), Expect = 8.000e-82 Identity = 134/297 (45.12%), Postives = 191/297 (64.31%), Query Frame = 0 Query: 10 HGKGGVRLLKLHRQGDHHDFIQLTAQILLTGG-VDEAFTKADNRNIVATDTVKNTVYILARRHQFASIEEFGIIIAKHFLAQYPAIVTKVDVQLVKDLWTRVVNKDSHGRIAQHNHAFIKVGPQTTHTHIVAEKVG-GSVVVSVRSGIRSLILLKTTQSGFENFHRDEFRALGDTNDRLVGTSVDGEWSFSAATIASRPDYEALNKTVLDTLIDEFAGPADKGVYSVSVQQTLYDMGTGLLAKVPGVDKIELYMPNIHNIPVDLSKFRIENKDHSGKPDIFLPMDDPHGMIKAIIER 304 HGKG VR+LK+ R + H IQL A++LL G A+ DN ++ TD+VKNTV++LA++H+FAS+E+FG+I+AKHF+ ++P I++ V+L + W RVV DS G+ H+HAF+ P + ++VA K G+ V+V+ G+ L +LKTTQS F +F RD+F L D DRLV T V WS++ I D+ A + + L++ FAGPAD GV S +VQ TLY MG +L K P V I++ MPNIHN P+DLS+F +N G ++FLP D+PHG+I A + R Sbjct: 64 HGKGRVRMLKVTRTPEKHSVIQLEAEVLLEGAPAASAYYDGDNGRVLPTDSVKNTVWVLAKKHEFASLEDFGVILAKHFVTKHPDIISVAKVKLFETPWQRVVVPDSKGKTRPHHHAFVSASPGFSTAYVVARKSAYGAPDVTVQGGVDGLKVLKTTQSSFVDFFRDDFTTLPDVPDRLVCTCVTATWSYTPDAIGG--DFVARVAEIKNVLLETFAGPADVGVSSPAVQFTLYKMGEAVLEKCPYVKDIKITMPNIHNNPIDLSRFGCKNIHPHG--EVFLPTDEPHGIISATMVR 356
BLAST of EWM30372.1 vs. NCBI_GenBank
Match: gi|1173956213|gb|OQS03059.1| (uricase [Thraustotheca clavata]) HSP 1 Score: 258.84 bits (660), Expect = 9.592e-82 Identity = 139/308 (45.13%), Postives = 194/308 (62.99%), Query Frame = 0 Query: 10 HGKGGVRLLK------LHRQGDHHDFIQLTAQILLTGGVDEAFTKADNRNIVATDTVKNTVYILARRHQFASIEEFGIIIAKHFLAQYPAIVTKVDVQLVKDLWTRVVNKDSHGRIAQHNHAFIKVGPQTTHTHIVAEKVG-GSVVVSVRSGIRSLILLKTTQSGFENFHRDEFRALGDTNDRLVGTSVDGEWSFSAATIASRPDYEALNKTVLDTLIDEFAGPADKGVYSVSVQQTLYDMGTGLLAKVPGVDKIELYMPNIHNIPVDLSKFRIENKDHSGKPDIFLPMDDPHGMIKAIIERPRGARL 310 HGKG VR LK + R D H Q TAQ+LL G +F DN ++ TDTVKNTV LA++H+F SIEE +I+AKHF+ +P ++ V+LV+ W R+V KD+ G++ H+HAF++ G ++ +T+ +A VG G + V++ G L +LKTTQS F F +D + L + DRLV +SV W +S+ T A+ D A V LI+ FAGP+D GV S +VQ TLY MG +L +VP V+KIELYMPNIHN+PV+L+ F + N G ++FLP D+PHGMI+ ++R ARL Sbjct: 10 HGKGRVRFLKGINLGQVTRLPDKHLVTQATAQVLLEGPDRSSFLTGDNCAVLPTDTVKNTVQALAKKHEFQSIEELALILAKHFVQAHPTVIHVAKVKLVEVQWDRLVTKDARGQLRPHHHAFVQGGTESRYTYAIARLVGNGKIDVTLAGGFTDLKVLKTTQSAFVGFLKDNYTTLPEVPDRLVSSSVSAHWEYSSPT-ATAQDAAA----VRSALIEAFAGPSDTGVASPAVQYTLYKMGEAVLQQVPLVNKIELYMPNIHNLPVNLAHFGLPNIHPHG--ELFLPTDEPHGMIRTTVQRSPNARL 310
BLAST of EWM30372.1 vs. NCBI_GenBank
Match: gi|1173943809|gb|OQR92616.1| (uricase [Achlya hypogyna]) HSP 1 Score: 256.529 bits (654), Expect = 6.472e-81 Identity = 133/304 (43.75%), Postives = 190/304 (62.50%), Query Frame = 0 Query: 1 MSGFLGANCHGKGGVRLLKLHRQGDHHDFIQLTAQILLTGGVDEAFTKADNRNIVATDTVKNTVYILARRHQFASIEEFGIIIAKHFLAQYPAIVTKVDVQLVKDLWTRVVNKDSHGRIAQHNHAFIKVGPQTTHTHIVAEKVGGSVVVSVRSGIRSLILLKTTQSGFENFHRDEFRALGDTNDRLVGTSVDGEWSFSAATIASRPDYEALNKTVLDTLIDEFAGPADKGVYSVSVQQTLYDMGTGLLAKVPGVDKIELYMPNIHNIPVDLSKFRIENKDHSGKPDIFLPMDDPHGMIKAIIER 304 MS + HGKG VRLLK+ R D H QL A++LL G +F DN ++ TDTVKNTV+ LA++H+FA IE F +++AKHF+ +P ++ K V+LV+ W R+V DS G++ H+HAF++ G +T +T A GGS+ +++ SG L +LKTTQS F F +D + L + DRLV +S+ W + + + A V L+D FAGP+D GV S +VQ TLY +G +L ++P V KIELYMPNIHN+P++LS F + N G ++FLP D+PHGMI+A + R Sbjct: 1 MSIEISHTEHGKGRVRLLKVTRLPDKHVVTQLEAEVLLEGPDRASFVTGDNAAVLPTDTVKNTVHALAKKHEFADIEAFAVLVAKHFVTLHPRVIHKTKVKLVETQWDRLVTADSSGQLRPHHHAFVQGGTETRYTCATATLRGGSIDLTLASGFTGLKVLKTTQSSFVGFLKDAYTTLPEVPDRLVSSSISAHWDYVTSHATA-----ADAAAVRSALLDAFAGPSDVGVASPAVQFTLYKLGEAVLQRLPRVAKIELYMPNIHNLPINLSHFGLPNVHPHG--EVFLPTDEPHGMIRATVVR 297
BLAST of EWM30372.1 vs. NCBI_GenBank
Match: gi|953496707|emb|CEG42307.1| (urate oxidase [Plasmopara halstedii]) HSP 1 Score: 253.447 bits (646), Expect = 1.196e-79 Identity = 132/297 (44.44%), Postives = 188/297 (63.30%), Query Frame = 0 Query: 10 HGKGGVRLLKLHRQGDHHDFIQLTAQILLTGGVD-EAFTKADNRNIVATDTVKNTVYILARRHQFASIEEFGIIIAKHFLAQYPAIVTKVDVQLVKDLWTRVVNKDSHGRIAQHNHAFIKVGPQTTHTHIVAEKVG-GSVVVSVRSGIRSLILLKTTQSGFENFHRDEFRALGDTNDRLVGTSVDGEWSFSAATIASRPDYEALNKTVLDTLIDEFAGPADKGVYSVSVQQTLYDMGTGLLAKVPGVDKIELYMPNIHNIPVDLSKFRIENKDHSGKPDIFLPMDDPHGMIKAIIER 304 HGKG VR+LK+ R H QL AQ+LL G + A+ DN +++ TD++KNTV++LA++H+FAS+E+FGII+A+HF+ ++P IV+ V+L + W R+V DS G + H+HAF+ P + + A K G V+V+ G+ L LKTTQS F NF RDEF L D DRLV T + W++ + T +R D+ + + L++ FAGPAD GV S +VQ TLY MG +L K V +I + MPNIHN P+DLS+F +N G ++FLP+D+PHG+I A I R Sbjct: 10 HGKGRVRMLKVTRTPAKHSVFQLEAQVLLEGALAASAYYDGDNSHVLPTDSIKNTVWVLAKKHEFASLEDFGIILAEHFVMKHPEIVSLAKVKLFEMPWERLVLPDSKGVMRPHHHAFVSASPGFSTATVTARKSKYGDPEVTVQGGVDGLKALKTTQSAFVNFLRDEFTTLEDAPDRLVSTCISSTWTYISET--TRGDFATKAAVIKNVLLETFAGPADVGVPSPAVQFTLYKMGEAVLEKCSYVKEITISMPNIHNNPIDLSRFGCKNIHPHG--EVFLPIDEPHGIISATIVR 302
BLAST of EWM30372.1 vs. NCBI_GenBank
Match: gi|695372301|ref|XP_009514777.1| (hypothetical protein PHYSODRAFT_477479 [Phytophthora sojae] >gi|348687688|gb|EGZ27502.1| hypothetical protein PHYSODRAFT_477479 [Phytophthora sojae]) HSP 1 Score: 252.292 bits (643), Expect = 2.826e-79 Identity = 129/297 (43.43%), Postives = 189/297 (63.64%), Query Frame = 0 Query: 10 HGKGGVRLLKLHRQGDHHDFIQLTAQILLTGG-VDEAFTKADNRNIVATDTVKNTVYILARRHQFASIEEFGIIIAKHFLAQYPAIVTKVDVQLVKDLWTRVVNKDSHGRIAQHNHAFIKVGPQTTHTHIVAEKVG-GSVVVSVRSGIRSLILLKTTQSGFENFHRDEFRALGDTNDRLVGTSVDGEWSFSAATIASRPDYEALNKTVLDTLIDEFAGPADKGVYSVSVQQTLYDMGTGLLAKVPGVDKIELYMPNIHNIPVDLSKFRIENKDHSGKPDIFLPMDDPHGMIKAIIER 304 HGKG VRLLK+ R + H +QL AQ+LL G A+ DN +++ TD+VKNTV++LA++H+FAS+E+FG+I+A HF+ ++P +++ V+L + W R+V DS G+ H+HAF+ G + ++VA K G+ V+V+ G+ L +LKTTQS F +F RDE+ L D DRLV T V WS++ D+ + + L++ FAGPAD GV S +VQ TLY MG +L P V I++ MPNIHN P+DLS+F +N G ++FLP+D+PHG+I A + R Sbjct: 10 HGKGRVRLLKVTRTPEKHSVVQLEAQVLLEGAPAASAYYDGDNGHVLPTDSVKNTVWVLAKKHEFASLEDFGVILATHFVTKHPDMISVAKVKLFETPWERLVVPDSKGQTRAHHHAFVSAGAGFSTAYVVARKSSRGAPEVTVQGGVDGLKVLKTTQSSFVDFFRDEYTTLPDVPDRLVSTCVTAAWSYTPGA----GDFASRAAEIKRVLLETFAGPADAGVPSPAVQFTLYKMGEAVLEACPYVKDIKITMPNIHNNPIDLSRFGCKNIHPHG--EVFLPIDEPHGIISATMVR 300 The following BLAST results are available for this feature:
BLAST of EWM30372.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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