rna234, rna234 (mRNA) Nannochloropsis gaditana

Overview
Namerna234
Unique Namerna234
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length990
Alignment locationCM002455.1:590530..592038 -

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Properties
Property NameValue
Productdidehydrogluconate reductase
Orig transcript idgnl|cribi|Naga_100100g4.8909.mrna
Orig protein idgnl|cribi|Naga_100100g4.8909
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002455.1supercontigCM002455.1:590530..592038 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100100g4gene223Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna234rna234-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM30441.1cds234Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna234 ID=rna234|Name=rna234|organism=Nannochloropsis gaditana|type=mRNA|length=990bp
ATGAAGATCTCAACTCTCTGTGTGCTGACGATGGGAATGGCAGCTGCTTC
TGCCTCGGTCTCATCCTTTTCTAGTAGCAGTAAACCGGCGAAGACCCTCT
CCACCGTGCCGCGTTTGGTGTCTAAAGTCCGCGGAGGAAATGACTCGCCC
GCGTCTATCGTTCCGCAGCCTCTTATGAAAGCCCCTGCGGATGCTTACAA
GACAGTCTTGGCTCTGGGAGTCAAGAAAGCCTGCCAACCTGCCAGTAAAA
TTCTCCTGCTCGGTGTGATGGCGGGGCTCCAGGTCGGTATCGGGGCGGCA
ATGGCCGTGGCCACCCTCGGAGGAGTTCCGTTAATGCAAGAACAGAATCC
CGCTCTCGCAAAACTGCTCTTCGGCATTGCGGGGCTCCCCTGCTCGCTGC
TCATGGTCATGGCGACGGGCGCAGAGCTCTTCACAGGCAATACTGCTGTG
GTAGGCACAGCGTTTTTCGAGGGCAAAATTTCCTTGCAGCAGCTTCTCAA
GTCCTGGTCTTGCTCTTACGCGGGCAACCTCATAGGGGGAGGATTGCTGG
CCCTTCTTTGCAACTACGCCGGGGTTTTCTCCCAGGCGGCAGGCACATTC
ACGGCTGTCGCTGATGCTAAGGCTGCTTTGCCCTTTGGGGTGGCGGTTGC
ACGCGGCATTATCTGTAATTGGCTGGTGTGCACTGCGGTCTGGGTCTCCA
CAGCGGCAGCCGATTTGGTCTCCAAAGCCGTGGCAACTCTCATGATTATC
ACCATCTTTGCCTCCTTGGGCTTCGAGCACTCGATTGCCAACATGTTCGT
AGGGCCTTTTGGCGCCATGCAAAAGACGTCGCGGACGGGGTTCGTCGCTT
TTTTCGTCAAAAACCTGGTGCCTGTGACGATTGGCAACATCCTCGGGGGT
TCCTTCTTGATGGCAGGAATGCAGCACCTCGCCTTTGGGGGCAGGGACAA
GACCTCCGCAACCACTACCCCCGTGAACAAACGAGAGTGA
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protein sequence of rna234

>rna234-protein ID=rna234-protein|Name=rna234|organism=Nannochloropsis gaditana|type=polypeptide|length=326bp
MLVHFSVVALFLFAAKLSRVGGQSDHAEPKEGNFRLQNGVEMPLVGFGTA
GLGDGEQLAPLYAILKGFRHIDTAQATEWYNEAAIAQSVDECGMAREKLF
LVTKVHPRYFGYERTLRSFNHSLAALRTSYVDLLLLHTSDCSDWTGLCEK
DSSRGTFFDAWRALESLYQKGQVKAIGVSNFNVEQLEALSSTAVVPIHVV
QNHMDPFKQDREVRAWCQARGVLYTGYSTLGTQWRPPGGQNPVLNHPVIQ
TLAQRHGVSPALLVLVWARQEGVAVIPRSSEAKHIDELARLLPKAKDRVQ
LVLSEDEMKQMQALDGVDGSNLRDEL
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mRNA from alignment at CM002455.1:590530..592038-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna234 ID=rna234|Name=rna234|organism=Nannochloropsis gaditana|type=mRNA|length=1509bp|location=Sequence derived from alignment at CM002455.1:590530..592038- (Nannochloropsis gaditana)
GAGGCTGCAGCGATGAGGTCTCGCCTCTTTTTCCTGCTGCATGGAAGCAA
CGAGCACCGGACTGGAAAGGGTAGAGGAACCTGCGGGTACTGCGCACACA
GCCTACCCTCCTCAAGCTTCTTTTTATTGCACACTTGCAGGTAAGCTGGT
TGTCTTCTCAAGTGGACACGCATTTTTGCCTGCAGGAGGTATTGTTCTGG
CAACTCATCACTCTTGAGGAAGAACGATAAATTTTTGTCAAGAAAATAAA
ACCAGTTTGGCAATGCTGGTTCATTTTTCCGTCGTTGCTTTGTTTTTGTT
TGCCGCAAAGTTGAGCCGAGTCGGCGGTCAAAGTGACCATGCAGAGCCAA
AGGAGGGTAATTTCAGGCTTCAGAACGGCGTGGAGATGCCTTTGGTTGGA
TTCGGCACGGCAGGTTTGGGGGACGGCGAGCAACTGGCCCCGCTGTACGC
GATCCTCAAGGGCTTTCGGGTACGTTGGTGAGTGCTTGTGCAGGCATGTC
ACAGTGGTTCACAACGTTGCTCGTGAGTTCGGGCAGACAGGATCAGTGAT
CAGGTGGAGCAAGTCGCCTGAGGACTAGTCCGCCGATATCTTACACTATG
CTCCATTTGTGTGACACATATCAAGCATATAGACACGGCCCAGGCTACTG
AATGGTACAATGAAGCAGCGATTGCCCAATCTGTGGATGAATGCGGAATG
GCGCGAGAGAAGCTCTTTCTCGTGACCAAAGTGCATCCCCGATATTTCGG
TTACGAAAGAACATTGCGTTCCTTCAACCATTCACTGGCCGCGCTCCGCA
CAAGCTACGTAGATCTGCTGCTCCTTCATACGTCTGACTGCTCGGACTGG
ACAGGCCTTTGTGAAAAAGACTCGAGTCGGGGTACCTTCTTCGACGCGTG
GAGAGCCCTGGAGAGCTTGTACCAGAAGGGGCAAGTGAAAGCCATAGGCG
TATCAAATTTCAATGTGGAACAACTGGAAGCTCTGTCGAGCACCGCTGTG
GTCCCCATCCACGTTGTGCAAAATCACATGGATCCATTCAAGCAGGACCG
AGAGGTCCGCGCTTGGTGCCAGGCCCGCGGCGTCCTCTACACAGGCTACT
CGACACTGGGGACACAGTGGCGACCGCCCGGCGGACAAAACCCCGTTTTA
AATCACCCCGTCATTCAGACCCTCGCGCAGCGCCACGGGGTCTCTCCCGC
CTTGCTAGTACTGGTTTGGGCGCGGCAAGAGGGCGTGGCCGTCATCCCTC
GCTCCTCGGAGGCGAAACACATCGATGAGCTGGCCCGATTGCTGCCCAAG
GCGAAAGATCGCGTCCAGTTGGTGCTGAGCGAGGACGAGATGAAGCAGAT
GCAGGCCTTGGACGGCGTGGATGGCTCGAACCTTCGGGATGAATTGTAAT
TTAAGCGTCTCAGGCCCAAAAATAGAGGGAAACAAGCACGGCCCACGAAA
GACCTGGTTTTCCTCTCCTTTTTTCTGGGAAACTAAATTGCGTTATCTGG
CGTTCGAAA
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Coding sequence (CDS) from alignment at CM002455.1:590530..592038-

>rna234 ID=rna234|Name=rna234|organism=Nannochloropsis gaditana|type=CDS|length=1962bp|location=Sequence derived from alignment at CM002455.1:590530..592038- (Nannochloropsis gaditana)
CATATAGACACGGCCCAGGCTACTGAATGGTACAATGAAGCAGCGATTGC
CCAATCTGTGGATGAATGCGGAATGGCGCGAGAGAAGCTCTTTCTCGTGA
CCAAAGTGCATCCCCGATATTTCGGTTACGAAAGAACATTGCGTTCCTTC
AACCATTCACTGGCCGCGCTCCGCACAAGCTACGTAGATCTGCTGCTCCT
TCATACGTCTGACTGCTCGGACTGGACAGGCCTTTGTGAAAAAGACTCGA
GTCGGGGTACCTTCTTCGACGCGTGGAGAGCCCTGGAGAGCTTGTACCAG
AAGGGGCAAGTGAAAGCCATAGGCGTATCAAATTTCAATGTGGAACAACT
GGAAGCTCTGTCGAGCACCGCTGTGGTCCCCATCCACGTTGTGCAAAATC
ACATGGATCCATTCAAGCAGGACCGAGAGGTCCGCGCTTGGTGCCAGGCC
CGCGGCGTCCTCTACACAGGCTACTCGACACTGGGGACACAGTGGCGACC
GCCCGGCGGACAAAACCCCGTTTTAAATCACCCCGTCATTCAGACCCTCG
CGCAGCGCCACGGGGTCTCTCCCGCCTTGCTAGTACTGGTTTGGGCGCGG
CAAGAGGGCGTGGCCGTCATCCCTCGCTCCTCGGAGGCGAAACACATCGA
TGAGCTGGCCCGATTGCTGCCCAAGGCGAAAGATCGCGTCCAGTTGGTGC
TGAGCGAGGACGAGATGAAGCAGATGCAGGCCTTGGACGGCGTGGATGGC
TCGAACCTTCGGGATGAATTGTAAATGCTGGTTCATTTTTCCGTCGTTGC
TTTGTTTTTGTTTGCCGCAAAGTTGAGCCGAGTCGGCGGTCAAAGTGACC
ATGCAGAGCCAAAGGAGGGTAATTTCAGGCTTCAGAACGGCGTGGAGATG
CCTTTGGTTGGATTCGGCACGGCAGGTTTGGGGGACGGCGAGCAACTGGC
CCCGCTGTACGCGATCCTCAAGGGCTTTCGGCATATAGACACGGCCCAGG
CTACTGAATGGTACAATGAAGCAGCGATTGCCCAATCTGTGGATGAATGC
GGAATGGCGCGAGAGAAGCTCTTTCTCGTGACCAAAGTGCATCCCCGATA
TTTCGGTTACGAAAGAACATTGCGTTCCTTCAACCATTCACTGGCCGCGC
TCCGCACAAGCTACGTAGATCTGCTGCTCCTTCATACGTCTGACTGCTCG
GACTGGACAGGCCTTTGTGAAAAAGACTCGAGTCGGGGTACCTTCTTCGA
CGCGTGGAGAGCCCTGGAGAGCTTGTACCAGAAGGGGCAAGTGAAAGCCA
TAGGCGTATCAAATTTCAATGTGGAACAACTGGAAGCTCTGTCGAGCACC
GCTGTGGTCCCCATCCACGTTGTGCAAAATCACATGGATCCATTCAAGCA
GGACCGAGAGGTCCGCGCTTGGTGCCAGGCCCGCGGCGTCCTCTACACAG
GCTACTCGACACTGGGGACACAGTGGCGACCGCCCGGCGGACAAAACCCC
GTTTTAAATCACCCCGTCATTCAGACCCTCGCGCAGCGCCACGGGGTCTC
TCCCGCCTTGCTAGTACTGGTTTGGGCGCGGCAAGAGGGCGTGGCCGTCA
TCCCTCGCTCCTCGGAGGCGAAACACATCGATGAGCTGGCCCGATTGCTG
CCCAAGGCGAAAGATCGCGTCCAGTTGGTGCTGAGCGAGGACGAGATGAA
GCAGATGCAGGCCTTGGACGGCGTGGATGGCTCGAACCTTCGGGATGAAT
TGTAAATGCTGGTTCATTTTTCCGTCGTTGCTTTGTTTTTGTTTGCCGCA
AAGTTGAGCCGAGTCGGCGGTCAAAGTGACCATGCAGAGCCAAAGGAGGG
TAATTTCAGGCTTCAGAACGGCGTGGAGATGCCTTTGGTTGGATTCGGCA
CGGCAGGTTTGGGGGACGGCGAGCAACTGGCCCCGCTGTACGCGATCCTC
AAGGGCTTTCGG
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Synonyms
Publications